RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C CSI1Q04368 295 aa5.05□□□□□ -1.6
CDC48YDL126C ALE1Q08548 619 aa5.05□□□□□ -1.6
CDC48YDL126C OSM1P21375 501 aaKnown RBP5.04□□□□□ -1.6
CDC48YDL126C THI4P32318 326 aa5.04□□□□□ -1.6
CDC48YDL126C NDE1P40215 560 aa5.04□□□□□ -1.6
CDC48YDL126C ESL1P40456 1118 aa5.04□□□□□ -1.6
CDC48YDL126C VIP1Q06685 1146 aaKnown RBP5.04□□□□□ -1.6
CDC48YDL126C CFT2Q12102 859 aaPredicted RBP5.04□□□□□ -1.6
CDC48YDL126C LSP1Q12230 341 aaKnown RBP5.04□□□□□ -1.6
CDC48YDL126C SRF1Q12516 437 aa5.04□□□□□ -1.6
CDC48YDL126C AMS1P22855 1083 aa5.04□□□□□ -1.6
CDC48YDL126C PEX6P33760 1030 aa5.04□□□□□ -1.6
CDC48YDL126C ALA1P40825 983 aaKnown RBP5.04□□□□□ -1.6
CDC48YDL126C YJR098CP47139 656 aa5.04□□□□□ -1.6
CDC48YDL126C YNR065CP53751 1116 aa5.04□□□□□ -1.6
CDC48YDL126C TIM11P81449 96 aaPredicted RBP5.04□□□□□ -1.6
CDC48YDL126C ETT1Q08421 412 aaKnown RBP5.04□□□□□ -1.6
CDC48YDL126C MPD2Q99316 277 aa5.04□□□□□ -1.6
CDC48YDL126C FUS1P11710 512 aa5.03□□□□□ -1.6
CDC48YDL126C MRP7P12687 371 aa5.03□□□□□ -1.6
CDC48YDL126C TOP3P13099 656 aa5.03□□□□□ -1.6
CDC48YDL126C MTC2P34246 357 aa5.03□□□□□ -1.6
CDC48YDL126C APE4P38821 490 aa5.03□□□□□ -1.6
CDC48YDL126C YAP1801P38856 637 aa5.03□□□□□ -1.6
CDC48YDL126C MPH1P40562 993 aa5.03□□□□□ -1.6
CDC48YDL126C BFA1P47113 574 aa5.03□□□□□ -1.6
CDC48YDL126C UBX4P54730 416 aa5.03□□□□□ -1.6
CDC48YDL126C RPS19AP07280 144 aaKnown RBP5.03□□□□□ -1.6
CDC48YDL126C RPS19BP07281 144 aaPredicted RBP5.03□□□□□ -1.6
CDC48YDL126C EFB1P32471 206 aaKnown RBP5.03□□□□□ -1.6
CDC48YDL126C DLD1P32891 587 aa5.03□□□□□ -1.6
CDC48YDL126C AFR1P33304 620 aa5.03□□□□□ -1.6
CDC48YDL126C MRP8P35719 219 aa5.03□□□□□ -1.6
CDC48YDL126C YNG2P38806 282 aaKnown RBP5.03□□□□□ -1.6
CDC48YDL126C SEC26P41810 973 aaKnown RBP5.03□□□□□ -1.6
CDC48YDL126C GPI8P49018 411 aa5.03□□□□□ -1.6
CDC48YDL126C SPC105P53148 917 aa5.03□□□□□ -1.6
CDC48YDL126C YGR016WP53209 190 aa5.03□□□□□ -1.6
CDC48YDL126C RMT2Q03305 412 aa5.03□□□□□ -1.6
CDC48YDL126C YDR341CQ05506 607 aaKnown RBP5.03□□□□□ -1.6
CDC48YDL126C MDM12Q92328 271 aa5.03□□□□□ -1.6
CDC48YDL126C RAS1P01119 309 aa5.02□□□□□ -1.61
CDC48YDL126C HSP60P19882 572 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C RAD24P32641 659 aa5.02□□□□□ -1.61
CDC48YDL126C PBY1P38254 753 aa5.02□□□□□ -1.61
CDC48YDL126C GDH3P39708 457 aa5.02□□□□□ -1.61
CDC48YDL126C INP51P40559 946 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C SEC27P41811 889 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C YBP2P53169 641 aa5.02□□□□□ -1.61
CDC48YDL126C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
CDC48YDL126C RAT1Q02792 1006 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C RCF1Q03713 159 aa5.02□□□□□ -1.61
CDC48YDL126C YDR306CQ06640 478 aa5.02□□□□□ -1.61
CDC48YDL126C GRC3Q07845 632 aa5.02□□□□□ -1.61
CDC48YDL126C HTS1P07263 546 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C SST2P11972 698 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C PLC1P32383 869 aa5.02□□□□□ -1.61
CDC48YDL126C NEM1P38757 446 aa5.02□□□□□ -1.61
CDC48YDL126C GGA2P38817 585 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C SPO1P53541 631 aa5.02□□□□□ -1.61
CDC48YDL126C UGO1Q03327 502 aa5.02□□□□□ -1.61
CDC48YDL126C YLR257WQ06146 321 aaKnown RBP5.02□□□□□ -1.61
CDC48YDL126C SDH5Q08230 162 aa5.02□□□□□ -1.61
CDC48YDL126C HBN1Q96VH4 193 aa5.02□□□□□ -1.61
CDC48YDL126C GAL1P04385 528 aa5.01□□□□□ -1.61
CDC48YDL126C CDC31P06704 161 aaKnown RBP5.01□□□□□ -1.61
CDC48YDL126C ANP1P32629 500 aa5.01□□□□□ -1.61
CDC48YDL126C SAP190P36123 1033 aa5.01□□□□□ -1.61
CDC48YDL126C PIM1P36775 1133 aa5.01□□□□□ -1.61
CDC48YDL126C YBR071WP38243 211 aa5.01□□□□□ -1.61
CDC48YDL126C MBP1P39678 833 aa5.01□□□□□ -1.61
CDC48YDL126C RNT1Q02555 471 aa5.01□□□□□ -1.61
CDC48YDL126C ERV41Q04651 352 aa5.01□□□□□ -1.61
CDC48YDL126C CIA1Q05583 330 aa5.01□□□□□ -1.61
CDC48YDL126C EAF1Q06337 982 aa5.01□□□□□ -1.61
CDC48YDL126C CDC19P00549 500 aaKnown RBP5.01□□□□□ -1.61
CDC48YDL126C SUP35P05453 685 aaKnown RBP5.01□□□□□ -1.61
CDC48YDL126C CMP2P14747 604 aa5.01□□□□□ -1.61
CDC48YDL126C KAR3P17119 729 aa5.01□□□□□ -1.61
CDC48YDL126C ABZ1P37254 787 aaPredicted RBP5.01□□□□□ -1.61
CDC48YDL126C NIT1P40447 199 aa5.01□□□□□ -1.61
CDC48YDL126C PTK2P47116 818 aaKnown RBP5.01□□□□□ -1.61
CDC48YDL126C YJR124CP47159 448 aa5.01□□□□□ -1.61
CDC48YDL126C PIP2P52960 996 aa5.01□□□□□ -1.61
CDC48YDL126C ERP6P53198 216 aa5.01□□□□□ -1.61
CDC48YDL126C HEL2Q05580 639 aaKnown RBP5.01□□□□□ -1.61
CDC48YDL126C SPO75Q07798 868 aa5.01□□□□□ -1.61
CDC48YDL126C UTP10P42945 1769 aaKnown RBP5.01□□□□□ -1.61
CDC48YDL126C EUG1P32474 517 aa5□□□□□ -1.61
CDC48YDL126C MOT2P34909 587 aaKnown RBP5□□□□□ -1.61
CDC48YDL126C NOP4P37838 685 aaKnown RBP5□□□□□ -1.61
CDC48YDL126C SIC1P38634 284 aa5□□□□□ -1.61
CDC48YDL126C CCC2P38995 1004 aa5□□□□□ -1.61
CDC48YDL126C PPT1P53043 513 aa5□□□□□ -1.61
CDC48YDL126C VID30P53076 958 aa5□□□□□ -1.61
CDC48YDL126C NCE103P53615 221 aa5□□□□□ -1.61
CDC48YDL126C PEX13P80667 386 aa5□□□□□ -1.61
CDC48YDL126C NAM8Q00539 523 aaKnown RBP5□□□□□ -1.61
CDC48YDL126C UTP5Q04177 643 aaKnown RBP5□□□□□ -1.61
CDC48YDL126C YPL191CQ08930 360 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms