RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W MTC3P53077 123 aa5.44□□□□□ -1.54
KIN28YDL108W PRP43P53131 767 aaKnown RBP5.44□□□□□ -1.54
KIN28YDL108W CDC48P25694 835 aaKnown RBP5.43□□□□□ -1.54
KIN28YDL108W VPS24P36095 224 aaKnown RBP5.43□□□□□ -1.54
KIN28YDL108W MUM2P38236 366 aa5.43□□□□□ -1.54
KIN28YDL108W TSL1P38427 1098 aaKnown RBP5.43□□□□□ -1.54
KIN28YDL108W CTH1P47976 325 aa5.43□□□□□ -1.54
KIN28YDL108W YDR341CQ05506 607 aaKnown RBP5.43□□□□□ -1.54
KIN28YDL108W NFU1P32860 256 aa5.42□□□□□ -1.54
KIN28YDL108W MNN1P39106 762 aa5.42□□□□□ -1.54
KIN28YDL108W GDH3P39708 457 aa5.42□□□□□ -1.54
KIN28YDL108W NPP2P39997 493 aa5.42□□□□□ -1.54
KIN28YDL108W YEN1P40028 759 aa5.42□□□□□ -1.54
KIN28YDL108W ALG2P43636 503 aa5.42□□□□□ -1.54
KIN28YDL108W ORC3P54790 616 aa5.42□□□□□ -1.54
KIN28YDL108W BUL2Q03758 920 aaKnown RBP5.42□□□□□ -1.54
KIN28YDL108W TY1B-AO13527 1196 aaKnown RBP5.41□□□□□ -1.54
KIN28YDL108W ETP1P38748 585 aaKnown RBP5.41□□□□□ -1.54
KIN28YDL108W YAP1801P38856 637 aa5.41□□□□□ -1.54
KIN28YDL108W YJR142WP47173 342 aa5.41□□□□□ -1.54
KIN28YDL108W SFB2P53953 876 aa5.41□□□□□ -1.54
KIN28YDL108W PKH1Q03407 766 aa5.41□□□□□ -1.54
KIN28YDL108W XYL2Q07993 356 aa5.41□□□□□ -1.54
KIN28YDL108W PHR1P05066 565 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
KIN28YDL108W RPC82P32349 654 aa5.4□□□□□ -1.54
KIN28YDL108W ABZ1P37254 787 aaPredicted RBP5.4□□□□□ -1.54
KIN28YDL108W POL12P38121 705 aaPredicted RBP5.4□□□□□ -1.54
KIN28YDL108W NIT3P49954 291 aa5.4□□□□□ -1.54
KIN28YDL108W IMH1Q06704 911 aaKnown RBP5.4□□□□□ -1.54
KIN28YDL108W YOR352WQ08816 343 aa5.4□□□□□ -1.54
KIN28YDL108W RIB2Q12362 591 aaKnown RBP5.4□□□□□ -1.54
KIN28YDL108W CYC1P00044 109 aaPredicted RBP5.39□□□□□ -1.55
KIN28YDL108W CYB2P00175 591 aa5.39□□□□□ -1.55
KIN28YDL108W INH1P01097 85 aa5.39□□□□□ -1.55
KIN28YDL108W ENA1P13587 1091 aa5.39□□□□□ -1.55
KIN28YDL108W CMP2P14747 604 aa5.39□□□□□ -1.55
KIN28YDL108W MSH2P25847 964 aa5.39□□□□□ -1.55
KIN28YDL108W SRP101P32916 621 aa5.39□□□□□ -1.55
KIN28YDL108W ECM21P38167 1117 aaKnown RBP5.39□□□□□ -1.55
KIN28YDL108W HOS2P53096 452 aaPredicted RBP5.39□□□□□ -1.55
KIN28YDL108W ENA2Q01896 1091 aa5.39□□□□□ -1.55
KIN28YDL108W SIZ1Q04195 904 aa5.39□□□□□ -1.55
KIN28YDL108W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
KIN28YDL108W APL5Q08951 932 aaKnown RBP5.39□□□□□ -1.55
KIN28YDL108W HSP42Q12329 375 aa5.39□□□□□ -1.55
KIN28YDL108W ENA5Q12691 1091 aa5.39□□□□□ -1.55
KIN28YDL108W RAD53P22216 821 aa5.38□□□□□ -1.55
KIN28YDL108W RFA1P22336 621 aaKnown RBP5.38□□□□□ -1.55
KIN28YDL108W JNM1P36224 373 aa5.38□□□□□ -1.55
KIN28YDL108W YBR238CP38330 731 aaKnown RBP5.38□□□□□ -1.55
KIN28YDL108W MSC2Q03455 724 aa5.38□□□□□ -1.55
KIN28YDL108W ATG16Q03818 150 aa5.38□□□□□ -1.55
KIN28YDL108W HEL2Q05580 639 aaKnown RBP5.38□□□□□ -1.55
KIN28YDL108W ENV7Q12003 364 aa5.38□□□□□ -1.55
KIN28YDL108W DFG16Q99234 619 aa5.38□□□□□ -1.55
KIN28YDL108W ENP1P38333 483 aaKnown RBP5.37□□□□□ -1.55
KIN28YDL108W DSS1P39112 969 aa5.37□□□□□ -1.55
KIN28YDL108W UBP12P39538 1254 aa5.37□□□□□ -1.55
KIN28YDL108W ZRG8P40021 1076 aa5.37□□□□□ -1.55
KIN28YDL108W FAF1P40546 346 aaPredicted RBP5.37□□□□□ -1.55
KIN28YDL108W TAF1P46677 1066 aa5.37□□□□□ -1.55
KIN28YDL108W SNO2P53823 222 aa5.37□□□□□ -1.55
KIN28YDL108W FOL1P53848 824 aa5.37□□□□□ -1.55
KIN28YDL108W CTF4Q01454 927 aa5.37□□□□□ -1.55
KIN28YDL108W SVL3Q03088 825 aaKnown RBP5.37□□□□□ -1.55
KIN28YDL108W UTP14Q04500 899 aaKnown RBP5.37□□□□□ -1.55
KIN28YDL108W PHM6Q05637 104 aa5.37□□□□□ -1.55
KIN28YDL108W CFT2Q12102 859 aaPredicted RBP5.37□□□□□ -1.55
KIN28YDL108W GAL10P04397 699 aa5.36□□□□□ -1.55
KIN28YDL108W MPH2P0CD99 609 aa5.36□□□□□ -1.55
KIN28YDL108W GSY1P23337 708 aa5.36□□□□□ -1.55
KIN28YDL108W BRF1P29056 596 aa5.36□□□□□ -1.55
KIN28YDL108W ELM1P32801 640 aa5.36□□□□□ -1.55
KIN28YDL108W GYP8P43570 497 aa5.36□□□□□ -1.55
KIN28YDL108W YKE2P52553 114 aa5.36□□□□□ -1.55
KIN28YDL108W MAL11P53048 616 aa5.36□□□□□ -1.55
KIN28YDL108W DAM1P53267 343 aa5.36□□□□□ -1.55
KIN28YDL108W VPS30Q02948 557 aa5.36□□□□□ -1.55
KIN28YDL108W UGO1Q03327 502 aa5.36□□□□□ -1.55
KIN28YDL108W NTG2Q08214 380 aa5.36□□□□□ -1.55
KIN28YDL108W YDL177CQ12257 170 aa5.36□□□□□ -1.55
KIN28YDL108W FOB1O13329 566 aa5.35□□□□□ -1.55
KIN28YDL108W NOT3P06102 836 aaKnown RBP5.35□□□□□ -1.55
KIN28YDL108W HSF1P10961 833 aa5.35□□□□□ -1.55
KIN28YDL108W MSM1P22438 575 aa5.35□□□□□ -1.55
KIN28YDL108W SPC29P33419 253 aa5.35□□□□□ -1.55
KIN28YDL108W PEX6P33760 1030 aa5.35□□□□□ -1.55
KIN28YDL108W SAS3P34218 831 aa5.35□□□□□ -1.55
KIN28YDL108W EMC3P36039 253 aa5.35□□□□□ -1.55
KIN28YDL108W PEA2P40091 420 aa5.35□□□□□ -1.55
KIN28YDL108W VID27P40157 782 aa5.35□□□□□ -1.55
KIN28YDL108W SEC27P41811 889 aaKnown RBP5.35□□□□□ -1.55
KIN28YDL108W DAS1P47005 663 aa5.35□□□□□ -1.55
KIN28YDL108W GPI8P49018 411 aa5.35□□□□□ -1.55
KIN28YDL108W PSP2P50109 593 aaKnown RBP5.35□□□□□ -1.55
KIN28YDL108W YGR012WP53206 393 aa5.35□□□□□ -1.55
KIN28YDL108W YGR283CP53336 341 aaPredicted RBP5.35□□□□□ -1.55
KIN28YDL108W SXM1Q04175 944 aaKnown RBP5.35□□□□□ -1.55
KIN28YDL108W GRC3Q07845 632 aa5.35□□□□□ -1.55
KIN28YDL108W NYV1Q12255 253 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms