RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W TOP3P13099 656 aa6.01□□□□□ -1.45
PTC1YDL006W THI4P32318 326 aa6.01□□□□□ -1.45
PTC1YDL006W YKR073CP36153 106 aa6.01□□□□□ -1.45
PTC1YDL006W YBR284WP38150 797 aa6.01□□□□□ -1.45
PTC1YDL006W LSB3P43603 459 aaKnown RBP6.01□□□□□ -1.45
PTC1YDL006W LPX1Q12405 387 aaKnown RBP6.01□□□□□ -1.45
PTC1YDL006W IQG1Q12280 1495 aa6.01□□□□□ -1.45
PTC1YDL006W MSH2P25847 964 aa6□□□□□ -1.45
PTC1YDL006W RFC5P38251 354 aa6□□□□□ -1.45
PTC1YDL006W TOS1P38288 455 aa6□□□□□ -1.45
PTC1YDL006W TSL1P38427 1098 aaKnown RBP6□□□□□ -1.45
PTC1YDL006W GIC1P38785 314 aa6□□□□□ -1.45
PTC1YDL006W YER158CP40095 573 aa6□□□□□ -1.45
PTC1YDL006W FOL2P51601 243 aaKnown RBP6□□□□□ -1.45
PTC1YDL006W SIZ1Q04195 904 aa6□□□□□ -1.45
PTC1YDL006W KIN2P13186 1147 aaKnown RBP5.99□□□□□ -1.45
PTC1YDL006W NPP1P25353 742 aa5.99□□□□□ -1.45
PTC1YDL006W CDC48P25694 835 aaKnown RBP5.99□□□□□ -1.45
PTC1YDL006W REC104P33323 182 aa5.99□□□□□ -1.45
PTC1YDL006W GDH3P39708 457 aa5.99□□□□□ -1.45
PTC1YDL006W TOK1P40310 691 aa5.99□□□□□ -1.45
PTC1YDL006W HFM1P51979 1187 aa5.99□□□□□ -1.45
PTC1YDL006W YKE2P52553 114 aa5.99□□□□□ -1.45
PTC1YDL006W OSW2Q12202 724 aa5.99□□□□□ -1.45
PTC1YDL006W YPR071WQ12346 211 aa5.99□□□□□ -1.45
PTC1YDL006W BUD3P25558 1636 aa5.99□□□□□ -1.45
PTC1YDL006W PUB1P32588 453 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45 RIP-Chip
PTC1YDL006W YAP1801P38856 637 aa5.98□□□□□ -1.45
PTC1YDL006W HSV2P50079 448 aaPredicted RBP5.98□□□□□ -1.45
PTC1YDL006W SDH1Q00711 640 aa5.98□□□□□ -1.45
PTC1YDL006W UGO1Q03327 502 aa5.98□□□□□ -1.45
PTC1YDL006W YBT1P32386 1661 aa5.98□□□□□ -1.45
PTC1YDL006W MNN1P39106 762 aa5.97□□□□□ -1.45
PTC1YDL006W NPP2P39997 493 aa5.97□□□□□ -1.45
PTC1YDL006W ALG2P43636 503 aa5.97□□□□□ -1.45
PTC1YDL006W MAL11P53048 616 aa5.97□□□□□ -1.45
PTC1YDL006W RSM24Q03976 319 aa5.97□□□□□ -1.45
PTC1YDL006W SRB8P25648 1427 aa5.97□□□□□ -1.45
PTC1YDL006W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
PTC1YDL006W BRE4Q07660 1125 aa5.96□□□□□ -1.46
PTC1YDL006W RIB2Q12362 591 aaKnown RBP5.96□□□□□ -1.46
PTC1YDL006W MDM12Q92328 271 aa5.96□□□□□ -1.46
PTC1YDL006W ARO1P08566 1588 aaKnown RBP5.96□□□□□ -1.46
PTC1YDL006W HSP78P33416 811 aa5.95□□□□□ -1.46
PTC1YDL006W ABZ1P37254 787 aaPredicted RBP5.95□□□□□ -1.46
PTC1YDL006W MSC2Q03455 724 aa5.95□□□□□ -1.46
PTC1YDL006W MMS1Q06211 1407 aa5.95□□□□□ -1.46
PTC1YDL006W TRM3Q07527 1436 aa5.95□□□□□ -1.46
PTC1YDL006W SSM4P40318 1319 aa5.95□□□□□ -1.46
PTC1YDL006W APL1P27351 700 aa5.94□□□□□ -1.46
PTC1YDL006W EMC3P36039 253 aa5.94□□□□□ -1.46
PTC1YDL006W ECM21P38167 1117 aaKnown RBP5.94□□□□□ -1.46
PTC1YDL006W NIT3P49954 291 aa5.94□□□□□ -1.46
PTC1YDL006W DAM1P53267 343 aa5.94□□□□□ -1.46
PTC1YDL006W NTG2Q08214 380 aa5.94□□□□□ -1.46
PTC1YDL006W BUD21Q08492 214 aaPredicted RBP5.94□□□□□ -1.46
PTC1YDL006W ENV7Q12003 364 aa5.94□□□□□ -1.46
PTC1YDL006W BNR1P40450 1375 aa5.93□□□□□ -1.46
PTC1YDL006W BNI1P41832 1953 aa5.93□□□□□ -1.46
PTC1YDL006W YSP2Q06681 1438 aa5.93□□□□□ -1.46
PTC1YDL006W GSY1P23337 708 aa5.93□□□□□ -1.46
PTC1YDL006W SPC29P33419 253 aa5.93□□□□□ -1.46
PTC1YDL006W ERT1P38140 529 aa5.93□□□□□ -1.46
PTC1YDL006W YGR283CP53336 341 aaPredicted RBP5.93□□□□□ -1.46
PTC1YDL006W YPR196WQ06595 470 aa5.93□□□□□ -1.46
PTC1YDL006W NOP14Q99207 810 aaKnown RBP5.93□□□□□ -1.46
PTC1YDL006W MPH2P0CD99 609 aa5.92□□□□□ -1.46
PTC1YDL006W RAD53P22216 821 aa5.92□□□□□ -1.46
PTC1YDL006W PEX6P33760 1030 aa5.92□□□□□ -1.46
PTC1YDL006W CTH1P47976 325 aa5.92□□□□□ -1.46
PTC1YDL006W INP52P50942 1183 aa5.92□□□□□ -1.46
PTC1YDL006W YGL081WP53156 320 aa5.92□□□□□ -1.46
PTC1YDL006W SFB2P53953 876 aa5.92□□□□□ -1.46
PTC1YDL006W ATP25Q03153 612 aa5.92□□□□□ -1.46
PTC1YDL006W XYL2Q07993 356 aa5.92□□□□□ -1.46
PTC1YDL006W YGR161W-CQ3E744 92 aa5.92□□□□□ -1.46
PTC1YDL006W LIP5P32875 414 aa5.91□□□□□ -1.46
PTC1YDL006W OMA1P36163 345 aa5.91□□□□□ -1.46
PTC1YDL006W GYP8P43570 497 aa5.91□□□□□ -1.46
PTC1YDL006W ALO1P54783 526 aaKnown RBP5.91□□□□□ -1.46
PTC1YDL006W PHR1P05066 565 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
PTC1YDL006W HSF1P10961 833 aa5.9□□□□□ -1.46
PTC1YDL006W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
PTC1YDL006W SNO2P53823 222 aa5.9□□□□□ -1.46
PTC1YDL006W REH1Q06709 432 aa5.9□□□□□ -1.46
PTC1YDL006W DOP1Q03921 1698 aa5.9□□□□□ -1.47
PTC1YDL006W RPP2AP05319 106 aaKnown RBP5.89□□□□□ -1.47
PTC1YDL006W RAI1P53063 387 aaKnown RBP5.89□□□□□ -1.47
PTC1YDL006W CDA1Q06702 301 aa5.89□□□□□ -1.47
PTC1YDL006W CYC1P00044 109 aaPredicted RBP5.88□□□□□ -1.47
PTC1YDL006W CMP2P14747 604 aa5.88□□□□□ -1.47
PTC1YDL006W RFA1P22336 621 aaKnown RBP5.88□□□□□ -1.47
PTC1YDL006W MEF1P25039 761 aa5.88□□□□□ -1.47
PTC1YDL006W YEL1P34225 687 aa5.88□□□□□ -1.47
PTC1YDL006W DSS1P39112 969 aa5.88□□□□□ -1.47
PTC1YDL006W YJR142WP47173 342 aa5.88□□□□□ -1.47
PTC1YDL006W YGR012WP53206 393 aa5.88□□□□□ -1.47
PTC1YDL006W NOG2P53742 486 aaKnown RBP5.88□□□□□ -1.47
PTC1YDL006W VPS30Q02948 557 aa5.88□□□□□ -1.47
PTC1YDL006W YDR514CQ04408 483 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms