RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C PGK1P00560 416 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C TRP2P00899 507 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C YBR284WP38150 797 aa1.68□□□□□ -2.14
MSH3YCR092C FUI1P38196 639 aa1.68□□□□□ -2.14
MSH3YCR092C PHO88P38264 188 aaPredicted RBP1.68□□□□□ -2.14
MSH3YCR092C PAN5P38787 379 aa1.68□□□□□ -2.14
MSH3YCR092C VPS4P52917 437 aa1.68□□□□□ -2.14
MSH3YCR092C RET3P53600 189 aa1.68□□□□□ -2.14
MSH3YCR092C RPS15Q01855 142 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C YDL124WQ07551 312 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C YOR131CQ12486 218 aa1.68□□□□□ -2.14
MSH3YCR092C RPL40AP0CH08 128 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C RPL40BP0CH09 128 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C IMG2P25642 146 aaPredicted RBP1.68□□□□□ -2.14
MSH3YCR092C CDC48P25694 835 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C RRN6P32786 894 aa1.68□□□□□ -2.14
MSH3YCR092C NUP133P36161 1157 aa1.68□□□□□ -2.14
MSH3YCR092C SKN7P38889 622 aa1.68□□□□□ -2.14
MSH3YCR092C VPS45P38932 577 aa1.68□□□□□ -2.14
MSH3YCR092C CSM2P40465 213 aa1.68□□□□□ -2.14
MSH3YCR092C MOB1P40484 314 aa1.68□□□□□ -2.14
MSH3YCR092C FOL1P53848 824 aa1.68□□□□□ -2.14
MSH3YCR092C PKH1Q03407 766 aa1.68□□□□□ -2.14
MSH3YCR092C RRN11Q04712 507 aa1.68□□□□□ -2.14
MSH3YCR092C UTP13Q05946 817 aaKnown RBP1.68□□□□□ -2.14
MSH3YCR092C KEL3Q08979 651 aaPredicted RBP1.68□□□□□ -2.14
MSH3YCR092C CET1O13297 549 aaPredicted RBP1.67□□□□□ -2.14
MSH3YCR092C TUB2P02557 457 aaKnown RBP1.67□□□□□ -2.14
MSH3YCR092C SWC3P31376 625 aa1.67□□□□□ -2.14
MSH3YCR092C MRX3P38172 270 aa1.67□□□□□ -2.14
MSH3YCR092C APN2P38207 520 aa1.67□□□□□ -2.14
MSH3YCR092C UBS1P38290 277 aa1.67□□□□□ -2.14
MSH3YCR092C THI6P41835 540 aa1.67□□□□□ -2.14
MSH3YCR092C SKP2P42843 763 aa1.67□□□□□ -2.14
MSH3YCR092C GYP8P43570 497 aa1.67□□□□□ -2.14
MSH3YCR092C SUM1P46676 1062 aa1.67□□□□□ -2.14
MSH3YCR092C MFM1Q02783 413 aa1.67□□□□□ -2.14
MSH3YCR092C ROD1Q02805 837 aa1.67□□□□□ -2.14
MSH3YCR092C MFB1Q04922 465 aa1.67□□□□□ -2.14
MSH3YCR092C IRC10Q08118 586 aa1.67□□□□□ -2.14
MSH3YCR092C MNL2Q12205 849 aa1.67□□□□□ -2.14
MSH3YCR092C YLL054CQ12244 843 aa1.67□□□□□ -2.14
MSH3YCR092C PCD1Q12524 340 aa1.67□□□□□ -2.14
MSH3YCR092C HOM2P13663 365 aaKnown RBP1.67□□□□□ -2.14
MSH3YCR092C MTF1P14908 341 aaKnown RBP1.67□□□□□ -2.14
MSH3YCR092C RNR3P21672 869 aaKnown RBP1.67□□□□□ -2.14
MSH3YCR092C PTP1P25044 335 aa1.67□□□□□ -2.14
MSH3YCR092C UTR4P32626 227 aa1.67□□□□□ -2.14
MSH3YCR092C YKL023WP36103 277 aaKnown RBP1.67□□□□□ -2.14
MSH3YCR092C GRX7P38068 203 aa1.67□□□□□ -2.14
MSH3YCR092C ECM21P38167 1117 aaKnown RBP1.67□□□□□ -2.14
MSH3YCR092C HXT5P38695 592 aa1.67□□□□□ -2.14
MSH3YCR092C PCF11P39081 626 aaPredicted RBP1.67□□□□□ -2.14
MSH3YCR092C ESL1P40456 1118 aa1.67□□□□□ -2.14
MSH3YCR092C NEO1P40527 1151 aa1.67□□□□□ -2.14
MSH3YCR092C SBE2P42223 864 aaKnown RBP1.67□□□□□ -2.14
MSH3YCR092C SEN54Q02825 467 aaPredicted RBP1.67□□□□□ -2.14
MSH3YCR092C MSH6Q03834 1242 aa1.67□□□□□ -2.14
MSH3YCR092C FOB1O13329 566 aa1.66□□□□□ -2.14
MSH3YCR092C RPS6AP0CX37 236 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C RPS6BP0CX38 236 aaPredicted RBP1.66□□□□□ -2.14
MSH3YCR092C PRP22P24384 1145 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C CSE1P33307 960 aa1.66□□□□□ -2.14
MSH3YCR092C PGM1P33401 570 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C LST4P34239 828 aa1.66□□□□□ -2.14
MSH3YCR092C BMH2P34730 273 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C YBR062CP38239 180 aa1.66□□□□□ -2.14
MSH3YCR092C PNT1P38969 423 aa1.66□□□□□ -2.14
MSH3YCR092C AIM9P40053 627 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C YIL092WP40497 633 aa1.66□□□□□ -2.14
MSH3YCR092C RSC1P53236 928 aa1.66□□□□□ -2.14
MSH3YCR092C CAF130P53280 1122 aaPredicted RBP1.66□□□□□ -2.14
MSH3YCR092C ZPR1P53303 486 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C ALO1P54783 526 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C TGL2P54857 326 aa1.66□□□□□ -2.14
MSH3YCR092C TDA6Q06466 467 aa1.66□□□□□ -2.14
MSH3YCR092C PSK2Q08217 1101 aa1.66□□□□□ -2.14
MSH3YCR092C DSE3Q08729 430 aa1.66□□□□□ -2.14
MSH3YCR092C SHM1P37292 490 aaPredicted RBP1.66□□□□□ -2.14
MSH3YCR092C MCX1P38323 520 aaPredicted RBP1.66□□□□□ -2.14
MSH3YCR092C YHR054CP38780 354 aa1.66□□□□□ -2.14
MSH3YCR092C AKR1P39010 764 aa1.66□□□□□ -2.14
MSH3YCR092C VID28P40547 921 aa1.66□□□□□ -2.14
MSH3YCR092C AZR1P50080 613 aa1.66□□□□□ -2.14
MSH3YCR092C VID30P53076 958 aa1.66□□□□□ -2.14
MSH3YCR092C DNL4Q08387 944 aaPredicted RBP1.66□□□□□ -2.14
MSH3YCR092C MSC6Q08818 692 aaKnown RBP1.66□□□□□ -2.14
MSH3YCR092C GIS3Q12418 502 aa1.66□□□□□ -2.14
MSH3YCR092C GPM1P00950 247 aaKnown RBP1.65□□□□□ -2.14
MSH3YCR092C HIS5P07172 385 aa1.65□□□□□ -2.14
MSH3YCR092C KAR1P11927 433 aa1.65□□□□□ -2.14
MSH3YCR092C HAP4P14064 554 aa1.65□□□□□ -2.14
MSH3YCR092C SAC7P17121 654 aa1.65□□□□□ -2.14
MSH3YCR092C YUR1P26725 428 aa1.65□□□□□ -2.14
MSH3YCR092C RAD24P32641 659 aa1.65□□□□□ -2.14
MSH3YCR092C SIS2P36024 562 aa1.65□□□□□ -2.14
MSH3YCR092C YMC2P38087 329 aa1.65□□□□□ -2.14
MSH3YCR092C RFT1P38206 574 aaPredicted RBP1.65□□□□□ -2.14
MSH3YCR092C VPS8P39702 1274 aa1.65□□□□□ -2.14
MSH3YCR092C IRC24P40580 263 aa1.65□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms