RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	YPR089W	O13585	888 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
PCA1	YBR295W	RDS1	P25611	832 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	SMC1	P32908	1225 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	RPT1	P33299	467 aa	Known RBP	4.93	□□□□□ -1.62
PCA1	YBR295W	OCT1	P35999	772 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	CTM1	P38818	585 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	PIK1	P39104	1066 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	MET10	P39692	1035 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	MDE1	P47095	244 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	YGR016W	P53209	190 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	SQS1	P53866	767 aa	Known RBP	4.93	□□□□□ -1.62
PCA1	YBR295W	TFB3	Q03290	321 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	RSM24	Q03976	319 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	STE23	Q06010	1027 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	TMA16	Q08687	178 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	NUP170	P38181	1502 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	TY3B-G	Q99315	1547 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	DOM34	P33309	386 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	PGM2	P37012	569 aa	Known RBP	4.93	□□□□□ -1.62
PCA1	YBR295W	CCT4	P39078	528 aa	Known RBP	4.93	□□□□□ -1.62
PCA1	YBR295W	GCV2	P49095	1034 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	YOL057W	Q08225	711 aa		4.93	□□□□□ -1.62
PCA1	YBR295W	YME1	P32795	747 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	MDJ1	P35191	511 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	VPS21	P36017	210 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	SET3	P36124	751 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	MNN2	P38069	597 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	APE4	P38821	490 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	MRX1	P40050	688 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	CKB1	P43639	278 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	VMA10	P48836	114 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	TBF1	Q02457	562 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	FCP1	Q03254	732 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	USA1	Q03714	838 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	FAP7	Q12055	197 aa	Predicted RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	MSH5	Q12175	901 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	IRC20	Q06554	1556 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	CAT8	P39113	1433 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	RPA190	P10964	1664 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	ALG1	P16661	449 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
PCA1	YBR295W	CBF2	P32504	956 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	AFG2	P32794	780 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	KTR2	P33550	425 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	FCY21	P40039	528 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	BNA6	P43619	295 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	MAL11	P53048	616 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
PCA1	YBR295W	LOT6	Q07923	191 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	TUS1	Q06412	1307 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	SUP45	P12385	437 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	DBP3	P20447	523 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	DIT1	P21623	536 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	VPS3	P23643	1011 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	DBP7	P36120	742 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	UIP5	P36137	443 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	BAP2	P38084	609 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	APT1	P49435	187 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	ALF1	P53904	254 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	ATP25	Q03153	612 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	CWC21	Q03375	135 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	YMR114C	Q04471	368 aa	Known RBP	4.92	□□□□□ -1.62
PCA1	YBR295W	OCA6	Q12454	224 aa		4.92	□□□□□ -1.62
PCA1	YBR295W	DNF1	P32660	1571 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	ENO2	P00925	437 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	ATE1	P16639	503 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	DAP2	P18962	818 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	VPS1	P21576	704 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	UBA1	P22515	1024 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	KRE2	P27809	442 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	SSO1	P32867	290 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	XRS2	P33301	854 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	UTP11	P34247	250 aa	Predicted RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	YKL023W	P36103	277 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	MRPL17	P36528	281 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	LSM12	P38828	187 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	OAF1	P39720	1047 aa	Predicted RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	MXR1	P40029	184 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	YJL070C	P40361	888 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	UBP6	P43593	499 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	YGL176C	P46945	554 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	YJR079W	P47126	109 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	PSP2	P50109	593 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	TEL2	P53038	688 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	ZIP2	P53061	704 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	HOL1	P53389	586 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	SHE9	Q04172	456 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	ADE13	Q05911	482 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	SEC10	Q06245	871 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	YLR177W	Q06251	628 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	ATP16	Q12165	160 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	MCM16	Q12262	181 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	NUP159	P40477	1460 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	PDR15	Q04182	1529 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	DRS2	P39524	1355 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	ATP4	P05626	244 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	ADE3	P07245	946 aa	Known RBP	4.91	□□□□□ -1.62
PCA1	YBR295W	GCN3	P14741	305 aa		4.91	□□□□□ -1.62
PCA1	YBR295W	NMT1	P14743	455 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 148.4 ms