RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W SIP5P40210 489 aaKnown RBP3.47□□□□□ -1.85
SWD3YBR175W HOS4P40480 1083 aa3.47□□□□□ -1.85
SWD3YBR175W OYE3P41816 400 aaPredicted RBP3.47□□□□□ -1.85
SWD3YBR175W RSC8P43609 557 aaKnown RBP3.47□□□□□ -1.85
SWD3YBR175W GUS1P46655 708 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SWD3YBR175W HNT2P49775 206 aa3.47□□□□□ -1.85
SWD3YBR175W PBP1P53297 722 aaKnown RBP3.47□□□□□ -1.85
SWD3YBR175W RCM1P53972 490 aa3.47□□□□□ -1.85
SWD3YBR175W RSA3Q05942 220 aaKnown RBP3.47□□□□□ -1.85
SWD3YBR175W MLC2Q06580 163 aa3.47□□□□□ -1.85
SWD3YBR175W HRK1Q08732 759 aaKnown RBP3.47□□□□□ -1.85
SWD3YBR175W HSC82P15108 705 aaKnown RBP3.46□□□□□ -1.86
SWD3YBR175W GFD2P25370 566 aaKnown RBP3.46□□□□□ -1.86
SWD3YBR175W KCC4P25389 1037 aa3.46□□□□□ -1.86
SWD3YBR175W SCT1P32784 759 aa3.46□□□□□ -1.86
SWD3YBR175W SPC29P33419 253 aa3.46□□□□□ -1.86
SWD3YBR175W YEL1P34225 687 aa3.46□□□□□ -1.86
SWD3YBR175W YKL133CP36066 463 aa3.46□□□□□ -1.86
SWD3YBR175W RRP8P38961 392 aaKnown RBP3.46□□□□□ -1.86
SWD3YBR175W OAF1P39720 1047 aaPredicted RBP3.46□□□□□ -1.86
SWD3YBR175W MPH1P40562 993 aa3.46□□□□□ -1.86
SWD3YBR175W DUG1P43616 481 aaKnown RBP3.46□□□□□ -1.86
SWD3YBR175W NIT2P47016 307 aa3.46□□□□□ -1.86
SWD3YBR175W PRP43P53131 767 aaKnown RBP3.46□□□□□ -1.86
SWD3YBR175W SNP1Q00916 300 aaPredicted RBP3.46□□□□□ -1.86
SWD3YBR175W YML131WQ03102 365 aa3.46□□□□□ -1.86
SWD3YBR175W CDA2Q06703 312 aa3.46□□□□□ -1.86
SWD3YBR175W PSR2Q07949 397 aa3.46□□□□□ -1.86
SWD3YBR175W PUS7Q08647 676 aaKnown RBP3.46□□□□□ -1.86
SWD3YBR175W YTM1Q12024 460 aaPredicted RBP3.46□□□□□ -1.86
SWD3YBR175W YVC1Q12324 675 aa3.46□□□□□ -1.86
SWD3YBR175W INH1P01097 85 aa3.45□□□□□ -1.86
SWD3YBR175W GAS1P22146 559 aaKnown RBP3.45□□□□□ -1.86
SWD3YBR175W PPH3P32345 308 aa3.45□□□□□ -1.86
SWD3YBR175W TOA1P32773 286 aa3.45□□□□□ -1.86
SWD3YBR175W THI80P35202 319 aa3.45□□□□□ -1.86
SWD3YBR175W YHL041WP38730 149 aa3.45□□□□□ -1.86
SWD3YBR175W QNS1P38795 714 aaKnown RBP3.45□□□□□ -1.86
SWD3YBR175W CKB2P38930 258 aa3.45□□□□□ -1.86
SWD3YBR175W SIT1P39980 628 aa3.45□□□□□ -1.86
SWD3YBR175W SAP185P40856 1058 aa3.45□□□□□ -1.86
SWD3YBR175W GZF3P42944 551 aaKnown RBP3.45□□□□□ -1.86
SWD3YBR175W TAF1P46677 1066 aa3.45□□□□□ -1.86
SWD3YBR175W UBA2P52488 636 aa3.45□□□□□ -1.86
SWD3YBR175W TAN1P53072 289 aaPredicted RBP3.45□□□□□ -1.86
SWD3YBR175W ORC3P54790 616 aa3.45□□□□□ -1.86
SWD3YBR175W EAR1Q03212 550 aa3.45□□□□□ -1.86
SWD3YBR175W PHM6Q05637 104 aa3.45□□□□□ -1.86
SWD3YBR175W DUS3Q06053 668 aaKnown RBP3.45□□□□□ -1.86
SWD3YBR175W YLR257WQ06146 321 aaKnown RBP3.45□□□□□ -1.86
SWD3YBR175W GUD1Q07729 489 aa3.45□□□□□ -1.86
SWD3YBR175W ESC8Q08119 714 aa3.45□□□□□ -1.86
SWD3YBR175W MLS1P30952 554 aa3.44□□□□□ -1.86
SWD3YBR175W DBF20P32328 564 aa3.44□□□□□ -1.86
SWD3YBR175W DAL3P32459 195 aa3.44□□□□□ -1.86
SWD3YBR175W AFG2P32794 780 aa3.44□□□□□ -1.86
SWD3YBR175W BLI1P35727 113 aa3.44□□□□□ -1.86
SWD3YBR175W JNM1P36224 373 aa3.44□□□□□ -1.86
SWD3YBR175W KTR4P38131 464 aa3.44□□□□□ -1.86
SWD3YBR175W ERT1P38140 529 aa3.44□□□□□ -1.86
SWD3YBR175W PCM1P38628 557 aaKnown RBP3.44□□□□□ -1.86
SWD3YBR175W GPP2P40106 250 aaKnown RBP3.44□□□□□ -1.86
SWD3YBR175W HIS6P40545 261 aa3.44□□□□□ -1.86
SWD3YBR175W PAP2P53632 584 aaKnown RBP3.44□□□□□ -1.86
SWD3YBR175W TPP1Q03796 238 aa3.44□□□□□ -1.86
SWD3YBR175W TRE1Q08919 783 aa3.44□□□□□ -1.86
SWD3YBR175W GNT1Q12096 491 aa3.44□□□□□ -1.86
SWD3YBR175W RMP1Q12530 201 aa3.44□□□□□ -1.86
SWD3YBR175W YOL087CQ99247 1116 aa3.44□□□□□ -1.86
SWD3YBR175W FOB1O13329 566 aa3.43□□□□□ -1.86
SWD3YBR175W YER152CP10356 443 aa3.43□□□□□ -1.86
SWD3YBR175W SAM35P14693 329 aa3.43□□□□□ -1.86
SWD3YBR175W ADP1P25371 1049 aa3.43□□□□□ -1.86
SWD3YBR175W MDL2P33311 773 aa3.43□□□□□ -1.86
SWD3YBR175W STO1P34160 861 aaKnown RBP3.43□□□□□ -1.86
SWD3YBR175W YRO2P38079 344 aa3.43□□□□□ -1.86
SWD3YBR175W MAL31P38156 614 aa3.43□□□□□ -1.86
SWD3YBR175W ALG3P38179 458 aa3.43□□□□□ -1.86
SWD3YBR175W RGD1P38339 666 aa3.43□□□□□ -1.86
SWD3YBR175W PEX7P39108 375 aa3.43□□□□□ -1.86
SWD3YBR175W MNT3P40549 630 aa3.43□□□□□ -1.86
SWD3YBR175W CAF16P43569 289 aa3.43□□□□□ -1.86
SWD3YBR175W GYP8P43570 497 aa3.43□□□□□ -1.86
SWD3YBR175W YNR063WP53749 607 aa3.43□□□□□ -1.86
SWD3YBR175W BUL2Q03758 920 aaKnown RBP3.43□□□□□ -1.86
SWD3YBR175W LCD1Q04377 747 aa3.43□□□□□ -1.86
SWD3YBR175W COG8Q04632 607 aa3.43□□□□□ -1.86
SWD3YBR175W SPP382Q06411 708 aaPredicted RBP3.43□□□□□ -1.86
SWD3YBR175W REH1Q06709 432 aa3.43□□□□□ -1.86
SWD3YBR175W SSP2Q08646 371 aa3.43□□□□□ -1.86
SWD3YBR175W YPL260WQ08977 551 aa3.43□□□□□ -1.86
SWD3YBR175W SNU66Q12420 587 aaPredicted RBP3.43□□□□□ -1.86
SWD3YBR175W PTC5Q12511 572 aa3.43□□□□□ -1.86
SWD3YBR175W RTP1Q12751 981 aa3.43□□□□□ -1.86
SWD3YBR175W ADE8P04161 214 aa3.42□□□□□ -1.86
SWD3YBR175W HMG1P12683 1054 aa3.42□□□□□ -1.86
SWD3YBR175W SRO9P25567 434 aaKnown RBP3.42□□□□□ -1.86
SWD3YBR175W HEM12P32347 362 aaPredicted RBP3.42□□□□□ -1.86
SWD3YBR175W MCM10P32354 571 aa3.42□□□□□ -1.86
SWD3YBR175W YBR238CP38330 731 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms