RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 METP08581 1390 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 ZNF165P49910 485 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 DNM1Q05193 864 aaKnown RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 CCDC70Q6NSX1 233 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 ABCA9Q8IUA7 1624 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 KIAA1210Q9ULL0 1709 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 IQGAP1P46940 1657 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 FAM177BA6PVY3 158 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 RNMTO43148 476 aaKnown RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 NEMFO60524 1076 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 SYT1P21579 422 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 CWF19L2Q2TBE0 894 aaKnown RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 FILIP1LQ4L180 1135 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 CREB3L3Q68CJ9 461 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 AIDAQ96BJ3 306 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 PRIMPOLQ96LW4 560 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 CCDC85AQ96PX6 553 aaPredicted RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 CLIP2Q9UDT6 1046 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 DYNC1I1O14576 645 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 DDX21Q9NR30 783 aaKnown RBP eCLIP10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 CCDC171Q6TFL3 1326 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 OFD1O75665 1012 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 PIP4K2AP48426 406 aaPredicted RBP10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 MED14O60244 1454 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 ZNF213O14771 459 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 GCP02774 474 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 SLC3A2P08195 630 aaKnown RBP10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 BRF1Q92994 677 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 FSD2A1L4K1 749 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 G3V3G9 751 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 CCT2P78371 535 aaKnown RBP10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 STX1AQ16623 288 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
HNRNPU-219ENST00000639628 HSPA4P34932 840 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 TDO2P48775 406 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 SLC39A6Q13433 755 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 DDX46Q7L014 1031 aaKnown RBP10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 FSIP1Q8NA03 581 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 TCEANC2Q96MN5 208 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 NPHP3Q7Z494 1330 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 SSH3Q8TE77 659 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 BRD1O95696 1058 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 TXLNAP40222 546 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 GUCY1B3Q02153 619 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
HNRNPU-219ENST00000639628 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 SFPQP23246 707 aaKnown RBP eCLIP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 PTPN14Q15678 1187 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 SMARCE1Q969G3 411 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 UBAC1Q9BSL1 405 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 BCL11BQ9C0K0 894 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 USP44Q9H0E7 712 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 PNPLA6Q8IY17 1366 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 CPSF1Q10570 1443 aaKnown RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 GOLGA8BA8MQT2 603 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 NBPF7P0C2Y1 421 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 IL15P40933 162 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 TEX13AQ9BXU3 409 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 IBTKQ9P2D0 1353 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 ZFYP08048 801 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 NOLC1Q14978 699 aaKnown RBP eCLIP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 CCAR1Q8IX12 1150 aaKnown RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 BICC1Q9H694 974 aaKnown RBP10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 DACT1Q9NYF0 836 aa10.03□□□□□ -0.8
HNRNPU-219ENST00000639628 EIF4A1P60842 406 aaKnown RBP10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 Q6ZUG5 572 aa10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 JARID2Q92833 1246 aaPredicted RBP10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 GSDMDP57764 484 aa10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 CEP131Q9UPN4 1083 aa10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 PPRC1Q5VV67 1664 aaKnown RBP10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 TTF1Q15361 905 aaPredicted RBP10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 IL17REQ8NFR9 667 aa10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 NAPBQ9H115 298 aa10.02□□□□□ -0.81
HNRNPU-219ENST00000639628 CCDC196A0A1B0GTZ2 297 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 ANKRD18BA2A2Z9 1011 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 LTKP29376 864 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 IGHMBP2P38935 993 aaKnown RBP10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 CFAP100Q494V2 611 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 NCOA7Q8NI08 942 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 ACBD3Q9H3P7 528 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 LGR6Q9HBX8 967 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 LRP2BPQ9P2M1 347 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 STAP2Q9UGK3 403 aa10.01□□□□□ -0.81
HNRNPU-219ENST00000639628 USP16Q9Y5T5 823 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms