RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 NMIQ13287 307 aaPredicted RBP12.77□□□□□ -0.36
NECAP1-216ENST00000639167 JAKMIP1Q96N16 626 aaKnown RBP12.77□□□□□ -0.36
NECAP1-216ENST00000639167 METTL22Q9BUU2 404 aaPredicted RBP12.77□□□□□ -0.36
NECAP1-216ENST00000639167 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.36
NECAP1-216ENST00000639167 RPAP1Q9BWH6 1393 aaPredicted RBP12.77□□□□□ -0.37
NECAP1-216ENST00000639167 ESPNB1AK53 854 aa12.77□□□□□ -0.37
NECAP1-216ENST00000639167 SNRPA1P09661 255 aaKnown RBP12.77□□□□□ -0.37
NECAP1-216ENST00000639167 CLCN1P35523 988 aa12.77□□□□□ -0.37
NECAP1-216ENST00000639167 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.37
NECAP1-216ENST00000639167 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
NECAP1-216ENST00000639167 LIMCH1Q9UPQ0 1083 aa12.77□□□□□ -0.37
NECAP1-216ENST00000639167 WDR33Q9C0J8 1336 aaKnown RBP12.77□□□□□ -0.37
NECAP1-216ENST00000639167 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
NECAP1-216ENST00000639167 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
NECAP1-216ENST00000639167 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
NECAP1-216ENST00000639167 TMEM132AQ24JP5 1023 aa12.76□□□□□ -0.37
NECAP1-216ENST00000639167 ANP32BQ92688 251 aaKnown RBP12.76□□□□□ -0.37
NECAP1-216ENST00000639167 GADD45BO75293 160 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-216ENST00000639167 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
NECAP1-216ENST00000639167 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 MBD3O95983 291 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 KCNJ4P48050 445 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 CABP4P57796 275 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 LRP10Q7Z4F1 713 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 CCDC83Q8IWF9 413 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 EDC3Q96F86 508 aaKnown RBP12.75□□□□□ -0.37
NECAP1-216ENST00000639167 PPP1R9BQ96SB3 815 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 FSD1Q9BTV5 496 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
NECAP1-216ENST00000639167 RBM8AQ9Y5S9 174 aaKnown RBP12.75□□□□□ -0.37
NECAP1-216ENST00000639167 COL18A1P39060 1754 aa12.75□□□□□ -0.37
NECAP1-216ENST00000639167 A0A0D9SFI3 127 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 USP48Q86UV5 1035 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 SMC3Q9UQE7 1217 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 COL9A3Q14050 684 aaPredicted RBP12.74□□□□□ -0.37
NECAP1-216ENST00000639167 NECTIN1Q15223 517 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 CREB3L3Q68CJ9 461 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
NECAP1-216ENST00000639167 TNS3Q68CZ2 1445 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 STRCP1A6NGW2 1772 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 SYT1P21579 422 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 ZSWIM6Q9HCJ5 1215 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 CNPY2Q9Y2B0 182 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
NECAP1-216ENST00000639167 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 STX6O43752 255 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 ZSCAN22P10073 491 aaPredicted RBP12.73□□□□□ -0.37
NECAP1-216ENST00000639167 TFCP2Q12800 502 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 VPS53Q5VIR6 699 aa12.73□□□□□ -0.37
NECAP1-216ENST00000639167 A0A087WZG4 1122 aa12.72□□□□□ -0.37
NECAP1-216ENST00000639167 HIP1O00291 1037 aa12.72□□□□□ -0.37
NECAP1-216ENST00000639167 ZKSCAN1P17029 563 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-216ENST00000639167 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-216ENST00000639167 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
NECAP1-216ENST00000639167 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
NECAP1-216ENST00000639167 KCNB2Q92953 911 aa12.72□□□□□ -0.37
NECAP1-216ENST00000639167 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
NECAP1-216ENST00000639167 SLC27A2O14975 620 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 GJB2P29033 226 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 ST3GAL1Q11201 340 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 ZNF589Q86UQ0 364 aaPredicted RBP12.71□□□□□ -0.37
NECAP1-216ENST00000639167 CADPS2Q86UW7 1296 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 RNF214Q8ND24 703 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 TCEANC2Q96MN5 208 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 TM6SF1Q9BZW5 370 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 COPRSQ9NQ92 184 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.37
NECAP1-216ENST00000639167 CCDC9Q9Y3X0 531 aaKnown RBP12.71□□□□□ -0.37
NECAP1-216ENST00000639167 TAF6LQ9Y6J9 622 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 HSPA2P54652 639 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 ME3Q16798 604 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
NECAP1-216ENST00000639167 TCHHQ07283 1943 aa12.7□□□□□ -0.38
NECAP1-216ENST00000639167 MRC1P22897 1456 aa12.7□□□□□ -0.38
NECAP1-216ENST00000639167 F13A1P00488 732 aa12.7□□□□□ -0.38
NECAP1-216ENST00000639167 CHGBP05060 677 aa12.7□□□□□ -0.38
NECAP1-216ENST00000639167 NAP1L5Q96NT1 182 aaPredicted RBP12.7□□□□□ -0.38
NECAP1-216ENST00000639167 DNAJC2Q99543 621 aaKnown RBP12.7□□□□□ -0.38
NECAP1-216ENST00000639167 DBNDD2Q9BQY9 259 aa12.7□□□□□ -0.38
NECAP1-216ENST00000639167 TPCN1Q9ULQ1 816 aa12.7□□□□□ -0.38
NECAP1-216ENST00000639167 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
NECAP1-216ENST00000639167 DCCP43146 1447 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 FIBPO43427 364 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 NBPF14Q5TI25 921 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
NECAP1-216ENST00000639167 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 TTLL7Q6ZT98 887 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-216ENST00000639167 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-216ENST00000639167 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
NECAP1-216ENST00000639167 MED23Q9ULK4 1368 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms