RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 ZSCAN29Q8IWY8 852 aaPredicted RBP10.7□□□□□ -0.7
FAM49B-230ENST00000639004 GJD3Q8N144 294 aa10.7□□□□□ -0.7
FAM49B-230ENST00000639004 PIK3R5Q8WYR1 880 aa10.7□□□□□ -0.7
FAM49B-230ENST00000639004 GMCL1Q96IK5 515 aa10.7□□□□□ -0.7
FAM49B-230ENST00000639004 FAM129BQ96TA1 746 aa10.7□□□□□ -0.7
FAM49B-230ENST00000639004 BRD7Q9NPI1 651 aa10.7□□□□□ -0.7
FAM49B-230ENST00000639004 RTCBQ9Y3I0 505 aaKnown RBP10.7□□□□□ -0.7
FAM49B-230ENST00000639004 PCDHGC4Q9Y5F7 938 aa10.7□□□□□ -0.7
FAM49B-230ENST00000639004 EFSO43281 561 aa10.68□□□□□ -0.7
FAM49B-230ENST00000639004 IGHA2P01877 340 aa10.68□□□□□ -0.7
FAM49B-230ENST00000639004 USP5P45974 858 aa10.68□□□□□ -0.7
FAM49B-230ENST00000639004 NPAS4Q8IUM7 802 aa10.68□□□□□ -0.7
FAM49B-230ENST00000639004 FOXD4L4Q8WXT5 416 aaPredicted RBP10.68□□□□□ -0.7
FAM49B-230ENST00000639004 NDFIP2Q9NV92 336 aa10.68□□□□□ -0.7
FAM49B-230ENST00000639004 KCNMB2Q9Y691 235 aa10.68□□□□□ -0.7
FAM49B-230ENST00000639004 DCDC2BA2VCK2 349 aa10.67□□□□□ -0.7
FAM49B-230ENST00000639004 EPB42P16452 691 aa10.67□□□□□ -0.7
FAM49B-230ENST00000639004 PCSK2P16519 638 aa10.67□□□□□ -0.7
FAM49B-230ENST00000639004 CMTR1Q8N1G2 835 aaKnown RBP10.67□□□□□ -0.7
FAM49B-230ENST00000639004 TMC1Q8TDI8 760 aa10.67□□□□□ -0.7
FAM49B-230ENST00000639004 GGNBP2Q9H3C7 697 aa10.67□□□□□ -0.7
FAM49B-230ENST00000639004 KHNYNO15037 678 aaKnown RBP10.66□□□□□ -0.7
FAM49B-230ENST00000639004 GPR182O15218 404 aa10.66□□□□□ -0.7
FAM49B-230ENST00000639004 BNIP3LO60238 219 aa10.66□□□□□ -0.7
FAM49B-230ENST00000639004 KCNQ4P56696 695 aa10.66□□□□□ -0.7
FAM49B-230ENST00000639004 TNP2Q05952 138 aa10.66□□□□□ -0.7
FAM49B-230ENST00000639004 PDE3BQ13370 1112 aa10.66□□□□□ -0.7
FAM49B-230ENST00000639004 TRIP4Q15650 581 aaPredicted RBP10.66□□□□□ -0.7
FAM49B-230ENST00000639004 GTPBP3Q969Y2 492 aaKnown RBP10.66□□□□□ -0.7
FAM49B-230ENST00000639004 HCN2Q9UL51 889 aa10.66□□□□□ -0.7
FAM49B-230ENST00000639004 A6NHS1 94 aa10.65□□□□□ -0.7
FAM49B-230ENST00000639004 RPLP1P05386 114 aaKnown RBP10.65□□□□□ -0.7
FAM49B-230ENST00000639004 MAPTP10636 758 aaKnown RBP10.65□□□□□ -0.7
FAM49B-230ENST00000639004 SFSWAPQ12872 951 aaKnown RBP10.65□□□□□ -0.7
FAM49B-230ENST00000639004 DMRTB1Q96MA1 342 aa10.65□□□□□ -0.7
FAM49B-230ENST00000639004 CDC14CA4D256 554 aa10.64□□□□□ -0.71
FAM49B-230ENST00000639004 TREHO43280 583 aa10.64□□□□□ -0.71
FAM49B-230ENST00000639004 C8orf34Q49A92 452 aa10.64□□□□□ -0.71
FAM49B-230ENST00000639004 ABHD17AQ96GS6 310 aa10.64□□□□□ -0.71
FAM49B-230ENST00000639004 STRN4Q9NRL3 753 aa10.64□□□□□ -0.71
FAM49B-230ENST00000639004 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
FAM49B-230ENST00000639004 LAMC2Q13753 1193 aa10.63□□□□□ -0.71
FAM49B-230ENST00000639004 VWA5B2Q8N398 1253 aa10.63□□□□□ -0.71
FAM49B-230ENST00000639004 NANOS1Q8WY41 292 aaKnown RBP10.63□□□□□ -0.71
FAM49B-230ENST00000639004 UBAP1LF5GYI3 381 aa10.62□□□□□ -0.71
FAM49B-230ENST00000639004 EHHADHQ08426 723 aa10.62□□□□□ -0.71
FAM49B-230ENST00000639004 DSC3Q14574 896 aa10.62□□□□□ -0.71
FAM49B-230ENST00000639004 ALKBH8Q96BT7 664 aaKnown RBP10.62□□□□□ -0.71
FAM49B-230ENST00000639004 NXF1Q9UBU9 619 aaKnown RBP10.62□□□□□ -0.71
FAM49B-230ENST00000639004 ATXN7L1Q9ULK2 861 aaPredicted RBP10.62□□□□□ -0.71
FAM49B-230ENST00000639004 FNDC3AQ9Y2H6 1198 aaKnown RBP10.62□□□□□ -0.71
FAM49B-230ENST00000639004 GPR25O00155 361 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 XYLBO75191 536 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 EGFRP00533 1210 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 FMR1Q06787 632 aaKnown RBP eCLIP10.61□□□□□ -0.71
FAM49B-230ENST00000639004 GRIN2CQ14957 1233 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 SV2AQ7L0J3 742 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 TTC16Q8NEE8 873 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 NIF3L1Q9GZT8 377 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 C11orf16Q9NQ32 467 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 MARK1Q9P0L2 795 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 AMOTL2Q9Y2J4 779 aa10.61□□□□□ -0.71
FAM49B-230ENST00000639004 VEGFBP49765 207 aa10.6□□□□□ -0.71
FAM49B-230ENST00000639004 COL19A1Q14993 1142 aa10.6□□□□□ -0.71
FAM49B-230ENST00000639004 XKR5Q6UX68 686 aa10.6□□□□□ -0.71
FAM49B-230ENST00000639004 P4HBP07237 508 aaKnown RBP10.59□□□□□ -0.71
FAM49B-230ENST00000639004 CD33P20138 364 aa10.59□□□□□ -0.71
FAM49B-230ENST00000639004 PLCB3Q01970 1234 aa10.59□□□□□ -0.71
FAM49B-230ENST00000639004 ZNF787Q6DD87 383 aa10.59□□□□□ -0.71
FAM49B-230ENST00000639004 PDE12Q6L8Q7 609 aaKnown RBP10.59□□□□□ -0.71
FAM49B-230ENST00000639004 FOXR1Q6PIV2 292 aa10.59□□□□□ -0.71
FAM49B-230ENST00000639004 TRERF1Q96PN7 1200 aa10.59□□□□□ -0.71
FAM49B-230ENST00000639004 PHF24Q9UPV7 400 aa10.59□□□□□ -0.71
FAM49B-230ENST00000639004 FGFR3P22607 806 aa10.58□□□□□ -0.72
FAM49B-230ENST00000639004 ZNF438Q7Z4V0 828 aa10.58□□□□□ -0.72
FAM49B-230ENST00000639004 FBXO33Q7Z6M2 555 aa10.58□□□□□ -0.72
FAM49B-230ENST00000639004 GSX2Q9BZM3 304 aa10.58□□□□□ -0.72
FAM49B-230ENST00000639004 H3BM21 787 aa10.57□□□□□ -0.72
FAM49B-230ENST00000639004 CCINQ13939 588 aa10.57□□□□□ -0.72
FAM49B-230ENST00000639004 NPAS3Q8IXF0 933 aa10.57□□□□□ -0.72
FAM49B-230ENST00000639004 SLC30A3Q99726 388 aa10.57□□□□□ -0.72
FAM49B-230ENST00000639004 BCL2L13Q9BXK5 485 aa10.57□□□□□ -0.72
FAM49B-230ENST00000639004 ELP3Q9H9T3 547 aa10.57□□□□□ -0.72
FAM49B-230ENST00000639004 TMEM63CQ9P1W3 806 aa10.57□□□□□ -0.72
FAM49B-230ENST00000639004 SPEM2Q0P670 501 aa10.56□□□□□ -0.72
FAM49B-230ENST00000639004 EAPPQ56P03 285 aaPredicted RBP10.56□□□□□ -0.72
FAM49B-230ENST00000639004 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
FAM49B-230ENST00000639004 NLRP13Q86W25 1043 aa10.56□□□□□ -0.72
FAM49B-230ENST00000639004 FOXD3Q9UJU5 478 aaPredicted RBP10.56□□□□□ -0.72
FAM49B-230ENST00000639004 RBM47A0AV96 593 aaKnown RBP10.55□□□□□ -0.72
FAM49B-230ENST00000639004 TNFRSF21O75509 655 aa10.55□□□□□ -0.72
FAM49B-230ENST00000639004 SASH3O75995 380 aa10.55□□□□□ -0.72
FAM49B-230ENST00000639004 MAPK8P45983 427 aa10.55□□□□□ -0.72
FAM49B-230ENST00000639004 CTBSQ01459 385 aa10.55□□□□□ -0.72
FAM49B-230ENST00000639004 ORC1Q13415 861 aa10.55□□□□□ -0.72
FAM49B-230ENST00000639004 KRT25Q7Z3Z0 450 aa10.55□□□□□ -0.72
FAM49B-230ENST00000639004 TARSP26639 723 aaKnown RBP10.54□□□□□ -0.72
FAM49B-230ENST00000639004 TAGLNQ01995 201 aaKnown RBP10.54□□□□□ -0.72
FAM49B-230ENST00000639004 GPR161Q8N6U8 529 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms