RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 EVLQ9UI08 416 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 KDM2BQ8NHM5 1336 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 MAPK8IP3Q9UPT6 1336 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 GOLGA6L10A6NI86 522 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 CDKL5O76039 1030 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TRIM21P19474 475 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 PDCD2Q16342 344 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TTC31Q49AM3 519 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 C1QTNF12Q5T7M4 302 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 PDCL2Q8N4E4 241 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 GIPC2Q8TF65 315 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 VEZTQ9HBM0 779 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 SBNO2Q9Y2G9 1366 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC144AA2RUR9 1427 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 UACAQ9BZF9 1416 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 A0A1B0GUL7 405 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 ELL2O00472 640 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 KINO60870 393 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 BIRC3Q13489 604 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC152Q4G0S7 254 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 ENOX1Q8TC92 643 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 MIPOL1Q8TD10 442 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 KIF12Q96FN5 646 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 CRBNQ96SW2 442 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 TRMT1Q9NXH9 659 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 JRKLQ9Y4A0 524 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 MRFAP1Q9Y605 127 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 IGF1RP08069 1367 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 PTPN23Q9H3S7 1636 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 TRIM64CA6NLI5 447 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 MYO1BO43795 1136 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 KRT38O76015 456 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 VDRP11473 427 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 CAPN2P17655 700 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 IFT88Q13099 833 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 TTLL5Q6EMB2 1281 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 CACTIN-AS1Q8N1I8 211 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 SPC24Q8NBT2 197 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 BICD1Q96G01 975 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 GPATCH3Q96I76 525 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 SH3GL3Q99963 347 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 INCENPQ9NQS7 918 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 ETAA1Q9NY74 926 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 NRBP1Q9UHY1 535 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 THRAP3Q9Y2W1 955 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 RABGAP1Q9Y3P9 1069 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 MSL3P1P0C860 447 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 RWDD2BP57060 319 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC15Q0P6D6 951 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 GJC2Q5T442 439 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 DZIP3Q86Y13 1208 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 C10orf67Q8IYJ2 551 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC89Q8N998 374 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 TNPO1Q92973 898 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 PRIMPOLQ96LW4 560 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 BCL2L13Q9BXK5 485 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 HECW2Q9P2P5 1572 aa4.53□□□□□ -1.68
R3HDM1-220ENST00000628915 ERCC5P28715 1186 aaPredicted RBP4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 CD151P48509 253 aa4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 DEUP1Q05D60 604 aa4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 TTC19Q6DKK2 380 aaPredicted RBP4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 GIGYF2Q6Y7W6 1299 aaKnown RBP4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 SYNE3Q6ZMZ3 975 aa4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 LMNTD2Q8IXW0 634 aa4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 DYDC1Q8WWB3 177 aa4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 DHX38Q92620 1227 aaKnown RBP4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 LZTS2Q9BRK4 669 aa4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 ARIH1Q9Y4X5 557 aaPredicted RBP4.53□□□□□ -1.69
R3HDM1-220ENST00000628915 ALKQ9UM73 1620 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 NINLQ9Y2I6 1382 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 ADGBQ8N7X0 1667 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 SCAPERQ9BY12 1400 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 VIMP08670 466 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 SOGA3Q5TF21 947 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 MYO1HQ8N1T3 1032 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 RBM46Q8TBY0 533 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 SNRNP27Q8WVK2 155 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 JDP2Q8WYK2 163 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 ZMAT2Q96NC0 199 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 PPCSQ9HAB8 311 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 BRD4O60885 1362 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 ROCK2O75116 1388 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 KIF11P52732 1056 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 WASHC5Q12768 1159 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 HHATQ5VTY9 493 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 C9orf131Q5VYM1 1079 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 SNX32Q86XE0 403 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 NDUFAF2Q8N183 169 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 ATP6V1E2Q96A05 226 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 TAOK3Q9H2K8 898 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 MRGBPQ9NV56 204 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 ZNF232Q9UNY5 417 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 IL16Q14005 1332 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 LMTK3Q96Q04 1460 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 PCNTO95613 3336 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 FOSP01100 380 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 CFAP58Q5T655 872 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 ARMC3Q5W041 872 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms