RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 AOX1Q06278 1338 aa22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 PTPN12Q05209 780 aaKnown RBP22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 DAXXQ9UER7 740 aaPredicted RBP22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 USP21Q9UK80 565 aa22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 MYH14Q7Z406 1995 aaKnown RBP22.62■■□□□ 1.21
PCDHB2-202ENST00000622947 MAP3K15Q6ZN16 1313 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 LMBR1LQ6UX01 489 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 USP42Q9H9J4 1324 aaKnown RBP22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 G3BP1Q13283 466 aaKnown RBP eCLIP22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 ARXQ96QS3 562 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 TBC1D2Q9BYX2 928 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 COPRSQ9NQ92 184 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 MAP4K4O95819 1239 aaPredicted RBP22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 ITPK1Q13572 414 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 KIF6Q6ZMV9 814 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 PTF1AQ7RTS3 328 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 CLASRPQ8N2M8 674 aaKnown RBP22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 EAF2Q96CJ1 260 aaPredicted RBP22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 NUP98P52948 1817 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 LOC102724428A0A0B4J2F2 783 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 SIK1P57059 783 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 RILPL2Q969X0 211 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 AK9Q5TCS8 1911 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 TRIM6-TRIM34B2RNG4 842 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 TRIM28Q13263 835 aaKnown RBP22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 ATP6V1AP38606 617 aa22.58■■□□□ 1.21
PCDHB2-202ENST00000622947 GIGYF2Q6Y7W6 1299 aaKnown RBP22.58■■□□□ 1.21
PCDHB2-202ENST00000622947 USP26Q9BXU7 913 aa22.58■■□□□ 1.21
PCDHB2-202ENST00000622947 PALLDQ8WX93 1383 aa22.58■■□□□ 1.2
PCDHB2-202ENST00000622947 THSD7AQ9UPZ6 1657 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 AACSQ86V21 672 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 TLR7Q9NYK1 1049 aaKnown RBP22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 CHMLP26374 656 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 IL6STP40189 918 aaPredicted RBP22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 SYNE4Q8N205 404 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 TBC1D2BQ9UPU7 963 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 ANKRD36CQ5JPF3 1778 aa22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 CICQ96RK0 1608 aaPredicted RBP22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 RREB1Q92766 1687 aa22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 GPTP24298 496 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 CRKLP46109 303 aaKnown RBP22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 EIF5P55010 431 aaKnown RBP22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 FAM182BQ5T319 152 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 FAM89AQ96GI7 184 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 IL25Q9H293 177 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 TTC41PQ6P2S7 1318 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 IFIT2P09913 472 aaKnown RBP22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 CASC1Q6TDU7 716 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 BECN1Q14457 450 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 DZIP3Q86Y13 1208 aaKnown RBP22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 ZMYND15Q9H091 742 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 ECHDC1Q9NTX5 307 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 CHMP3Q9Y3E7 222 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 EP400Q96L91 3159 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 ERC2O15083 957 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 NLRP10Q86W26 655 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 ESYT1Q9BSJ8 1104 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 TFCP2Q12800 502 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 COL5A3P25940 1745 aaPredicted RBP22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 KCNQ4P56696 695 aa22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 AFF2P51816 1311 aa22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 GLRX3O76003 335 aaKnown RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 MEX3CQ5U5Q3 659 aaKnown RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ATG9AQ7Z3C6 839 aa22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ZBTB38Q8NAP3 1195 aaPredicted RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ZNF594Q96JF6 807 aaPredicted RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 UBN2Q6ZU65 1347 aa22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ERVV-1B6SEH8 477 aa22.5■■□□□ 1.19
PCDHB2-202ENST00000622947 CD2BP2O95400 341 aaKnown RBP22.5■■□□□ 1.19
PCDHB2-202ENST00000622947 SMARCC1Q92922 1105 aaPredicted RBP22.49■■□□□ 1.19
PCDHB2-202ENST00000622947 TNNI3KQ59H18 835 aa22.49■■□□□ 1.19
PCDHB2-202ENST00000622947 FPGT-TNNI3KV9GXZ4 949 aa22.49■■□□□ 1.19
PCDHB2-202ENST00000622947 BTAF1O14981 1849 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 REC8O95072 547 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 LRRC24Q50LG9 513 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 ZNF34Q8IZ26 560 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 LINC00116Q8NCU8 138 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 CCDC85AQ96PX6 553 aaPredicted RBP22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 PLA2G12BQ9BX93 195 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 DBNLQ9UJU6 430 aaKnown RBP22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 HSP90AB3PQ58FF7 597 aa22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 CNTROBQ8N137 903 aa22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 PUS3Q9BZE2 481 aaKnown RBP22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 ZNF831Q5JPB2 1677 aa22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 CSF1RP07333 972 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 CAMTA2O94983 1202 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 SNX21Q969T3 373 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 GPATCH3Q96I76 525 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 MYH3P11055 1940 aa22.45■■□□□ 1.19
PCDHB2-202ENST00000622947 CDHR2Q9BYE9 1310 aa22.45■■□□□ 1.18
PCDHB2-202ENST00000622947 ATRNO75882 1429 aa22.45■■□□□ 1.18
PCDHB2-202ENST00000622947 RRAGDQ9NQL2 400 aaPredicted RBP22.45■■□□□ 1.18
PCDHB2-202ENST00000622947 NHSQ6T4R5 1651 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms