RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TFCP2Q12800 502 aa12.08□□□□□ -0.47
VTA1-205ENST00000620996 TAF7LQ5H9L4 462 aa12.08□□□□□ -0.47
VTA1-205ENST00000620996 FAM89AQ96GI7 184 aa12.08□□□□□ -0.47
VTA1-205ENST00000620996 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.47
VTA1-205ENST00000620996 SPATA31A5Q5VU36 1347 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 SPATA31A7Q8IWB4 1347 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 ZNF594Q96JF6 807 aaPredicted RBP12.08□□□□□ -0.48
VTA1-205ENST00000620996 NEUROD6Q96NK8 337 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
VTA1-205ENST00000620996 AOX1Q06278 1338 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 BCL9O00512 1426 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
VTA1-205ENST00000620996 NOL8Q76FK4 1167 aaKnown RBP12.08□□□□□ -0.48
VTA1-205ENST00000620996 CCDC191Q8NCU4 936 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 KIF2CQ99661 725 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
VTA1-205ENST00000620996 TCIRG1Q13488 830 aa12.07□□□□□ -0.48
VTA1-205ENST00000620996 COL22A1Q8NFW1 1626 aaPredicted RBP12.07□□□□□ -0.48
VTA1-205ENST00000620996 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
VTA1-205ENST00000620996 CYP19A1P11511 503 aaPredicted RBP12.07□□□□□ -0.48
VTA1-205ENST00000620996 HLFQ16534 295 aa12.07□□□□□ -0.48
VTA1-205ENST00000620996 KIAA1211Q6ZU35 1233 aa12.07□□□□□ -0.48
VTA1-205ENST00000620996 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
VTA1-205ENST00000620996 GLI3P10071 1580 aa12.07□□□□□ -0.48
VTA1-205ENST00000620996 PLCH1Q4KWH8 1693 aa12.07□□□□□ -0.48
VTA1-205ENST00000620996 TTC41PQ6P2S7 1318 aa12.07□□□□□ -0.48
VTA1-205ENST00000620996 H7C1W4 665 aa12.06□□□□□ -0.48
VTA1-205ENST00000620996 KCNQ2O43526 872 aa12.06□□□□□ -0.48
VTA1-205ENST00000620996 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
VTA1-205ENST00000620996 PTPN12Q05209 780 aaKnown RBP12.06□□□□□ -0.48
VTA1-205ENST00000620996 PDE4CQ08493 712 aa12.06□□□□□ -0.48
VTA1-205ENST00000620996 RABEP1Q15276 862 aa12.06□□□□□ -0.48
VTA1-205ENST00000620996 ARFGEF2Q9Y6D5 1785 aa12.06□□□□□ -0.48
VTA1-205ENST00000620996 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
VTA1-205ENST00000620996 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
VTA1-205ENST00000620996 DNAJC2Q99543 621 aaKnown RBP12.06□□□□□ -0.48
VTA1-205ENST00000620996 FSD1Q9BTV5 496 aa12.06□□□□□ -0.48
VTA1-205ENST00000620996 KCNQ4P56696 695 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 CCDC57Q2TAC2 916 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 SYNE4Q8N205 404 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 NDUFB9Q9Y6M9 179 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 CASP7P55210 303 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 FOXO4P98177 505 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 COPRSQ9NQ92 184 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 USP21Q9UK80 565 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
VTA1-205ENST00000620996 ST18O60284 1047 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 IL25Q9H293 177 aa12.05□□□□□ -0.48
VTA1-205ENST00000620996 TRMT112Q9UI30 125 aaKnown RBP12.05□□□□□ -0.48
VTA1-205ENST00000620996 UBR2Q8IWV8 1755 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 RFX5P48382 616 aaPredicted RBP12.04□□□□□ -0.48
VTA1-205ENST00000620996 TNNI3KQ59H18 835 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 FPGT-TNNI3KV9GXZ4 949 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 JCADQ9P266 1359 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 KCNJ4P48050 445 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 SIK1P57059 783 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 RABL6Q3YEC7 729 aaPredicted RBP12.04□□□□□ -0.48
VTA1-205ENST00000620996 SNX21Q969T3 373 aa12.04□□□□□ -0.48
VTA1-205ENST00000620996 NEK4P51957 841 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 LRRC24Q50LG9 513 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 EDC3Q96F86 508 aaKnown RBP12.03□□□□□ -0.48
VTA1-205ENST00000620996 DBNDD2Q9BQY9 259 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 ISCA1Q9BUE6 129 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 PAPPAQ13219 1627 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 GIGYF2Q6Y7W6 1299 aaKnown RBP12.03□□□□□ -0.48
VTA1-205ENST00000620996 PALD1Q9ULE6 856 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 ITGB4P16144 1822 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
VTA1-205ENST00000620996 RUFY2Q8WXA3 655 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 EVI5LQ96CN4 794 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
VTA1-205ENST00000620996 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.48
VTA1-205ENST00000620996 GORABQ5T7V8 394 aa12.02□□□□□ -0.48
VTA1-205ENST00000620996 BARGINQ6ZT62 677 aa12.02□□□□□ -0.48
VTA1-205ENST00000620996 PUS3Q9BZE2 481 aaKnown RBP12.02□□□□□ -0.48
VTA1-205ENST00000620996 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.48
VTA1-205ENST00000620996 CHMP5Q9NZZ3 219 aa12.02□□□□□ -0.48
VTA1-205ENST00000620996 DBNLQ9UJU6 430 aaKnown RBP12.02□□□□□ -0.48
VTA1-205ENST00000620996 PALLDQ8WX93 1383 aa12.02□□□□□ -0.49
VTA1-205ENST00000620996 TIMM10P62072 90 aa12.02□□□□□ -0.49
VTA1-205ENST00000620996 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
VTA1-205ENST00000620996 IFIT5Q13325 482 aaKnown RBP12.01□□□□□ -0.49
VTA1-205ENST00000620996 ITPK1Q13572 414 aa12.01□□□□□ -0.49
VTA1-205ENST00000620996 NLRP10Q86W26 655 aa12.01□□□□□ -0.49
VTA1-205ENST00000620996 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
VTA1-205ENST00000620996 ANTXR1Q9H6X2 564 aa12.01□□□□□ -0.49
VTA1-205ENST00000620996 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
VTA1-205ENST00000620996 IRS4O14654 1257 aaPredicted RBP12.01□□□□□ -0.49
VTA1-205ENST00000620996 SGSM2O43147 1006 aa12.01□□□□□ -0.49
VTA1-205ENST00000620996 PCCAP05165 728 aaPredicted RBP12.01□□□□□ -0.49
VTA1-205ENST00000620996 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
VTA1-205ENST00000620996 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
VTA1-205ENST00000620996 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
VTA1-205ENST00000620996 SLIT2O94813 1529 aa12□□□□□ -0.49
VTA1-205ENST00000620996 EYA2O00167 538 aa12□□□□□ -0.49
VTA1-205ENST00000620996 IL15P40933 162 aaPredicted RBP12□□□□□ -0.49
VTA1-205ENST00000620996 VPS72Q15906 364 aa12□□□□□ -0.49
VTA1-205ENST00000620996 DDX46Q7L014 1031 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms