RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 PRDM11Q9NQV5 511 aa18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 BABAM1Q9NWV8 329 aa18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 SMARCA5O60264 1052 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
SEMA3B-214ENST00000619119 ATP10DQ9P241 1426 aa18.84■□□□□ 0.61
SEMA3B-214ENST00000619119 CCDC112Q8NEF3 446 aa18.84■□□□□ 0.61
SEMA3B-214ENST00000619119 SMTNL1A8MU46 457 aa18.83■□□□□ 0.6
SEMA3B-214ENST00000619119 KMT5BQ4FZB7 885 aa18.83■□□□□ 0.6
SEMA3B-214ENST00000619119 RPAP2Q8IXW5 612 aaPredicted RBP18.83■□□□□ 0.6
SEMA3B-214ENST00000619119 ZNF592Q92610 1267 aa18.83■□□□□ 0.6
SEMA3B-214ENST00000619119 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
SEMA3B-214ENST00000619119 ST18O60284 1047 aa18.83■□□□□ 0.6
SEMA3B-214ENST00000619119 KDM4AO75164 1064 aa18.83■□□□□ 0.6
SEMA3B-214ENST00000619119 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-214ENST00000619119 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
SEMA3B-214ENST00000619119 NOL10Q9BSC4 688 aaKnown RBP18.82■□□□□ 0.6
SEMA3B-214ENST00000619119 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 TNNT1P13805 278 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 SYCP1Q15431 976 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 EFCC1Q9HA90 598 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 ZNF397Q8NF99 534 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 MEGF6O75095 1541 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 PI4KAP2A4QPH2 592 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 GNAI2P04899 355 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 PTGS1P23219 599 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 PROSER3Q2NL68 480 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 PI4KAP1Q8N8J0 262 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 STRN4Q9NRL3 753 aa18.81■□□□□ 0.6
SEMA3B-214ENST00000619119 AP5Z1O43299 807 aa18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 TOM1L2Q6ZVM7 507 aa18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 NOL8Q76FK4 1167 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 NCAPD2Q15021 1401 aa18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 GTF2A1P52655 376 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 GEMIN8Q9NWZ8 242 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
SEMA3B-214ENST00000619119 PHKG2P15735 406 aa18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 CYP2C19P33261 490 aa18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 YY1AP1Q9H869 796 aa18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 GIGYF1O75420 1035 aaPredicted RBP18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 PRR29P0C7W0 189 aa18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 PSEN1P49768 467 aa18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 GTF3C6Q969F1 213 aa18.79■□□□□ 0.6
SEMA3B-214ENST00000619119 NPHP1O15259 732 aa18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 RASSF4Q9H2L5 321 aa18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 FAM208AQ9UK61 1670 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 PNMA6EA0A0J9YXQ4 647 aa18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 CYP27B1O15528 508 aa18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 GYS2P54840 703 aa18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 AIMP1Q12904 312 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 NEK11Q8NG66 645 aa18.78■□□□□ 0.6
SEMA3B-214ENST00000619119 C10orf67Q8IYJ2 551 aa18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 GOLGA6L6A8MZA4 724 aa18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 HMMRO75330 724 aa18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 RBM6P78332 1123 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 LRMPQ12912 555 aa18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 FBXO38Q6PIJ6 1188 aa18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 IFNL2Q8IZJ0 200 aa18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-214ENST00000619119 LMO7Q8WWI1 1683 aa18.77■□□□□ 0.59
SEMA3B-214ENST00000619119 GNAI3P08754 354 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 UBTFL1P0CB47 393 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 PIP4K2AP48426 406 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 MMP14P50281 582 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 PLEKHM2Q8IWE5 1019 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 SRCIN1Q9C0H9 1055 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 KCNG1Q9UIX4 513 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 SOS2Q07890 1332 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 USP26Q9BXU7 913 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 SLC52A2Q9HAB3 445 aa18.76■□□□□ 0.59
SEMA3B-214ENST00000619119 DHX16O60231 1041 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 ZNF790Q6PG37 636 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 TOMM22Q9NS69 142 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 DBF4Q9UBU7 674 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 TPM3P06753 285 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 CCDC183Q5T5S1 534 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 KDM6AO15550 1401 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 TRIM66O15016 1216 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 BRD1O95696 1058 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 MYL6BP14649 208 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 GSPT1P15170 499 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 ELF2Q15723 593 aa18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 ZNF215Q9UL58 517 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-214ENST00000619119 HOXB7P09629 217 aa18.74■□□□□ 0.59
SEMA3B-214ENST00000619119 NBPF7P0C2Y1 421 aaPredicted RBP18.74■□□□□ 0.59
SEMA3B-214ENST00000619119 NOP2P46087 812 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-214ENST00000619119 EP400NLQ6ZTU2 488 aa18.74■□□□□ 0.59
SEMA3B-214ENST00000619119 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
SEMA3B-214ENST00000619119 SYT10Q6XYQ8 523 aa18.73■□□□□ 0.59
SEMA3B-214ENST00000619119 EVA1CP58658 441 aa18.73■□□□□ 0.59
SEMA3B-214ENST00000619119 TPD52L1Q16890 204 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-214ENST00000619119 MAP3K2Q9Y2U5 619 aa18.73■□□□□ 0.59
SEMA3B-214ENST00000619119 GIMAP6Q6P9H5 292 aa18.73■□□□□ 0.59
SEMA3B-214ENST00000619119 DDX54Q8TDD1 881 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-214ENST00000619119 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms