RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 SPEF2Q9C093 1822 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ZSCAN23Q3MJ62 389 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 CLASRPQ8N2M8 674 aaKnown RBP13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TM6SF1Q9BZW5 370 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 COPRSQ9NQ92 184 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 GCKRQ14397 625 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ALDH8A1Q9H2A2 487 aaPredicted RBP13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 C9orf78Q9NZ63 289 aaPredicted RBP13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 OFD1O75665 1012 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TSHZ3Q63HK5 1081 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TTC14Q96N46 770 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ZDHHC9Q9Y397 364 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 HSPA2P54652 639 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 CASP7P55210 303 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 BRD1O95696 1058 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 SASH1O94885 1247 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 IL1RAPL2Q9NP60 686 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 PLBD2Q8NHP8 589 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 CARD10Q9BWT7 1032 aa13.05□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ZNF445P59923 1031 aa13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 NEK4P51957 841 aa13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 IL25Q9H293 177 aa13.04□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 COL14A1Q05707 1796 aaKnown RBP13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ANXA1P04083 346 aa13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TTC12Q9H892 705 aaPredicted RBP13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ANO2Q9NQ90 1003 aa13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 GPR108Q9NPR9 543 aa13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 SNX14Q9Y5W7 946 aa13.03□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.32
SENP3-EIF4A1-201ENST00000614237 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 H7C1W4 665 aa13.02□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.338e-10■■□□□ 14.1
SENP3-EIF4A1-201ENST00000614237 NECTIN1Q15223 517 aa13.02□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 COPS6Q7L5N1 327 aa13.02□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 SPC24Q8NBT2 197 aa13.02□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 TMEM87AQ8NBN3 555 aa13.01□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 RPAP1Q9BWH6 1393 aaPredicted RBP13.01□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 MAP4K1Q92918 833 aa13.01□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 USP16Q9Y5T5 823 aa13.01□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ATP5JP18859 108 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 CABP4P57796 275 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 USP25Q9UHP3 1055 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 DISP2A7MBM2 1401 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 SLC39A6Q13433 755 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 TMEM63CQ9P1W3 806 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 FBXO3Q9UK99 471 aa13□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 PTPN12Q05209 780 aaKnown RBP12.99□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 GPT2Q8TD30 523 aa12.99□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ITGB4P16144 1822 aa12.99□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 RREB1Q92766 1687 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms