RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
NDFIP2-205ENST00000612570 CT47A1Q5JQC4 288 aaPredicted RBP16.9■□□□□ 0.3
NDFIP2-205ENST00000612570 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
NDFIP2-205ENST00000612570 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
NDFIP2-205ENST00000612570 IL2RBP14784 551 aa16.9■□□□□ 0.3
NDFIP2-205ENST00000612570 NUP62CLQ9H1M0 184 aa16.9■□□□□ 0.3
NDFIP2-205ENST00000612570 STX6O43752 255 aa16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 ZNF652Q9Y2D9 606 aa16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 E9PCH4 1651 aa16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 ABCA9Q8IUA7 1624 aa16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 JMYQ8N9B5 988 aa16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 DDX17Q92841 729 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 RBM8AQ9Y5S9 174 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 SLC3A2P08195 630 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-205ENST00000612570 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
NDFIP2-205ENST00000612570 GJB2P29033 226 aa16.88■□□□□ 0.29
NDFIP2-205ENST00000612570 SETQ01105 290 aaPredicted RBP16.88■□□□□ 0.29
NDFIP2-205ENST00000612570 KLHL40Q2TBA0 621 aa16.88■□□□□ 0.29
NDFIP2-205ENST00000612570 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
NDFIP2-205ENST00000612570 HMGN5P82970 282 aaKnown RBP16.88■□□□□ 0.29
NDFIP2-205ENST00000612570 EPS15P42566 896 aa16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 UBAC1Q9BSL1 405 aa16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 UQCRHLA0A096LP55 91 aa16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 UQCRHP07919 91 aa16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 USP6P35125 1406 aa16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 SCAND2PQ9GZW5 306 aaPredicted RBP16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 CDKL5O76039 1030 aa16.87■□□□□ 0.29
NDFIP2-205ENST00000612570 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 KCNQ3O43525 872 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 ZNF213O14771 459 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 GUCY1B3Q02153 619 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 CCDC82Q8N4S0 544 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 NAPBQ9H115 298 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 HMG20BQ9P0W2 317 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 ZHX3Q9H4I2 956 aa16.86■□□□□ 0.29
NDFIP2-205ENST00000612570 MAP3K12Q12852 859 aa16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 TFIP11Q9UBB9 837 aaKnown RBP16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 HAND2P61296 217 aa16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 USP44Q9H0E7 712 aa16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 RTL1A6NKG5 1358 aa16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 NLRP1Q9C000 1473 aa16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 IL15P40933 162 aaPredicted RBP16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
NDFIP2-205ENST00000612570 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 NMIQ13287 307 aaPredicted RBP16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 FILIP1LQ4L180 1135 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 SLC5A1P13866 664 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 RBM27Q9P2N5 1060 aaKnown RBP16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
NDFIP2-205ENST00000612570 BRF1Q92994 677 aa16.83■□□□□ 0.29
NDFIP2-205ENST00000612570 SLC52A2Q9HAB3 445 aa16.83■□□□□ 0.29
NDFIP2-205ENST00000612570 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
NDFIP2-205ENST00000612570 AXDND1Q5T1B0 1012 aaPredicted RBP16.83■□□□□ 0.28
NDFIP2-205ENST00000612570 KLHDC4Q8TBB5 520 aa16.83■□□□□ 0.28
NDFIP2-205ENST00000612570 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 ABCA6Q8N139 1617 aa16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 GLI2P10070 1586 aa16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 TFCP2Q12800 502 aa16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 LRRC2Q9BYS8 371 aa16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 CKAP2LQ8IYA6 745 aa16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
NDFIP2-205ENST00000612570 ZPR1O75312 459 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 MAPK8IP2Q13387 824 aaPredicted RBP16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 ATP2B3Q16720 1220 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 DHX37Q8IY37 1157 aaKnown RBP16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 AK7Q96M32 723 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 MCMDC2Q4G0Z9 681 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 ZSCAN30Q86W11 494 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 LMTK2Q8IWU2 1503 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 GOLGA8BA8MQT2 603 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 H0YHG0 523 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 ACBD3Q9H3P7 528 aa16.81■□□□□ 0.28
NDFIP2-205ENST00000612570 AK2P54819 239 aa16.8■□□□□ 0.28
NDFIP2-205ENST00000612570 USP25Q9UHP3 1055 aa16.8■□□□□ 0.28
NDFIP2-205ENST00000612570 KRT18P05783 430 aaKnown RBP16.8■□□□□ 0.28
NDFIP2-205ENST00000612570 ODF2Q5BJF6 829 aa16.8■□□□□ 0.28
NDFIP2-205ENST00000612570 MTERF4Q7Z6M4 381 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms