RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 PHACTR1Q9C0D0 580 aa8.48□□□□□ -1.05
TARDBP-212ENST00000611008 RNF112Q9ULX5 631 aa8.48□□□□□ -1.05
TARDBP-212ENST00000611008 RGS9O75916 674 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-212ENST00000611008 HIRAP54198 1017 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-212ENST00000611008 NFATC2IPQ8NCF5 419 aa8.47□□□□□ -1.05
TARDBP-212ENST00000611008 EFCC1Q9HA90 598 aa8.47□□□□□ -1.05
TARDBP-212ENST00000611008 MCTP1Q6DN14 999 aa8.46□□□□□ -1.06
TARDBP-212ENST00000611008 TRIM50Q86XT4 487 aa8.46□□□□□ -1.06
TARDBP-212ENST00000611008 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.06
TARDBP-212ENST00000611008 DNAJB12Q9NXW2 375 aaKnown RBP8.46□□□□□ -1.06
TARDBP-212ENST00000611008 DEPDC4Q8N2C3 294 aa8.45□□□□□ -1.06
TARDBP-212ENST00000611008 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
TARDBP-212ENST00000611008 WFDC12Q8WWY7 111 aa8.45□□□□□ -1.06
TARDBP-212ENST00000611008 USP17L5A8MUK1 530 aa8.44□□□□□ -1.06
TARDBP-212ENST00000611008 IREB2P48200 963 aaKnown RBP8.44□□□□□ -1.06
TARDBP-212ENST00000611008 PNMA5Q96PV4 448 aa8.44□□□□□ -1.06
TARDBP-212ENST00000611008 HIF1AQ16665 826 aa8.43□□□□□ -1.06
TARDBP-212ENST00000611008 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
TARDBP-212ENST00000611008 POTEAQ6S8J7 498 aa8.43□□□□□ -1.06
TARDBP-212ENST00000611008 BTLAQ7Z6A9 289 aa8.43□□□□□ -1.06
TARDBP-212ENST00000611008 DTWD1Q8N5C7 304 aa8.43□□□□□ -1.06
TARDBP-212ENST00000611008 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
TARDBP-212ENST00000611008 ATP1A2P50993 1020 aa8.42□□□□□ -1.06
TARDBP-212ENST00000611008 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
TARDBP-212ENST00000611008 ILDR2Q71H61 639 aa8.42□□□□□ -1.06
TARDBP-212ENST00000611008 FBXO11Q86XK2 927 aa8.42□□□□□ -1.06
TARDBP-212ENST00000611008 ALG2Q9H553 416 aa8.42□□□□□ -1.06
TARDBP-212ENST00000611008 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
TARDBP-212ENST00000611008 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-212ENST00000611008 PAX4O43316 350 aa8.41□□□□□ -1.06
TARDBP-212ENST00000611008 NOS3P29474 1203 aa8.41□□□□□ -1.06
TARDBP-212ENST00000611008 GSX2Q9BZM3 304 aa8.41□□□□□ -1.06
TARDBP-212ENST00000611008 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.06
TARDBP-212ENST00000611008 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
TARDBP-212ENST00000611008 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
TARDBP-212ENST00000611008 NFKB1P19838 968 aa8.4□□□□□ -1.06
TARDBP-212ENST00000611008 CCINQ13939 588 aa8.4□□□□□ -1.06
TARDBP-212ENST00000611008 PCSK7Q16549 785 aa8.4□□□□□ -1.06
TARDBP-212ENST00000611008 FAM35AQ86V20 835 aa8.4□□□□□ -1.06
TARDBP-212ENST00000611008 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
TARDBP-212ENST00000611008 KIAA1024Q9UPX6 916 aa8.4□□□□□ -1.06
TARDBP-212ENST00000611008 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
TARDBP-212ENST00000611008 PRR23CQ6ZRP0 262 aa8.39□□□□□ -1.07
TARDBP-212ENST00000611008 COL17A1Q9UMD9 1497 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-212ENST00000611008 M0R2N6 131 aa8.38□□□□□ -1.07
TARDBP-212ENST00000611008 CPB1P15086 417 aa8.38□□□□□ -1.07
TARDBP-212ENST00000611008 TXKP42681 527 aa8.38□□□□□ -1.07
TARDBP-212ENST00000611008 WFDC8Q8IUA0 241 aa8.38□□□□□ -1.07
TARDBP-212ENST00000611008 MEGF10Q96KG7 1140 aa8.38□□□□□ -1.07
TARDBP-212ENST00000611008 CLDN10P78369 228 aa8.37□□□□□ -1.07
TARDBP-212ENST00000611008 SLC51AQ86UW1 340 aa8.37□□□□□ -1.07
TARDBP-212ENST00000611008 WWC1Q8IX03 1113 aa8.37□□□□□ -1.07
TARDBP-212ENST00000611008 FRRS1LQ9P0K9 344 aa8.37□□□□□ -1.07
TARDBP-212ENST00000611008 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
TARDBP-212ENST00000611008 NGLY1Q96IV0 654 aa8.36□□□□□ -1.07
TARDBP-212ENST00000611008 RBM19Q9Y4C8 960 aaKnown RBP8.36□□□□□ -1.07
TARDBP-212ENST00000611008 SSTR4P31391 388 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 MCM6Q14566 821 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 GRIK5Q16478 980 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 IER5Q5VY09 327 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 LPIN3Q9BQK8 851 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
TARDBP-212ENST00000611008 USP17L3A6NCW0 530 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 USP17L4A6NCW7 530 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-212ENST00000611008 C21orf2O43822 256 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 COBLO75128 1261 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 EPB42P16452 691 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 FSTP19883 344 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 PERM1Q5SV97 790 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 USP17L2Q6R6M4 530 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 USP17L1Q7RTZ2 530 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 PLEKHM2Q8IWE5 1019 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 STAG2Q8N3U4 1231 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 OGFOD1Q8N543 542 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 COG6Q9Y2V7 657 aa8.34□□□□□ -1.07
TARDBP-212ENST00000611008 MAP3K6O95382 1288 aa8.33□□□□□ -1.08
TARDBP-212ENST00000611008 IRAK1P51617 712 aa8.33□□□□□ -1.08
TARDBP-212ENST00000611008 CHMP7Q8WUX9 453 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-212ENST00000611008 C2orf49Q9BVC5 232 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-212ENST00000611008 AKTIPQ9H8T0 292 aa8.33□□□□□ -1.08
TARDBP-212ENST00000611008 TGFBR3LH3BV60 316 aa8.32□□□□□ -1.08
TARDBP-212ENST00000611008 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.088e-13■□□□□ 8.1
TARDBP-212ENST00000611008 DZIP1LQ8IYY4 767 aaKnown RBP8.32□□□□□ -1.08
TARDBP-212ENST00000611008 GAS2L2Q8NHY3 880 aa8.32□□□□□ -1.08
TARDBP-212ENST00000611008 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
TARDBP-212ENST00000611008 CD97P48960 835 aa8.31□□□□□ -1.08
TARDBP-212ENST00000611008 PLAURQ03405 335 aa8.31□□□□□ -1.08
TARDBP-212ENST00000611008 RTN1Q16799 776 aa8.31□□□□□ -1.08
TARDBP-212ENST00000611008 DHX32Q7L7V1 743 aaKnown RBP8.31□□□□□ -1.08
TARDBP-212ENST00000611008 SIX5Q8N196 739 aa8.31□□□□□ -1.08
TARDBP-212ENST00000611008 TRPM4Q8TD43 1214 aa8.31□□□□□ -1.08
TARDBP-212ENST00000611008 SCG3Q8WXD2 468 aaKnown RBP8.31□□□□□ -1.08
TARDBP-212ENST00000611008 TTC9Q92623 222 aa8.31□□□□□ -1.08
TARDBP-212ENST00000611008 ZNF594Q96JF6 807 aaPredicted RBP8.31□□□□□ -1.08
TARDBP-212ENST00000611008 ZBTB42B2RXF5 422 aa8.3□□□□□ -1.08
TARDBP-212ENST00000611008 DLL1O00548 723 aa8.3□□□□□ -1.08
TARDBP-212ENST00000611008 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms