RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.84□□□□□ -2.111e-41■■■■■ 46.1
TARDBP-212ENST00000611008 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.58□□□□□ -1.522e-21■■□□□ 12.4
TARDBP-212ENST00000611008 U2AF2P26368 475 aaKnown RBP eCLIP2.5□□□□□ -2.018e-15■□□□□ 10.4
TARDBP-212ENST00000611008 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.78□□□□□ -1.81e-13■■■■■ 35.6
TARDBP-212ENST00000611008 TARDBPQ13148 414 aaKnown RBP eCLIP4.43□□□□□ -1.71e-13■■■■■ 26.9
TARDBP-212ENST00000611008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.58□□□□□ -1.683e-13■□□□□ 8.3
TARDBP-212ENST00000611008 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.088e-13■□□□□ 8.1
TARDBP-212ENST00000611008 GRSF1Q12849 480 aaKnown RBP eCLIP3.59□□□□□ -1.831e-11■■□□□ 12.1
TARDBP-212ENST00000611008 SUB1P53999 127 aaKnown RBP eCLIP2.21□□□□□ -2.061e-11■□□□□ 9.4
TARDBP-212ENST00000611008 EIF4G2P78344 907 aaKnown RBP eCLIP8.82□□□□□ -18e-11■■□□□ 12.1
TARDBP-212ENST00000611008 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.391e-10■■■■□ 25
TARDBP-212ENST00000611008 SRSF7Q16629 238 aaKnown RBP eCLIP4.98□□□□□ -1.612e-10■■■□□ 18.4
TARDBP-212ENST00000611008 FUSP35637 526 aaKnown RBP eCLIP1.75□□□□□ -2.133e-10■■□□□ 12.1
TARDBP-212ENST00000611008 ZRANB2O95218 330 aaKnown RBP eCLIP4.48□□□□□ -1.698e-10■□□□□ 10
TARDBP-212ENST00000611008 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.43e-9■■□□□ 11.9
TARDBP-212ENST00000611008 RBM22Q9NW64 420 aaKnown RBP eCLIP2.01□□□□□ -2.095e-8■□□□□ 9.1
TARDBP-212ENST00000611008 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.68□□□□□ -1.667e-8■□□□□ 8.3
TARDBP-212ENST00000611008 CPSF6Q16630 551 aaKnown RBP eCLIP7.9□□□□□ -1.148e-8■■■□□ 17.3
TARDBP-212ENST00000611008 ZC3H11AO75152 810 aaKnown RBP eCLIP4.03□□□□□ -1.761e-7■■□□□ 12
TARDBP-212ENST00000611008 TIA1P31483 386 aaKnown RBP eCLIP2.98□□□□□ -1.934e-7■■■■□ 21
TARDBP-212ENST00000611008 SRSF1Q07955 248 aaKnown RBP eCLIP4.3□□□□□ -1.728e-7■□□□□ 10.8
TARDBP-212ENST00000611008 SF3B4Q15427 424 aaKnown RBP eCLIP3.88□□□□□ -1.798e-7■■□□□ 12.3
TARDBP-212ENST00000611008 TIAL1Q01085 375 aaKnown RBP eCLIP4.03□□□□□ -1.762e-6■■□□□ 13.8
TARDBP-212ENST00000611008 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.45□□□□□ -1.543e-6■□□□□ 10.1
TARDBP-212ENST00000611008 QKIQ96PU8 341 aaKnown RBP eCLIP2.21□□□□□ -2.063e-6■□□□□ 9.1
TARDBP-212ENST00000611008 RBFOX2O43251 390 aaKnown RBP eCLIP2.05□□□□□ -2.089e-6■□□□□ 10.7
Retrieved 26 of 26 RNA–protein pairs in 6.1 ms