RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 PTPN12Q05209 780 aaKnown RBP14.46□□□□□ -0.09
USP6NL-206ENST00000609853 INTS4Q96HW7 963 aaKnown RBP14.46□□□□□ -0.09
USP6NL-206ENST00000609853 LSG1Q9H089 658 aaKnown RBP14.46□□□□□ -0.09
USP6NL-206ENST00000609853 ATP5J2-PTCD1G3V325 749 aa14.46□□□□□ -0.1
USP6NL-206ENST00000609853 TRAK2O60296 914 aa14.46□□□□□ -0.1
USP6NL-206ENST00000609853 PTCD1O75127 700 aaKnown RBP14.46□□□□□ -0.1
USP6NL-206ENST00000609853 STARD3NLO95772 234 aa14.46□□□□□ -0.1
USP6NL-206ENST00000609853 PIP4K2AP48426 406 aaPredicted RBP14.46□□□□□ -0.1
USP6NL-206ENST00000609853 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.1
USP6NL-206ENST00000609853 CDCA7Q9BWT1 371 aaPredicted RBP14.46□□□□□ -0.1
USP6NL-206ENST00000609853 SNRKQ9NRH2 765 aa14.46□□□□□ -0.1
USP6NL-206ENST00000609853 ATG3Q9NT62 314 aa14.46□□□□□ -0.1
USP6NL-206ENST00000609853 A1BGP04217 495 aa14.45□□□□□ -0.1
USP6NL-206ENST00000609853 CUL4AQ13619 759 aa14.45□□□□□ -0.1
USP6NL-206ENST00000609853 CWC27Q6UX04 472 aaKnown RBP14.45□□□□□ -0.1
USP6NL-206ENST00000609853 SIL1Q9H173 461 aa14.45□□□□□ -0.1
USP6NL-206ENST00000609853 PALD1Q9ULE6 856 aa14.45□□□□□ -0.1
USP6NL-206ENST00000609853 RFX7Q2KHR2 1363 aa14.45□□□□□ -0.1
USP6NL-206ENST00000609853 TJP1Q07157 1748 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 WNK3Q9BYP7 1800 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 CYP2E1P05181 493 aaPredicted RBP14.44□□□□□ -0.1
USP6NL-206ENST00000609853 ATP5JP18859 108 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 TTLL7Q6ZT98 887 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 TMX3Q96JJ7 454 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 GPR108Q9NPR9 543 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 FOXO4P98177 505 aa14.44□□□□□ -0.1
USP6NL-206ENST00000609853 CCDC8Q9H0W5 538 aaPredicted RBP14.44□□□□□ -0.1
USP6NL-206ENST00000609853 COL16A1Q07092 1604 aaPredicted RBP14.43□□□□□ -0.1
USP6NL-206ENST00000609853 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 L1TD1Q5T7N2 865 aaKnown RBP14.43□□□□□ -0.1
USP6NL-206ENST00000609853 LMBR1LQ6UX01 489 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 PIGBQ92521 554 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 KCNB2Q92953 911 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 ISCA1Q9BUE6 129 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 IL25Q9H293 177 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 ISY1Q9ULR0 285 aaKnown RBP14.43□□□□□ -0.1
USP6NL-206ENST00000609853 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
USP6NL-206ENST00000609853 EXOC5O00471 708 aa14.42□□□□□ -0.1
USP6NL-206ENST00000609853 TCIRG1Q13488 830 aa14.42□□□□□ -0.1
USP6NL-206ENST00000609853 KIF6Q6ZMV9 814 aa14.42□□□□□ -0.1
USP6NL-206ENST00000609853 TM6SF1Q9BZW5 370 aa14.42□□□□□ -0.1
USP6NL-206ENST00000609853 BCL9O00512 1426 aa14.42□□□□□ -0.1
USP6NL-206ENST00000609853 CIAO1O76071 339 aa14.41□□□□□ -0.1
USP6NL-206ENST00000609853 SSFA2P28290 1259 aa14.41□□□□□ -0.1
USP6NL-206ENST00000609853 IL15P40933 162 aaPredicted RBP14.41□□□□□ -0.1
USP6NL-206ENST00000609853 KLHDC4Q8TBB5 520 aa14.41□□□□□ -0.1
USP6NL-206ENST00000609853 THRAP3Q9Y2W1 955 aaKnown RBP14.41□□□□□ -0.1
USP6NL-206ENST00000609853 SNX14Q9Y5W7 946 aa14.41□□□□□ -0.1
USP6NL-206ENST00000609853 TFCP2Q12800 502 aa14.41□□□□□ -0.1
USP6NL-206ENST00000609853 HSP90AB3PQ58FF7 597 aa14.41□□□□□ -0.1
USP6NL-206ENST00000609853 ZBTB3Q9H5J0 574 aa14.41□□□□□ -0.1
USP6NL-206ENST00000609853 CCDC171Q6TFL3 1326 aa14.4□□□□□ -0.1
USP6NL-206ENST00000609853 BAG4O95429 457 aaKnown RBP14.4□□□□□ -0.1
USP6NL-206ENST00000609853 ZKSCAN1P17029 563 aaPredicted RBP14.4□□□□□ -0.1
USP6NL-206ENST00000609853 FSD1Q9BTV5 496 aa14.4□□□□□ -0.1
USP6NL-206ENST00000609853 PLA2G12BQ9BX93 195 aa14.4□□□□□ -0.1
USP6NL-206ENST00000609853 BOLA2Q9H3K6 86 aa14.4□□□□□ -0.1
USP6NL-206ENST00000609853 TLR7Q9NYK1 1049 aaKnown RBP14.4□□□□□ -0.1
USP6NL-206ENST00000609853 DBNLQ9UJU6 430 aaKnown RBP14.4□□□□□ -0.1
USP6NL-206ENST00000609853 ASAP1Q9ULH1 1129 aa14.4□□□□□ -0.1
USP6NL-206ENST00000609853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.4□□□□□ -0.1
USP6NL-206ENST00000609853 LTBP4Q8N2S1 1624 aa14.39□□□□□ -0.11
USP6NL-206ENST00000609853 DNAJC10Q8IXB1 793 aa14.39□□□□□ -0.11
USP6NL-206ENST00000609853 MAP4K1Q92918 833 aa14.39□□□□□ -0.11
USP6NL-206ENST00000609853 PCCAP05165 728 aaPredicted RBP14.38□□□□□ -0.11
USP6NL-206ENST00000609853 NECTIN1Q15223 517 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 ZGPATQ8N5A5 531 aaKnown RBP14.38□□□□□ -0.11
USP6NL-206ENST00000609853 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
USP6NL-206ENST00000609853 TTC14Q96N46 770 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 HAUS7Q99871 368 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 MAP3K15Q6ZN16 1313 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 EYA2O00167 538 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 NMIQ13287 307 aaPredicted RBP14.38□□□□□ -0.11
USP6NL-206ENST00000609853 UPF3BQ9BZI7 483 aaKnown RBP14.38□□□□□ -0.11
USP6NL-206ENST00000609853 CHMP3Q9Y3E7 222 aa14.38□□□□□ -0.11
USP6NL-206ENST00000609853 PHLPP1O60346 1717 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 JCADQ9P266 1359 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 MED23Q9ULK4 1368 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 SPEF2Q9C093 1822 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 PSMA5P28066 241 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
USP6NL-206ENST00000609853 VPS53Q5VIR6 699 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 GIGYF2Q6Y7W6 1299 aaKnown RBP14.37□□□□□ -0.11
USP6NL-206ENST00000609853 ATG9AQ7Z3C6 839 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 ZBTB38Q8NAP3 1195 aaPredicted RBP14.37□□□□□ -0.11
USP6NL-206ENST00000609853 HMG20BQ9P0W2 317 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 LIMCH1Q9UPQ0 1083 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 ANKRD36CQ5JPF3 1778 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 KAT6BQ8WYB5 2073 aa14.37□□□□□ -0.11
USP6NL-206ENST00000609853 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
USP6NL-206ENST00000609853 GOLGA6L3A6NEY3 463 aa14.36□□□□□ -0.11
USP6NL-206ENST00000609853 CYP19A1P11511 503 aaPredicted RBP14.36□□□□□ -0.11
USP6NL-206ENST00000609853 PTH1RQ03431 593 aa14.36□□□□□ -0.11
USP6NL-206ENST00000609853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.36□□□□□ -0.11
USP6NL-206ENST00000609853 ZSCAN31Q96LW9 406 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms