RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TNMDQ9H2S6 317 aa26.53■■□□□ 1.84
SHANK2-220ENST00000608988 CLSTN2Q9H4D0 955 aa26.53■■□□□ 1.84
SHANK2-220ENST00000608988 SMTNL1A8MU46 457 aa26.53■■□□□ 1.84
SHANK2-220ENST00000608988 CDC25BP30305 580 aa26.53■■□□□ 1.84
SHANK2-220ENST00000608988 SLIT1O75093 1534 aa26.52■■□□□ 1.84
SHANK2-220ENST00000608988 NUTM2FA1L443 756 aa26.52■■□□□ 1.84
SHANK2-220ENST00000608988 KIF20AO95235 890 aa26.52■■□□□ 1.84
SHANK2-220ENST00000608988 PLA2G4DQ86XP0 818 aa26.52■■□□□ 1.84
SHANK2-220ENST00000608988 SPC24Q8NBT2 197 aa26.52■■□□□ 1.84
SHANK2-220ENST00000608988 ARID3AQ99856 593 aa26.52■■□□□ 1.84
SHANK2-220ENST00000608988 TPCN1Q9ULQ1 816 aa26.52■■□□□ 1.84
SHANK2-220ENST00000608988 ADCY9O60503 1353 aa26.51■■□□□ 1.84
SHANK2-220ENST00000608988 PI4KAP2A4QPH2 592 aa26.51■■□□□ 1.83
SHANK2-220ENST00000608988 PI4KAP1Q8N8J0 262 aa26.51■■□□□ 1.83
SHANK2-220ENST00000608988 HMG20BQ9P0W2 317 aa26.51■■□□□ 1.83
SHANK2-220ENST00000608988 PAXBP1Q9Y5B6 917 aa26.51■■□□□ 1.83
SHANK2-220ENST00000608988 GOLGA6L4A6NEF3 574 aa26.51■■□□□ 1.83
SHANK2-220ENST00000608988 TSGA10IPQ3SY00 556 aa26.51■■□□□ 1.83
SHANK2-220ENST00000608988 JCADQ9P266 1359 aa26.5■■□□□ 1.83
SHANK2-220ENST00000608988 PTGS1P23219 599 aa26.5■■□□□ 1.83
SHANK2-220ENST00000608988 ZNF75DP51815 510 aa26.5■■□□□ 1.83
SHANK2-220ENST00000608988 NLRP6P59044 892 aa26.5■■□□□ 1.83
SHANK2-220ENST00000608988 JARID2Q92833 1246 aaPredicted RBP26.5■■□□□ 1.83
SHANK2-220ENST00000608988 CBX8Q9HC52 389 aa26.5■■□□□ 1.83
SHANK2-220ENST00000608988 CHPF2Q9P2E5 772 aa26.5■■□□□ 1.83
SHANK2-220ENST00000608988 SLC27A2O14975 620 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 LIG1P18858 919 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 KCNJ4P48050 445 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 BLOC1S2Q6QNY1 142 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 LMO7Q8WWI1 1683 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 ZBTB7CA1YPR0 619 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 CDC37L1Q7L3B6 337 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 SPATA32Q96LK8 384 aa26.49■■□□□ 1.83
SHANK2-220ENST00000608988 ATP2B3Q16720 1220 aa26.48■■□□□ 1.83
SHANK2-220ENST00000608988 PRDM10Q9NQV6 1147 aa26.48■■□□□ 1.83
SHANK2-220ENST00000608988 OVOS2A0A0G2JMS6 1433 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 NEMFO60524 1076 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 RPS6KB1P23443 525 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 CBX1P83916 185 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 TPRNQ4KMQ1 711 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 ANO6Q4KMQ2 910 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 NECAB1Q8N987 351 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 DACT1Q9NYF0 836 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 CCDC186Q7Z3E2 898 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 LEO1Q8WVC0 666 aaPredicted RBP26.47■■□□□ 1.83
SHANK2-220ENST00000608988 TBX22Q9Y458 520 aa26.47■■□□□ 1.83
SHANK2-220ENST00000608988 RGPD8O14715 1765 aaPredicted RBP26.46■■□□□ 1.83
SHANK2-220ENST00000608988 EIF2S2P20042 333 aaKnown RBP26.46■■□□□ 1.83
SHANK2-220ENST00000608988 LUZP1Q86V48 1076 aa26.46■■□□□ 1.83
SHANK2-220ENST00000608988 DBF4Q9UBU7 674 aaPredicted RBP26.46■■□□□ 1.83
SHANK2-220ENST00000608988 KRT32Q14532 448 aa26.45■■□□□ 1.83
SHANK2-220ENST00000608988 MED23Q9ULK4 1368 aa26.45■■□□□ 1.82
SHANK2-220ENST00000608988 NPHP4O75161 1426 aaPredicted RBP26.45■■□□□ 1.82
SHANK2-220ENST00000608988 NCAPD2Q15021 1401 aa26.45■■□□□ 1.82
SHANK2-220ENST00000608988 LTKP29376 864 aa26.45■■□□□ 1.82
SHANK2-220ENST00000608988 NMIQ13287 307 aaPredicted RBP26.45■■□□□ 1.82
SHANK2-220ENST00000608988 ZSCAN25Q6NSZ9 544 aa26.45■■□□□ 1.82
SHANK2-220ENST00000608988 AACSQ86V21 672 aa26.45■■□□□ 1.82
SHANK2-220ENST00000608988 OGFRQ9NZT2 677 aa26.45■■□□□ 1.82
SHANK2-220ENST00000608988 AMOTL2Q9Y2J4 779 aa26.45■■□□□ 1.82
SHANK2-220ENST00000608988 UTYO14607 1347 aa26.44■■□□□ 1.82
SHANK2-220ENST00000608988 SARM1Q6SZW1 724 aa26.44■■□□□ 1.82
SHANK2-220ENST00000608988 DRC7Q8IY82 874 aa26.44■■□□□ 1.82
SHANK2-220ENST00000608988 TRIM5Q9C035 493 aa26.44■■□□□ 1.82
SHANK2-220ENST00000608988 C9orf78Q9NZ63 289 aaPredicted RBP26.44■■□□□ 1.82
SHANK2-220ENST00000608988 EID1Q9Y6B2 187 aa26.44■■□□□ 1.82
SHANK2-220ENST00000608988 CGNQ9P2M7 1197 aaKnown RBP26.43■■□□□ 1.82
SHANK2-220ENST00000608988 ZSCAN16Q9H4T2 348 aaPredicted RBP26.42■■□□□ 1.82
SHANK2-220ENST00000608988 MRC1P22897 1456 aa26.42■■□□□ 1.82
SHANK2-220ENST00000608988 CTAGE5O15320 804 aa26.42■■□□□ 1.82
SHANK2-220ENST00000608988 CAMK4Q16566 473 aa26.42■■□□□ 1.82
SHANK2-220ENST00000608988 KSR2Q6VAB6 950 aa26.42■■□□□ 1.82
SHANK2-220ENST00000608988 ARHGAP23Q9P227 1491 aa26.42■■□□□ 1.82
SHANK2-220ENST00000608988 RFX7Q2KHR2 1363 aa26.41■■□□□ 1.82
SHANK2-220ENST00000608988 NCBP1Q09161 790 aaKnown RBP26.41■■□□□ 1.82
SHANK2-220ENST00000608988 ZNF165P49910 485 aa26.4■■□□□ 1.82
SHANK2-220ENST00000608988 CFAP45Q9UL16 551 aa26.4■■□□□ 1.82
SHANK2-220ENST00000608988 TNNT1P13805 278 aa26.4■■□□□ 1.82
SHANK2-220ENST00000608988 G3BP1Q13283 466 aaKnown RBP eCLIP26.4■■□□□ 1.82
SHANK2-220ENST00000608988 TOB2Q14106 344 aaPredicted RBP26.4■■□□□ 1.82
SHANK2-220ENST00000608988 FERMT3Q86UX7 667 aa26.4■■□□□ 1.82
SHANK2-220ENST00000608988 FAM177BA6PVY3 158 aa26.39■■□□□ 1.82
SHANK2-220ENST00000608988 AKAP4Q5JQC9 854 aa26.39■■□□□ 1.82
SHANK2-220ENST00000608988 USPL1Q5W0Q7 1092 aa26.39■■□□□ 1.82
SHANK2-220ENST00000608988 LARP1Q6PKG0 1096 aaKnown RBP26.39■■□□□ 1.82
SHANK2-220ENST00000608988 CKAP2LQ8IYA6 745 aa26.39■■□□□ 1.82
SHANK2-220ENST00000608988 MRFAP1L1Q96HT8 127 aa26.39■■□□□ 1.82
SHANK2-220ENST00000608988 FAM227BQ96M60 508 aa26.39■■□□□ 1.82
SHANK2-220ENST00000608988 CCDC112Q8NEF3 446 aa26.38■■□□□ 1.81
SHANK2-220ENST00000608988 IP6K1Q92551 441 aa26.38■■□□□ 1.81
SHANK2-220ENST00000608988 CLIP2Q9UDT6 1046 aa26.38■■□□□ 1.81
SHANK2-220ENST00000608988 LTN1O94822 1766 aa26.38■■□□□ 1.81
SHANK2-220ENST00000608988 TEFQ10587 303 aa26.38■■□□□ 1.81
SHANK2-220ENST00000608988 RESTQ13127 1097 aa26.38■■□□□ 1.81
SHANK2-220ENST00000608988 MAP3K2Q9Y2U5 619 aa26.38■■□□□ 1.81
SHANK2-220ENST00000608988 PHRF1Q9P1Y6 1649 aaKnown RBP26.37■■□□□ 1.81
SHANK2-220ENST00000608988 LINS1Q8NG48 757 aa26.37■■□□□ 1.81
SHANK2-220ENST00000608988 BICD2Q8TD16 824 aa26.37■■□□□ 1.81
SHANK2-220ENST00000608988 BTBD11A6QL63 1104 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 RBM6P78332 1123 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 502 ms