RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 CCT4P50991 539 aaKnown RBP27.37■■□□□ 1.97
NECAB3-221ENST00000607055 COL24A1Q17RW2 1714 aa27.37■■□□□ 1.97
NECAB3-221ENST00000607055 PPP1R42Q7Z4L9 355 aa27.37■■□□□ 1.97
NECAB3-221ENST00000607055 UTP14AQ9BVJ6 771 aaKnown RBP27.37■■□□□ 1.97
NECAB3-221ENST00000607055 NPHP1O15259 732 aa27.36■■□□□ 1.97
NECAB3-221ENST00000607055 MS4A1P11836 297 aa27.36■■□□□ 1.97
NECAB3-221ENST00000607055 RLBP1P12271 317 aa27.36■■□□□ 1.97
NECAB3-221ENST00000607055 PTGER2P43116 358 aa27.36■■□□□ 1.97
NECAB3-221ENST00000607055 PANK1Q8TE04 598 aa27.36■■□□□ 1.97
NECAB3-221ENST00000607055 SGIP1Q9BQI5 828 aa27.36■■□□□ 1.97
NECAB3-221ENST00000607055 TRMT112Q9UI30 125 aaKnown RBP27.36■■□□□ 1.97
NECAB3-221ENST00000607055 AFDNP55196 1824 aaKnown RBP27.36■■□□□ 1.97
NECAB3-221ENST00000607055 NTSR2O95665 410 aa27.35■■□□□ 1.97
NECAB3-221ENST00000607055 GCKRQ14397 625 aa27.35■■□□□ 1.97
NECAB3-221ENST00000607055 TMEM57Q8N5G2 664 aa27.35■■□□□ 1.97
NECAB3-221ENST00000607055 NYXQ9GZU5 481 aa27.35■■□□□ 1.97
NECAB3-221ENST00000607055 GTF2E1P29083 439 aaPredicted RBP27.34■■□□□ 1.97
NECAB3-221ENST00000607055 INTS3Q68E01 1043 aaKnown RBP27.34■■□□□ 1.97
NECAB3-221ENST00000607055 TPTE2Q6XPS3 522 aa27.34■■□□□ 1.97
NECAB3-221ENST00000607055 CNBD1Q8NA66 436 aa27.34■■□□□ 1.97
NECAB3-221ENST00000607055 IBTKQ9P2D0 1353 aaPredicted RBP27.34■■□□□ 1.97
NECAB3-221ENST00000607055 RTL5Q5HYW3 569 aaPredicted RBP27.33■■□□□ 1.97
NECAB3-221ENST00000607055 C20orf194Q5TEA3 1177 aa27.33■■□□□ 1.97
NECAB3-221ENST00000607055 NUTM1Q86Y26 1132 aa27.33■■□□□ 1.97
NECAB3-221ENST00000607055 CCDC24Q8N4L8 307 aa27.33■■□□□ 1.97
NECAB3-221ENST00000607055 JARID2Q92833 1246 aaPredicted RBP27.33■■□□□ 1.97
NECAB3-221ENST00000607055 PRR5LQ6MZQ0 368 aa27.32■■□□□ 1.96
NECAB3-221ENST00000607055 RNF123Q5XPI4 1314 aa27.32■■□□□ 1.96
NECAB3-221ENST00000607055 ERFEQ4G0M1 354 aa27.31■■□□□ 1.96
NECAB3-221ENST00000607055 ITPRIPQ8IWB1 547 aa27.31■■□□□ 1.96
NECAB3-221ENST00000607055 ZBTB38Q8NAP3 1195 aaPredicted RBP27.31■■□□□ 1.96
NECAB3-221ENST00000607055 FAM89AQ96GI7 184 aa27.31■■□□□ 1.96
NECAB3-221ENST00000607055 N4BP2Q86UW6 1770 aaPredicted RBP27.3■■□□□ 1.96
NECAB3-221ENST00000607055 PCCAP05165 728 aaPredicted RBP27.3■■□□□ 1.96
NECAB3-221ENST00000607055 ST5P78524 1137 aa27.3■■□□□ 1.96
NECAB3-221ENST00000607055 PDE3AQ14432 1141 aa27.3■■□□□ 1.96
NECAB3-221ENST00000607055 SYNE4Q8N205 404 aa27.3■■□□□ 1.96
NECAB3-221ENST00000607055 C9orf78Q9NZ63 289 aaPredicted RBP27.3■■□□□ 1.96
NECAB3-221ENST00000607055 SH3TC1Q8TE82 1336 aa27.3■■□□□ 1.96
NECAB3-221ENST00000607055 GRM8O00222 908 aa27.29■■□□□ 1.96
NECAB3-221ENST00000607055 UBE3BQ7Z3V4 1068 aa27.29■■□□□ 1.96
NECAB3-221ENST00000607055 NRXN2Q9P2S2 1712 aa27.29■■□□□ 1.96
NECAB3-221ENST00000607055 ABCC12Q96J65 1359 aa27.28■■□□□ 1.96
NECAB3-221ENST00000607055 H7C1W4 665 aa27.28■■□□□ 1.96
NECAB3-221ENST00000607055 COG6Q9Y2V7 657 aa27.28■■□□□ 1.96
NECAB3-221ENST00000607055 USP44Q9H0E7 712 aa27.26■■□□□ 1.95
NECAB3-221ENST00000607055 IRS4O14654 1257 aaPredicted RBP27.25■■□□□ 1.95
NECAB3-221ENST00000607055 HCLS1P14317 486 aaPredicted RBP27.25■■□□□ 1.95
NECAB3-221ENST00000607055 MVPQ14764 893 aaKnown RBP27.25■■□□□ 1.95
NECAB3-221ENST00000607055 NBPF7P0C2Y1 421 aaPredicted RBP27.24■■□□□ 1.95
NECAB3-221ENST00000607055 KLHL34Q8N239 644 aa27.24■■□□□ 1.95
NECAB3-221ENST00000607055 MEIS3Q99687 375 aa27.24■■□□□ 1.95
NECAB3-221ENST00000607055 PPP1R1BQ9UD71 204 aaPredicted RBP27.24■■□□□ 1.95
NECAB3-221ENST00000607055 C10orf71Q711Q0 1435 aa27.24■■□□□ 1.95
NECAB3-221ENST00000607055 CDHR2Q9BYE9 1310 aa27.23■■□□□ 1.95
NECAB3-221ENST00000607055 CASP7P55210 303 aa27.23■■□□□ 1.95
NECAB3-221ENST00000607055 UTYO14607 1347 aa27.22■■□□□ 1.95
NECAB3-221ENST00000607055 SLC10A5Q5PT55 438 aa27.22■■□□□ 1.95
NECAB3-221ENST00000607055 BRIP1Q9BX63 1249 aa27.22■■□□□ 1.95
NECAB3-221ENST00000607055 UBTFL1P0CB47 393 aaPredicted RBP27.21■■□□□ 1.95
NECAB3-221ENST00000607055 SUCLG2Q96I99 432 aa27.2■■□□□ 1.94
NECAB3-221ENST00000607055 DDX19BQ9UMR2 479 aa27.2■■□□□ 1.94
NECAB3-221ENST00000607055 RIC1Q4ADV7 1423 aa27.19■■□□□ 1.94
NECAB3-221ENST00000607055 GNAI3P08754 354 aa27.19■■□□□ 1.94
NECAB3-221ENST00000607055 HSP90B1P14625 803 aaKnown RBP27.19■■□□□ 1.94
NECAB3-221ENST00000607055 C3orf67Q6ZVT6 689 aa27.19■■□□□ 1.94
NECAB3-221ENST00000607055 TNRC6CQ9HCJ0 1690 aaKnown RBP27.18■■□□□ 1.94
NECAB3-221ENST00000607055 ZBTB7BO15156 539 aaPredicted RBP27.18■■□□□ 1.94
NECAB3-221ENST00000607055 PDE8AO60658 829 aa27.18■■□□□ 1.94
NECAB3-221ENST00000607055 PDE6BP35913 854 aa27.18■■□□□ 1.94
NECAB3-221ENST00000607055 NLRP3Q96P20 1036 aa27.18■■□□□ 1.94
NECAB3-221ENST00000607055 CRBNQ96SW2 442 aa27.18■■□□□ 1.94
NECAB3-221ENST00000607055 DDX60Q8IY21 1712 aaKnown RBP27.18■■□□□ 1.94
NECAB3-221ENST00000607055 ANKRD31Q8N7Z5 1873 aa27.17■■□□□ 1.94
NECAB3-221ENST00000607055 LRP5O75197 1615 aa27.17■■□□□ 1.94
NECAB3-221ENST00000607055 IRX6P78412 446 aaPredicted RBP27.17■■□□□ 1.94
NECAB3-221ENST00000607055 CD2APQ9Y5K6 639 aa27.17■■□□□ 1.94
NECAB3-221ENST00000607055 PLA2G12BQ9BX93 195 aa27.16■■□□□ 1.94
NECAB3-221ENST00000607055 LAMB2P55268 1798 aa27.16■■□□□ 1.94
NECAB3-221ENST00000607055 CTSWP56202 376 aa27.15■■□□□ 1.94
NECAB3-221ENST00000607055 EPHA10Q5JZY3 1008 aa27.15■■□□□ 1.94
NECAB3-221ENST00000607055 LRRFIP2Q9Y608 721 aaKnown RBP27.15■■□□□ 1.94
NECAB3-221ENST00000607055 FOXO4P98177 505 aa27.14■■□□□ 1.94
NECAB3-221ENST00000607055 C2CD5Q86YS7 1000 aa27.14■■□□□ 1.94
NECAB3-221ENST00000607055 KAZALD1Q96I82 304 aa27.14■■□□□ 1.94
NECAB3-221ENST00000607055 FHDC1Q9C0D6 1143 aaPredicted RBP27.14■■□□□ 1.94
NECAB3-221ENST00000607055 HDAC5Q9UQL6 1122 aa27.14■■□□□ 1.94
NECAB3-221ENST00000607055 KIF13BQ9NQT8 1826 aa27.13■■□□□ 1.93
NECAB3-221ENST00000607055 KLRG2A4D1S0 409 aaPredicted RBP27.13■■□□□ 1.93
NECAB3-221ENST00000607055 GNAI2P04899 355 aa27.13■■□□□ 1.93
NECAB3-221ENST00000607055 CHRNA5P30532 468 aa27.13■■□□□ 1.93
NECAB3-221ENST00000607055 CCDC85AQ96PX6 553 aaPredicted RBP27.13■■□□□ 1.93
NECAB3-221ENST00000607055 CHMP4BQ9H444 224 aaKnown RBP27.13■■□□□ 1.93
NECAB3-221ENST00000607055 BICC1Q9H694 974 aaKnown RBP27.13■■□□□ 1.93
NECAB3-221ENST00000607055 H0YIN7 160 aa27.12■■□□□ 1.93
NECAB3-221ENST00000607055 C1orf115Q9H7X2 142 aa27.12■■□□□ 1.93
NECAB3-221ENST00000607055 TGFB2P61812 414 aa27.11■■□□□ 1.93
NECAB3-221ENST00000607055 SF3B3Q15393 1217 aaKnown RBP27.11■■□□□ 1.93
NECAB3-221ENST00000607055 CRY2Q49AN0 593 aa27.11■■□□□ 1.93
NECAB3-221ENST00000607055 TTLL11Q8NHH1 800 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms