RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TMEM214Q6NUQ4 689 aaKnown RBP7.96□□□□□ -1.14
LINC00397-202ENST00000606785 TREML1Q86YW5 311 aa7.96□□□□□ -1.14
LINC00397-202ENST00000606785 METTL5Q9NRN9 209 aaKnown RBP7.96□□□□□ -1.14
LINC00397-202ENST00000606785 GDF11O95390 407 aa7.95□□□□□ -1.14
LINC00397-202ENST00000606785 RELBQ01201 579 aa7.95□□□□□ -1.14
LINC00397-202ENST00000606785 RASSF7Q02833 373 aa7.95□□□□□ -1.14
LINC00397-202ENST00000606785 SF3A1Q15459 793 aaKnown RBP7.95□□□□□ -1.14
LINC00397-202ENST00000606785 C9orf131Q5VYM1 1079 aa7.95□□□□□ -1.14
LINC00397-202ENST00000606785 FBF1Q8TES7 1133 aa7.95□□□□□ -1.14
LINC00397-202ENST00000606785 ZFAND3Q9H8U3 227 aa7.95□□□□□ -1.14
LINC00397-202ENST00000606785 RPLP1P05386 114 aaKnown RBP7.94□□□□□ -1.14
LINC00397-202ENST00000606785 GNA15P30679 374 aa7.94□□□□□ -1.14
LINC00397-202ENST00000606785 TXLNAP40222 546 aa7.94□□□□□ -1.14
LINC00397-202ENST00000606785 WDR4P57081 412 aaKnown RBP7.94□□□□□ -1.14
LINC00397-202ENST00000606785 RAD51AP2Q09MP3 1159 aa7.94□□□□□ -1.14
LINC00397-202ENST00000606785 METTL16Q86W50 562 aaKnown RBP7.94□□□□□ -1.14
LINC00397-202ENST00000606785 GPR152Q8TDT2 470 aa7.94□□□□□ -1.14
LINC00397-202ENST00000606785 NUDT16Q96DE0 195 aaKnown RBP7.94□□□□□ -1.14
LINC00397-202ENST00000606785 CSRNP1Q96S65 589 aa7.94□□□□□ -1.14
LINC00397-202ENST00000606785 ZNF395Q9H8N7 513 aaPredicted RBP7.94□□□□□ -1.14
LINC00397-202ENST00000606785 FAM13BQ9NYF5 915 aa7.94□□□□□ -1.14
LINC00397-202ENST00000606785 NEFLP07196 543 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 TIMP2P16035 220 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 GPC1P35052 558 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 FANCCQ00597 558 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 HIF1AQ16665 826 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 GNASQ5JWF2 1037 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 NT5DC4Q86YG4 428 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 PIK3R5Q8WYR1 880 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 RNF34Q969K3 372 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 CFHR5Q9BXR6 569 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
LINC00397-202ENST00000606785 ORC1Q13415 861 aa7.92□□□□□ -1.14
LINC00397-202ENST00000606785 TTC16Q8NEE8 873 aa7.92□□□□□ -1.14
LINC00397-202ENST00000606785 FRMD6Q96NE9 622 aa7.92□□□□□ -1.14
LINC00397-202ENST00000606785 GRIP2Q9C0E4 1043 aa7.92□□□□□ -1.14
LINC00397-202ENST00000606785 DNAJC25Q9H1X3 360 aa7.92□□□□□ -1.14
LINC00397-202ENST00000606785 GGNBP2Q9H3C7 697 aa7.92□□□□□ -1.14
LINC00397-202ENST00000606785 SOBPA7XYQ1 873 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 EIF1AYO14602 144 aaKnown RBP7.91□□□□□ -1.14
LINC00397-202ENST00000606785 MICAL2O94851 1124 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 ZNF76P36508 570 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 PLA2G4AP47712 749 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 NBPF1Q3BBV0 1214 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 C8orf34Q49A92 452 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 SLC27A3Q5K4L6 730 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 RHPN1Q8TCX5 695 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 UBXN4Q92575 508 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 ZDHHC3Q9NYG2 299 aa7.91□□□□□ -1.14
LINC00397-202ENST00000606785 TGFBR3LH3BV60 316 aa7.9□□□□□ -1.14
LINC00397-202ENST00000606785 RNF144AP50876 292 aaPredicted RBP7.9□□□□□ -1.14
LINC00397-202ENST00000606785 C4orf17Q53FE4 359 aa7.9□□□□□ -1.14
LINC00397-202ENST00000606785 IER5Q5VY09 327 aa7.9□□□□□ -1.14
LINC00397-202ENST00000606785 MEIOBQ8N635 442 aa7.9□□□□□ -1.14
LINC00397-202ENST00000606785 C7orf43Q8WVR3 580 aa7.9□□□□□ -1.14
LINC00397-202ENST00000606785 TGIF2Q9GZN2 237 aa7.9□□□□□ -1.14
LINC00397-202ENST00000606785 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
LINC00397-202ENST00000606785 AK5Q9Y6K8 562 aa7.9□□□□□ -1.14
LINC00397-202ENST00000606785 PPFIA3O75145 1194 aa7.89□□□□□ -1.15
LINC00397-202ENST00000606785 CRELD1Q96HD1 420 aa7.89□□□□□ -1.15
LINC00397-202ENST00000606785 SPG7Q9UQ90 795 aa7.89□□□□□ -1.15
LINC00397-202ENST00000606785 A6NHS1 94 aa7.88□□□□□ -1.15
LINC00397-202ENST00000606785 OPLAHO14841 1288 aa7.88□□□□□ -1.15
LINC00397-202ENST00000606785 MAN1A2O60476 641 aa7.88□□□□□ -1.15
LINC00397-202ENST00000606785 CPNE3O75131 537 aaKnown RBP7.88□□□□□ -1.15
LINC00397-202ENST00000606785 AIDAQ96BJ3 306 aa7.88□□□□□ -1.15
LINC00397-202ENST00000606785 SUSD3Q96L08 255 aa7.88□□□□□ -1.15
LINC00397-202ENST00000606785 PPP1R1BQ9UD71 204 aaPredicted RBP7.88□□□□□ -1.15
LINC00397-202ENST00000606785 SPATA31C2B4DYI2 1134 aa7.87□□□□□ -1.15
LINC00397-202ENST00000606785 IGHA1P01876 353 aa7.87□□□□□ -1.15
LINC00397-202ENST00000606785 CTSHP09668 335 aa7.87□□□□□ -1.15
LINC00397-202ENST00000606785 TATP17735 454 aaPredicted RBP7.87□□□□□ -1.15
LINC00397-202ENST00000606785 INSM2Q96T92 566 aaPredicted RBP7.87□□□□□ -1.15
LINC00397-202ENST00000606785 TINF2Q9BSI4 451 aa7.87□□□□□ -1.15
LINC00397-202ENST00000606785 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
LINC00397-202ENST00000606785 CCSER2Q9H7U1 834 aa7.87□□□□□ -1.15
LINC00397-202ENST00000606785 DMGDHQ9UI17 866 aaKnown RBP7.87□□□□□ -1.15
LINC00397-202ENST00000606785 ADAMTS8Q9UP79 889 aa7.87□□□□□ -1.15
LINC00397-202ENST00000606785 SPINT1O43278 529 aa7.86□□□□□ -1.15
LINC00397-202ENST00000606785 EIF4BP23588 611 aaKnown RBP7.86□□□□□ -1.15
LINC00397-202ENST00000606785 IDH3AP50213 366 aa7.86□□□□□ -1.15
LINC00397-202ENST00000606785 XKR5Q6UX68 686 aa7.86□□□□□ -1.15
LINC00397-202ENST00000606785 ZNF280CQ8ND82 737 aa7.86□□□□□ -1.15
LINC00397-202ENST00000606785 ANKIB1Q9P2G1 1089 aa7.86□□□□□ -1.15
LINC00397-202ENST00000606785 TNFRSF21O75509 655 aa7.85□□□□□ -1.15
LINC00397-202ENST00000606785 ARSDP51689 593 aa7.85□□□□□ -1.15
LINC00397-202ENST00000606785 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
LINC00397-202ENST00000606785 NBPF10Q6P3W6 841 aaKnown RBP7.85□□□□□ -1.15
LINC00397-202ENST00000606785 SLC43A3Q8NBI5 491 aa7.85□□□□□ -1.15
LINC00397-202ENST00000606785 KLRG1Q96E93 195 aa7.85□□□□□ -1.15
LINC00397-202ENST00000606785 POLMQ9NP87 494 aaPredicted RBP7.85□□□□□ -1.15
LINC00397-202ENST00000606785 FNDC3AQ9Y2H6 1198 aaKnown RBP7.85□□□□□ -1.15
LINC00397-202ENST00000606785 GIPC1O14908 333 aa7.84□□□□□ -1.15
LINC00397-202ENST00000606785 INPP5BP32019 993 aa7.84□□□□□ -1.15
LINC00397-202ENST00000606785 PHKA2P46019 1235 aa7.84□□□□□ -1.15
LINC00397-202ENST00000606785 PDE12Q6L8Q7 609 aaKnown RBP7.84□□□□□ -1.15
LINC00397-202ENST00000606785 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.15
LINC00397-202ENST00000606785 SNX29Q8TEQ0 813 aa7.84□□□□□ -1.15
LINC00397-202ENST00000606785 HSH2DQ96JZ2 352 aa7.84□□□□□ -1.15
LINC00397-202ENST00000606785 TANGO6Q9C0B7 1094 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms