RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 TRIM28Q13263 835 aaKnown RBP21.91■■□□□ 1.1
AP3D1-211ENST00000591650 C20orf194Q5TEA3 1177 aa21.91■■□□□ 1.1
AP3D1-211ENST00000591650 SUSD4Q5VX71 490 aa21.91■■□□□ 1.1
AP3D1-211ENST00000591650 FTSJ3Q8IY81 847 aaKnown RBP21.91■■□□□ 1.1
AP3D1-211ENST00000591650 PANK1Q8TE04 598 aa21.91■■□□□ 1.1
AP3D1-211ENST00000591650 SRCIN1Q9C0H9 1055 aa21.91■■□□□ 1.1
AP3D1-211ENST00000591650 LRP5O75197 1615 aa21.91■■□□□ 1.1
AP3D1-211ENST00000591650 NTSR2O95665 410 aa21.9■■□□□ 1.1
AP3D1-211ENST00000591650 PARP10Q53GL7 1025 aa21.9■■□□□ 1.1
AP3D1-211ENST00000591650 DZIP1LQ8IYY4 767 aaKnown RBP21.9■■□□□ 1.1
AP3D1-211ENST00000591650 TMEM57Q8N5G2 664 aa21.9■■□□□ 1.1
AP3D1-211ENST00000591650 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
AP3D1-211ENST00000591650 ABCC12Q96J65 1359 aa21.9■■□□□ 1.1
AP3D1-211ENST00000591650 CWC25Q9NXE8 425 aaPredicted RBP21.9■■□□□ 1.1
AP3D1-211ENST00000591650 SUPT16HQ9Y5B9 1047 aaKnown RBP21.9■■□□□ 1.1
AP3D1-211ENST00000591650 MYH3P11055 1940 aa21.9■■□□□ 1.1
AP3D1-211ENST00000591650 POLD1P28340 1107 aa21.89■■□□□ 1.1
AP3D1-211ENST00000591650 CCDC191Q8NCU4 936 aa21.89■■□□□ 1.1
AP3D1-211ENST00000591650 COL11A2P13942 1736 aaPredicted RBP21.89■■□□□ 1.09
AP3D1-211ENST00000591650 ALDH1L1O75891 902 aa21.89■■□□□ 1.09
AP3D1-211ENST00000591650 SERPINB2P05120 415 aa21.89■■□□□ 1.09
AP3D1-211ENST00000591650 CCT4P50991 539 aaKnown RBP21.89■■□□□ 1.09
AP3D1-211ENST00000591650 INTS3Q68E01 1043 aaKnown RBP21.89■■□□□ 1.09
AP3D1-211ENST00000591650 NBPF5PQ86XG9 351 aaPredicted RBP21.89■■□□□ 1.09
AP3D1-211ENST00000591650 PARP3Q9Y6F1 533 aa21.89■■□□□ 1.09
AP3D1-211ENST00000591650 C10orf71Q711Q0 1435 aa21.88■■□□□ 1.09
AP3D1-211ENST00000591650 KIAA1551Q9HCM1 1747 aa21.88■■□□□ 1.09
AP3D1-211ENST00000591650 GCKRQ14397 625 aa21.88■■□□□ 1.09
AP3D1-211ENST00000591650 PRR5LQ6MZQ0 368 aa21.87■■□□□ 1.09
AP3D1-211ENST00000591650 NUTM1Q86Y26 1132 aa21.87■■□□□ 1.09
AP3D1-211ENST00000591650 CNBD1Q8NA66 436 aa21.87■■□□□ 1.09
AP3D1-211ENST00000591650 UTP14AQ9BVJ6 771 aaKnown RBP21.87■■□□□ 1.09
AP3D1-211ENST00000591650 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
AP3D1-211ENST00000591650 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
AP3D1-211ENST00000591650 PPP1R42Q7Z4L9 355 aa21.86■■□□□ 1.09
AP3D1-211ENST00000591650 SYNE4Q8N205 404 aa21.86■■□□□ 1.09
AP3D1-211ENST00000591650 CCDC24Q8N4L8 307 aa21.86■■□□□ 1.09
AP3D1-211ENST00000591650 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
AP3D1-211ENST00000591650 ERFEQ4G0M1 354 aa21.85■■□□□ 1.09
AP3D1-211ENST00000591650 ITPRIPQ8IWB1 547 aa21.85■■□□□ 1.09
AP3D1-211ENST00000591650 NYXQ9GZU5 481 aa21.85■■□□□ 1.09
AP3D1-211ENST00000591650 MS4A1P11836 297 aa21.84■■□□□ 1.09
AP3D1-211ENST00000591650 PDE3AQ14432 1141 aa21.84■■□□□ 1.09
AP3D1-211ENST00000591650 UBE3BQ7Z3V4 1068 aa21.84■■□□□ 1.09
AP3D1-211ENST00000591650 FAM89AQ96GI7 184 aa21.84■■□□□ 1.09
AP3D1-211ENST00000591650 RIC1Q4ADV7 1423 aa21.84■■□□□ 1.09
AP3D1-211ENST00000591650 DLEC1Q9Y238 1755 aa21.84■■□□□ 1.09
AP3D1-211ENST00000591650 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.09
AP3D1-211ENST00000591650 PCCAP05165 728 aaPredicted RBP21.83■■□□□ 1.09
AP3D1-211ENST00000591650 CASP7P55210 303 aa21.83■■□□□ 1.09
AP3D1-211ENST00000591650 ZBTB38Q8NAP3 1195 aaPredicted RBP21.83■■□□□ 1.09
AP3D1-211ENST00000591650 COG6Q9Y2V7 657 aa21.83■■□□□ 1.09
AP3D1-211ENST00000591650 GRM8O00222 908 aa21.82■■□□□ 1.08
AP3D1-211ENST00000591650 TPTE2Q6XPS3 522 aa21.82■■□□□ 1.08
AP3D1-211ENST00000591650 MEIS3Q99687 375 aa21.82■■□□□ 1.08
AP3D1-211ENST00000591650 H7C1W4 665 aa21.81■■□□□ 1.08
AP3D1-211ENST00000591650 NPHP1O15259 732 aa21.81■■□□□ 1.08
AP3D1-211ENST00000591650 NBPF7P0C2Y1 421 aaPredicted RBP21.81■■□□□ 1.08
AP3D1-211ENST00000591650 MVPQ14764 893 aaKnown RBP21.81■■□□□ 1.08
AP3D1-211ENST00000591650 USP44Q9H0E7 712 aa21.81■■□□□ 1.08
AP3D1-211ENST00000591650 PPP1R1BQ9UD71 204 aaPredicted RBP21.81■■□□□ 1.08
AP3D1-211ENST00000591650 UTYO14607 1347 aa21.81■■□□□ 1.08
AP3D1-211ENST00000591650 CDHR2Q9BYE9 1310 aa21.81■■□□□ 1.08
AP3D1-211ENST00000591650 ST5P78524 1137 aa21.8■■□□□ 1.08
AP3D1-211ENST00000591650 C9orf78Q9NZ63 289 aaPredicted RBP21.8■■□□□ 1.08
AP3D1-211ENST00000591650 CACNA1SQ13698 1873 aa21.8■■□□□ 1.08
AP3D1-211ENST00000591650 HCLS1P14317 486 aaPredicted RBP21.8■■□□□ 1.08
AP3D1-211ENST00000591650 GTF2E1P29083 439 aaPredicted RBP21.8■■□□□ 1.08
AP3D1-211ENST00000591650 FHDC1Q9C0D6 1143 aaPredicted RBP21.8■■□□□ 1.08
AP3D1-211ENST00000591650 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
AP3D1-211ENST00000591650 C3orf67Q6ZVT6 689 aa21.79■■□□□ 1.08
AP3D1-211ENST00000591650 KLHL34Q8N239 644 aa21.78■■□□□ 1.08
AP3D1-211ENST00000591650 TAF1P21675 1872 aa21.78■■□□□ 1.08
AP3D1-211ENST00000591650 BRCA1P38398 1863 aaKnown RBP21.78■■□□□ 1.08
AP3D1-211ENST00000591650 COL4A1P02462 1669 aa21.77■■□□□ 1.08
AP3D1-211ENST00000591650 IRX6P78412 446 aaPredicted RBP21.77■■□□□ 1.08
AP3D1-211ENST00000591650 SUCLG2Q96I99 432 aa21.77■■□□□ 1.08
AP3D1-211ENST00000591650 CRBNQ96SW2 442 aa21.77■■□□□ 1.08
AP3D1-211ENST00000591650 SPEF2Q9C093 1822 aa21.77■■□□□ 1.07
AP3D1-211ENST00000591650 SLC10A5Q5PT55 438 aa21.76■■□□□ 1.07
AP3D1-211ENST00000591650 SYT17Q9BSW7 474 aa21.76■■□□□ 1.07
AP3D1-211ENST00000591650 UBTFL1P0CB47 393 aaPredicted RBP21.75■■□□□ 1.07
AP3D1-211ENST00000591650 KAZALD1Q96I82 304 aa21.75■■□□□ 1.07
AP3D1-211ENST00000591650 BRIP1Q9BX63 1249 aa21.75■■□□□ 1.07
AP3D1-211ENST00000591650 DDX19BQ9UMR2 479 aa21.75■■□□□ 1.07
AP3D1-211ENST00000591650 CD2APQ9Y5K6 639 aa21.75■■□□□ 1.07
AP3D1-211ENST00000591650 ZBTB7BO15156 539 aaPredicted RBP21.74■■□□□ 1.07
AP3D1-211ENST00000591650 EPHA10Q5JZY3 1008 aa21.74■■□□□ 1.07
AP3D1-211ENST00000591650 NLGN2Q8NFZ4 835 aa21.74■■□□□ 1.07
AP3D1-211ENST00000591650 GNAI3P08754 354 aa21.73■■□□□ 1.07
AP3D1-211ENST00000591650 PLA2G12BQ9BX93 195 aa21.73■■□□□ 1.07
AP3D1-211ENST00000591650 C1orf115Q9H7X2 142 aa21.73■■□□□ 1.07
AP3D1-211ENST00000591650 LRRFIP2Q9Y608 721 aaKnown RBP21.73■■□□□ 1.07
AP3D1-211ENST00000591650 PDE8AO60658 829 aa21.72■■□□□ 1.07
AP3D1-211ENST00000591650 CTSWP56202 376 aa21.72■■□□□ 1.07
AP3D1-211ENST00000591650 FOXO4P98177 505 aa21.72■■□□□ 1.07
AP3D1-211ENST00000591650 ANKRD44Q8N8A2 993 aa21.72■■□□□ 1.07
AP3D1-211ENST00000591650 BICC1Q9H694 974 aaKnown RBP21.72■■□□□ 1.07
AP3D1-211ENST00000591650 KLRG2A4D1S0 409 aaPredicted RBP21.71■■□□□ 1.07
AP3D1-211ENST00000591650 CHRNA5P30532 468 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms