RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 CST9Q5W186 159 aa19.76■□□□□ 0.75
RANBP3-208ENST00000587263 MCOLN1Q9GZU1 580 aa19.76■□□□□ 0.75
RANBP3-208ENST00000587263 COL4A5P29400 1685 aa19.75■□□□□ 0.75
RANBP3-208ENST00000587263 COL3A1P02461 1466 aaPredicted RBP19.75■□□□□ 0.75
RANBP3-208ENST00000587263 TRAF5O00463 557 aa19.75■□□□□ 0.75
RANBP3-208ENST00000587263 CRY2Q49AN0 593 aa19.75■□□□□ 0.75
RANBP3-208ENST00000587263 LARGE2Q8N3Y3 721 aa19.75■□□□□ 0.75
RANBP3-208ENST00000587263 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
RANBP3-208ENST00000587263 AOC2O75106 756 aa19.74■□□□□ 0.75
RANBP3-208ENST00000587263 PRAMEF22A3QJZ6 481 aa19.73■□□□□ 0.75
RANBP3-208ENST00000587263 NYXQ9GZU5 481 aa19.73■□□□□ 0.75
RANBP3-208ENST00000587263 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
RANBP3-208ENST00000587263 SAPCD2Q86UD0 394 aa19.72■□□□□ 0.75
RANBP3-208ENST00000587263 NIM1KQ8IY84 436 aa19.72■□□□□ 0.75
RANBP3-208ENST00000587263 RPGRQ92834 1020 aaKnown RBP19.72■□□□□ 0.75
RANBP3-208ENST00000587263 HHIPL1Q96JK4 782 aa19.72■□□□□ 0.75
RANBP3-208ENST00000587263 ADARB2Q9NS39 739 aaKnown RBP19.72■□□□□ 0.75
RANBP3-208ENST00000587263 ABCC12Q96J65 1359 aa19.71■□□□□ 0.75
RANBP3-208ENST00000587263 NBPF26B4DH59 902 aa19.71■□□□□ 0.75
RANBP3-208ENST00000587263 NBPF10Q6P3W6 841 aaKnown RBP19.71■□□□□ 0.75
RANBP3-208ENST00000587263 NBPF15Q8N660 670 aa19.71■□□□□ 0.75
RANBP3-208ENST00000587263 RIC1Q4ADV7 1423 aa19.7■□□□□ 0.74
RANBP3-208ENST00000587263 CELF2O95319 508 aaKnown RBP19.7■□□□□ 0.74
RANBP3-208ENST00000587263 DGKZQ13574 1117 aa19.7■□□□□ 0.74
RANBP3-208ENST00000587263 HLFQ16534 295 aa19.7■□□□□ 0.74
RANBP3-208ENST00000587263 CC2D1BQ5T0F9 858 aaKnown RBP19.7■□□□□ 0.74
RANBP3-208ENST00000587263 HOXA10P31260 410 aaPredicted RBP19.69■□□□□ 0.74
RANBP3-208ENST00000587263 GPRC5DQ9NZD1 345 aa19.69■□□□□ 0.74
RANBP3-208ENST00000587263 KIF7Q2M1P5 1343 aa19.69■□□□□ 0.74
RANBP3-208ENST00000587263 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
RANBP3-208ENST00000587263 CCER1Q8TC90 406 aaPredicted RBP19.68■□□□□ 0.74
RANBP3-208ENST00000587263 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
RANBP3-208ENST00000587263 PPEF1O14829 653 aaPredicted RBP19.67■□□□□ 0.74
RANBP3-208ENST00000587263 PPIP5K2O43314 1243 aa19.67■□□□□ 0.74
RANBP3-208ENST00000587263 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
RANBP3-208ENST00000587263 PHACTR3Q96KR7 559 aa19.67■□□□□ 0.74
RANBP3-208ENST00000587263 VPS33BQ9H267 617 aa19.67■□□□□ 0.74
RANBP3-208ENST00000587263 IBTKQ9P2D0 1353 aaPredicted RBP19.67■□□□□ 0.74
RANBP3-208ENST00000587263 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
RANBP3-208ENST00000587263 RBM17Q96I25 401 aaKnown RBP19.66■□□□□ 0.74
RANBP3-208ENST00000587263 CRAMP1Q96RY5 1269 aa19.66■□□□□ 0.74
RANBP3-208ENST00000587263 TMX4Q9H1E5 349 aaPredicted RBP19.66■□□□□ 0.74
RANBP3-208ENST00000587263 PDE4DIPQ5VU43 2346 aa19.66■□□□□ 0.74
RANBP3-208ENST00000587263 CASP8AP2Q9UKL3 1982 aa19.66■□□□□ 0.74
RANBP3-208ENST00000587263 ERVV-1B6SEH8 477 aa19.65■□□□□ 0.74
RANBP3-208ENST00000587263 NOGQ13253 232 aa19.65■□□□□ 0.74
RANBP3-208ENST00000587263 CIAPIN1Q6FI81 312 aa19.65■□□□□ 0.74
RANBP3-208ENST00000587263 GLIS2Q9BZE0 524 aaPredicted RBP19.65■□□□□ 0.74
RANBP3-208ENST00000587263 CDHR2Q9BYE9 1310 aa19.65■□□□□ 0.74
RANBP3-208ENST00000587263 NPC1L1Q9UHC9 1359 aa19.65■□□□□ 0.74
RANBP3-208ENST00000587263 AOC3Q16853 763 aa19.64■□□□□ 0.73
RANBP3-208ENST00000587263 RSPH6AQ9H0K4 717 aa19.64■□□□□ 0.73
RANBP3-208ENST00000587263 PGAP2Q9UHJ9 254 aa19.64■□□□□ 0.73
RANBP3-208ENST00000587263 LAMB4A4D0S4 1761 aa19.63■□□□□ 0.73
RANBP3-208ENST00000587263 MAP3K15Q6ZN16 1313 aa19.63■□□□□ 0.73
RANBP3-208ENST00000587263 TCERG1O14776 1098 aaKnown RBP19.63■□□□□ 0.73
RANBP3-208ENST00000587263 MCM10Q7L590 875 aa19.63■□□□□ 0.73
RANBP3-208ENST00000587263 SUPT20HQ8NEM7 779 aa19.63■□□□□ 0.73
RANBP3-208ENST00000587263 ZC3H15Q8WU90 426 aaKnown RBP19.63■□□□□ 0.73
RANBP3-208ENST00000587263 ZNF408Q9H9D4 720 aa19.63■□□□□ 0.73
RANBP3-208ENST00000587263 ZNRF3Q9ULT6 936 aa19.63■□□□□ 0.73
RANBP3-208ENST00000587263 GMPSP49915 693 aaPredicted RBP19.62■□□□□ 0.73
RANBP3-208ENST00000587263 CXCL9Q07325 125 aa19.62■□□□□ 0.73
RANBP3-208ENST00000587263 KIF6Q6ZMV9 814 aa19.62■□□□□ 0.73
RANBP3-208ENST00000587263 CDC37L1Q7L3B6 337 aa19.62■□□□□ 0.73
RANBP3-208ENST00000587263 TNRC18O15417 2968 aaPredicted RBP19.62■□□□□ 0.73
RANBP3-208ENST00000587263 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
RANBP3-208ENST00000587263 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
RANBP3-208ENST00000587263 UBN2Q6ZU65 1347 aa19.6■□□□□ 0.73
RANBP3-208ENST00000587263 GPTP24298 496 aa19.6■□□□□ 0.73
RANBP3-208ENST00000587263 SLC51AQ86UW1 340 aa19.6■□□□□ 0.73
RANBP3-208ENST00000587263 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
RANBP3-208ENST00000587263 ATP6V0A2Q9Y487 856 aa19.6■□□□□ 0.73
RANBP3-208ENST00000587263 NUP98P52948 1817 aa19.6■□□□□ 0.73
RANBP3-208ENST00000587263 HTATSF1O43719 755 aaKnown RBP19.59■□□□□ 0.73
RANBP3-208ENST00000587263 NUDCQ9Y266 331 aa19.59■□□□□ 0.73
RANBP3-208ENST00000587263 HUNKP57058 714 aa19.58■□□□□ 0.72
RANBP3-208ENST00000587263 TNIP1Q15025 636 aa19.58■□□□□ 0.72
RANBP3-208ENST00000587263 TAF7Q15545 349 aaPredicted RBP19.58■□□□□ 0.72
RANBP3-208ENST00000587263 SUSD4Q5VX71 490 aa19.58■□□□□ 0.72
RANBP3-208ENST00000587263 RTFDC1Q9BY42 306 aaPredicted RBP19.58■□□□□ 0.72
RANBP3-208ENST00000587263 SAGE1Q9NXZ1 904 aa19.58■□□□□ 0.72
RANBP3-208ENST00000587263 NTSR2O95665 410 aa19.57■□□□□ 0.72
RANBP3-208ENST00000587263 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
RANBP3-208ENST00000587263 DCTN1Q14203 1278 aa19.57■□□□□ 0.72
RANBP3-208ENST00000587263 TTLL7Q6ZT98 887 aa19.57■□□□□ 0.72
RANBP3-208ENST00000587263 NLRP3Q96P20 1036 aa19.57■□□□□ 0.72
RANBP3-208ENST00000587263 HIRAP54198 1017 aaPredicted RBP19.56■□□□□ 0.72
RANBP3-208ENST00000587263 DPP8Q6V1X1 898 aaPredicted RBP19.56■□□□□ 0.72
RANBP3-208ENST00000587263 PPP1R42Q7Z4L9 355 aa19.56■□□□□ 0.72
RANBP3-208ENST00000587263 TRPM4Q8TD43 1214 aa19.56■□□□□ 0.72
RANBP3-208ENST00000587263 ZIC5Q96T25 663 aa19.56■□□□□ 0.72
RANBP3-208ENST00000587263 ZBTB3Q9H5J0 574 aa19.56■□□□□ 0.72
RANBP3-208ENST00000587263 RRP7AQ9Y3A4 280 aaKnown RBP19.56■□□□□ 0.72
RANBP3-208ENST00000587263 SOX10P56693 466 aa19.55■□□□□ 0.72
RANBP3-208ENST00000587263 KIAA2012Q0VF49 1180 aa19.55■□□□□ 0.72
RANBP3-208ENST00000587263 PARP10Q53GL7 1025 aa19.55■□□□□ 0.72
RANBP3-208ENST00000587263 PRPF38BQ5VTL8 546 aaKnown RBP19.55■□□□□ 0.72
RANBP3-208ENST00000587263 C3orf67Q6ZVT6 689 aa19.55■□□□□ 0.72
RANBP3-208ENST00000587263 ZNF34Q8IZ26 560 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms