RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 CYP27B1O15528 508 aa15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 ANKRD13DQ6ZTN6 518 aa15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 TMEM63CQ9P1W3 806 aa15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 NSFL1CQ9UNZ2 370 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 USP16Q9Y5T5 823 aa15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 DCCP43146 1447 aa15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 PRPF40BQ6NWY9 871 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 RUFY3Q7L099 469 aa15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 KLHDC4Q8TBB5 520 aa15.88■□□□□ 0.13
CSNK1D-222ENST00000584377 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 LARP6Q9BRS8 491 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 TLR7Q9NYK1 1049 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 TNS3Q68CZ2 1445 aa15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 HIP1O00291 1037 aa15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 CPA1P15085 419 aa15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 FOXD4L6Q3SYB3 417 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 EPHA10Q5JZY3 1008 aa15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 FOXD4L3Q6VB84 417 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 FMNL2Q96PY5 1086 aa15.87■□□□□ 0.13
CSNK1D-222ENST00000584377 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
CSNK1D-222ENST00000584377 CADPS2Q86UW7 1296 aa15.86■□□□□ 0.13
CSNK1D-222ENST00000584377 JAKMIP1Q96N16 626 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-222ENST00000584377 CCDC171Q6TFL3 1326 aa15.86■□□□□ 0.13
CSNK1D-222ENST00000584377 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-222ENST00000584377 ABCC6O95255 1503 aa15.86■□□□□ 0.13
CSNK1D-222ENST00000584377 COL18A1P39060 1754 aa15.86■□□□□ 0.13
CSNK1D-222ENST00000584377 ADCK5Q3MIX3 580 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 FAM227BQ96M60 508 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 RBSNQ9H1K0 784 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 RPAP1Q9BWH6 1393 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 SYCE3A1L190 88 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 ZKSCAN1P17029 563 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 NMIQ13287 307 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 PLEKHG2Q9H7P9 1386 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 MRC1P22897 1456 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 CABP4P57796 275 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 NECTIN1Q15223 517 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 VPS53Q5VIR6 699 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 KCNB2Q92953 911 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 TM6SF1Q9BZW5 370 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 PDRG1Q9NUG6 133 aa15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 ZHX1Q9UKY1 873 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-222ENST00000584377 KCNJ4P48050 445 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 LRSAM1Q6UWE0 723 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 FSD1Q9BTV5 496 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 ZSWIM6Q9HCJ5 1215 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 UQCRHLA0A096LP55 91 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 UQCRHP07919 91 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 MTERF4Q7Z6M4 381 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 JARID2Q92833 1246 aaPredicted RBP15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 ARID3AQ99856 593 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 GDPD2Q9HCC8 539 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 SMC3Q9UQE7 1217 aa15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 RBM8AQ9Y5S9 174 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-222ENST00000584377 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.13
CSNK1D-222ENST00000584377 COPRSQ9NQ92 184 aa15.83■□□□□ 0.13
CSNK1D-222ENST00000584377 UBE3BQ7Z3V4 1068 aa15.83■□□□□ 0.12
CSNK1D-222ENST00000584377 MAP4K1Q92918 833 aa15.83■□□□□ 0.12
CSNK1D-222ENST00000584377 LARGE1O95461 756 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 CREB3L3Q68CJ9 461 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 A0A0D9SFI3 127 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 STX6O43752 255 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 ZSCAN22P10073 491 aaPredicted RBP15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 SYT1P21579 422 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 USP48Q86UV5 1035 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 PRDM10Q9NQV6 1147 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 CPDO75976 1380 aa15.82■□□□□ 0.12
CSNK1D-222ENST00000584377 ATP5J2-PTCD1G3V325 749 aa15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 PTCD1O75127 700 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 CCDC83Q8IWF9 413 aa15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 SYAP1Q96A49 352 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 ZSCAN31Q96LW9 406 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 SNRKQ9NRH2 765 aa15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 SH2B1Q9NRF2 756 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 A0A087WZG4 1122 aa15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 GADD45BO75293 160 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 RFX5P48382 616 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 PTPN12Q05209 780 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 DDX54Q8TDD1 881 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-222ENST00000584377 RABL6Q3YEC7 729 aaPredicted RBP15.8■□□□□ 0.12
CSNK1D-222ENST00000584377 PKD1L3Q7Z443 1732 aa15.8■□□□□ 0.12
CSNK1D-222ENST00000584377 SLC27A2O14975 620 aa15.8■□□□□ 0.12
CSNK1D-222ENST00000584377 PLBD2Q8NHP8 589 aa15.8■□□□□ 0.12
CSNK1D-222ENST00000584377 DBNLQ9UJU6 430 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-222ENST00000584377 DYNC1I1O14576 645 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 ZNF500O60304 480 aaPredicted RBP15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 PSMA5P28066 241 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 TFCP2Q12800 502 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 TNNI3KQ59H18 835 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 RNF20Q5VTR2 975 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 FPGT-TNNI3KV9GXZ4 949 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 GJB2P29033 226 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 COL15A1P39059 1388 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
CSNK1D-222ENST00000584377 F13A1P00488 732 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms