RNA–Protein interactions for RNA: ENST00000583217.1

EIF4A1-227, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-227ENST00000583217 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
EIF4A1-227ENST00000583217 TLL2Q9Y6L7 1015 aa12.49□□□□□ -0.41
EIF4A1-227ENST00000583217 U2SURPO15042 1029 aaKnown RBP12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 NPM2Q86SE8 214 aaKnown RBP12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 MCOLN1Q9GZU1 580 aa12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
EIF4A1-227ENST00000583217 MAP2K2P36507 400 aa12.47□□□□□ -0.41
EIF4A1-227ENST00000583217 EIF6P56537 245 aaKnown RBP12.47□□□□□ -0.41
EIF4A1-227ENST00000583217 GRM1Q13255 1194 aa12.47□□□□□ -0.41
EIF4A1-227ENST00000583217 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
EIF4A1-227ENST00000583217 SAPCD2Q86UD0 394 aa12.47□□□□□ -0.41
EIF4A1-227ENST00000583217 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
EIF4A1-227ENST00000583217 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
EIF4A1-227ENST00000583217 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
EIF4A1-227ENST00000583217 ECE1P42892 770 aa12.46□□□□□ -0.41
EIF4A1-227ENST00000583217 USP50Q70EL3 339 aaPredicted RBP12.46□□□□□ -0.41
EIF4A1-227ENST00000583217 MCM10Q7L590 875 aa12.46□□□□□ -0.41
EIF4A1-227ENST00000583217 ZIC5Q96T25 663 aa12.46□□□□□ -0.41
EIF4A1-227ENST00000583217 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
EIF4A1-227ENST00000583217 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
EIF4A1-227ENST00000583217 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
EIF4A1-227ENST00000583217 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
EIF4A1-227ENST00000583217 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
EIF4A1-227ENST00000583217 CASP8AP2Q9UKL3 1982 aa12.44□□□□□ -0.42
EIF4A1-227ENST00000583217 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
EIF4A1-227ENST00000583217 HIRAP54198 1017 aaPredicted RBP12.44□□□□□ -0.42
EIF4A1-227ENST00000583217 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
EIF4A1-227ENST00000583217 GPRC5DQ9NZD1 345 aa12.44□□□□□ -0.42
EIF4A1-227ENST00000583217 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
EIF4A1-227ENST00000583217 TRPM7Q96QT4 1865 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 CXCL9Q07325 125 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 SUSD4Q5VX71 490 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 DLK2Q6UY11 383 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 CRAMP1Q96RY5 1269 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 GLIS2Q9BZE0 524 aaPredicted RBP12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 RIC1Q4ADV7 1423 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
EIF4A1-227ENST00000583217 ERVV-1B6SEH8 477 aa12.42□□□□□ -0.42
EIF4A1-227ENST00000583217 TCERG1O14776 1098 aaKnown RBP12.42□□□□□ -0.42
EIF4A1-227ENST00000583217 CELF2O95319 508 aaKnown RBP12.42□□□□□ -0.42
EIF4A1-227ENST00000583217 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
EIF4A1-227ENST00000583217 CIAPIN1Q6FI81 312 aa12.42□□□□□ -0.42
EIF4A1-227ENST00000583217 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
EIF4A1-227ENST00000583217 ADARB2Q9NS39 739 aaKnown RBP12.42□□□□□ -0.42
EIF4A1-227ENST00000583217 SHTN1A0MZ66 631 aa12.41□□□□□ -0.42
EIF4A1-227ENST00000583217 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
EIF4A1-227ENST00000583217 AOC3Q16853 763 aa12.41□□□□□ -0.42
EIF4A1-227ENST00000583217 ZNF34Q8IZ26 560 aa12.41□□□□□ -0.42
EIF4A1-227ENST00000583217 NGEFQ8N5V2 710 aa12.41□□□□□ -0.42
EIF4A1-227ENST00000583217 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 PPIP5K2O43314 1243 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 CA12O43570 354 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 NTSR2O95665 410 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 GPTP24298 496 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 DGKZQ13574 1117 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 GRIPAP1Q4V328 841 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 TRPM4Q8TD43 1214 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
EIF4A1-227ENST00000583217 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
EIF4A1-227ENST00000583217 CFAP44Q96MT7 982 aa12.39□□□□□ -0.43
EIF4A1-227ENST00000583217 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
EIF4A1-227ENST00000583217 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
EIF4A1-227ENST00000583217 FAM155AB1AL88 458 aaPredicted RBP12.38□□□□□ -0.43
EIF4A1-227ENST00000583217 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
EIF4A1-227ENST00000583217 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
EIF4A1-227ENST00000583217 ATP6V0A2Q9Y487 856 aa12.38□□□□□ -0.43
EIF4A1-227ENST00000583217 NUP98P52948 1817 aa12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 YDJCA8MPS7 323 aa12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 RAD17O75943 681 aa12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 ZC3H15Q8WU90 426 aaKnown RBP12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 VPS33BQ9H267 617 aa12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 ZBTB3Q9H5J0 574 aa12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 ABCC4O15439 1325 aa12.37□□□□□ -0.43
EIF4A1-227ENST00000583217 EIF4A1P60842 406 aaKnown RBP12.36□□□□□ -0.43
EIF4A1-227ENST00000583217 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
EIF4A1-227ENST00000583217 ZNF408Q9H9D4 720 aa12.36□□□□□ -0.43
EIF4A1-227ENST00000583217 EGFRP00533 1210 aa12.35□□□□□ -0.43
EIF4A1-227ENST00000583217 U2AF1L5P0DN76 240 aaPredicted RBP12.35□□□□□ -0.43
EIF4A1-227ENST00000583217 MYL6BP14649 208 aa12.35□□□□□ -0.43
EIF4A1-227ENST00000583217 U2AF1Q01081 240 aaKnown RBP eCLIP12.35□□□□□ -0.432e-8■■■■■ 31.3
EIF4A1-227ENST00000583217 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
EIF4A1-227ENST00000583217 NOGQ13253 232 aa12.35□□□□□ -0.43
EIF4A1-227ENST00000583217 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
EIF4A1-227ENST00000583217 CDC37L1Q7L3B6 337 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms