RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 A0A0C4DFX4 3053 aa11.22□□□□□ -0.61
CDK5RAP3-221ENST00000581662 IQCA1LA6NCM1 817 aa11.22□□□□□ -0.61
CDK5RAP3-221ENST00000581662 KDRP35968 1356 aa11.22□□□□□ -0.61
CDK5RAP3-221ENST00000581662 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
CDK5RAP3-221ENST00000581662 CENPJQ9HC77 1338 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-221ENST00000581662 ABT1Q9ULW3 272 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-221ENST00000581662 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 ECE1P42892 770 aa11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 ERFEQ4G0M1 354 aa11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 LTV1Q96GA3 475 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-221ENST00000581662 CASP8AP2Q9UKL3 1982 aa11.21□□□□□ -0.62
CDK5RAP3-221ENST00000581662 SMG6Q86US8 1419 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-221ENST00000581662 KTN1Q86UP2 1357 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-221ENST00000581662 MAP2K2P36507 400 aa11.2□□□□□ -0.62
CDK5RAP3-221ENST00000581662 ANKK1Q8NFD2 765 aa11.2□□□□□ -0.62
CDK5RAP3-221ENST00000581662 SZT2Q5T011 3432 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 SBNO2Q9Y2G9 1366 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 ITGB4P16144 1822 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 DLEC1Q9Y238 1755 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 MAP3K19Q56UN5 1328 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 CYP27B1O15528 508 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 NME9Q86XW9 330 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 SCN4AP35499 1836 aa11.19□□□□□ -0.62
CDK5RAP3-221ENST00000581662 POLRMTO00411 1230 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-221ENST00000581662 AOC2O75106 756 aa11.18□□□□□ -0.62
CDK5RAP3-221ENST00000581662 CNTROBQ8N137 903 aa11.18□□□□□ -0.62
CDK5RAP3-221ENST00000581662 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-221ENST00000581662 DICER1Q9UPY3 1922 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 CCDC88AQ3V6T2 1871 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 CNTNAP4Q9C0A0 1308 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 RFC4P35249 363 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 MAP1SQ66K74 1059 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 LAPTM4BQ86VI4 370 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 PACS2Q86VP3 889 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 TTLL6Q8N841 843 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 DDX21Q9NR30 783 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 ASAP1Q9ULH1 1129 aa11.17□□□□□ -0.62
CDK5RAP3-221ENST00000581662 RGPD2P0DJD1 1756 aa11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 NBPF6Q5VWK0 638 aa11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 NBPF4Q96M43 638 aa11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 INSRP06213 1382 aa11.16□□□□□ -0.62
CDK5RAP3-221ENST00000581662 USP42Q9H9J4 1324 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-221ENST00000581662 ZNF831Q5JPB2 1677 aa11.15□□□□□ -0.62
CDK5RAP3-221ENST00000581662 RPS6KA4O75676 772 aa11.15□□□□□ -0.62
CDK5RAP3-221ENST00000581662 HOXC9P31274 260 aa11.15□□□□□ -0.62
CDK5RAP3-221ENST00000581662 GRM1Q13255 1194 aa11.15□□□□□ -0.62
CDK5RAP3-221ENST00000581662 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-221ENST00000581662 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
CDK5RAP3-221ENST00000581662 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-221ENST00000581662 TM4SF1P30408 202 aa11.14□□□□□ -0.63
CDK5RAP3-221ENST00000581662 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
CDK5RAP3-221ENST00000581662 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-221ENST00000581662 SRP68Q9UHB9 627 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-221ENST00000581662 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-221ENST00000581662 EVC2Q86UK5 1308 aa11.13□□□□□ -0.63
CDK5RAP3-221ENST00000581662 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
CDK5RAP3-221ENST00000581662 NRXN2Q9P2S2 1712 aa11.13□□□□□ -0.63
CDK5RAP3-221ENST00000581662 OSBPP22059 807 aa11.13□□□□□ -0.63
CDK5RAP3-221ENST00000581662 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDK5RAP3-221ENST00000581662 USHBP1Q8N6Y0 703 aa11.13□□□□□ -0.63
CDK5RAP3-221ENST00000581662 SLC17A8Q8NDX2 589 aa11.13□□□□□ -0.63
CDK5RAP3-221ENST00000581662 TATP17735 454 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-221ENST00000581662 EPHX2P34913 555 aa11.12□□□□□ -0.63
CDK5RAP3-221ENST00000581662 BCAMP50895 628 aa11.12□□□□□ -0.63
CDK5RAP3-221ENST00000581662 CST9Q5W186 159 aa11.12□□□□□ -0.63
CDK5RAP3-221ENST00000581662 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
CDK5RAP3-221ENST00000581662 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
CDK5RAP3-221ENST00000581662 HACL1Q9UJ83 578 aa11.12□□□□□ -0.63
CDK5RAP3-221ENST00000581662 PRSS12P56730 875 aa11.11□□□□□ -0.63
CDK5RAP3-221ENST00000581662 PNMA8AQ86V59 439 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-221ENST00000581662 KCNV2Q8TDN2 545 aa11.11□□□□□ -0.63
CDK5RAP3-221ENST00000581662 TAOK3Q9H2K8 898 aa11.11□□□□□ -0.63
CDK5RAP3-221ENST00000581662 ZNF541Q9H0D2 1346 aa11.1□□□□□ -0.63
CDK5RAP3-221ENST00000581662 PLCB2Q00722 1185 aa11.1□□□□□ -0.63
CDK5RAP3-221ENST00000581662 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
CDK5RAP3-221ENST00000581662 TMOD3Q9NYL9 352 aa11.1□□□□□ -0.63
CDK5RAP3-221ENST00000581662 RTL1A6NKG5 1358 aa11.1□□□□□ -0.63
CDK5RAP3-221ENST00000581662 CARMIL3Q8ND23 1372 aa11.1□□□□□ -0.63
CDK5RAP3-221ENST00000581662 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-221ENST00000581662 MYH14Q7Z406 1995 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-221ENST00000581662 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
CDK5RAP3-221ENST00000581662 SAPCD2Q86UD0 394 aa11.09□□□□□ -0.63
CDK5RAP3-221ENST00000581662 C2CD5Q86YS7 1000 aa11.09□□□□□ -0.63
CDK5RAP3-221ENST00000581662 HHIPL1Q96JK4 782 aa11.09□□□□□ -0.63
CDK5RAP3-221ENST00000581662 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
CDK5RAP3-221ENST00000581662 TRIOBPQ9H2D6 2365 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms