RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 ERFEQ4G0M1 354 aa28.91■■■□□ 2.22
NDEL1-207ENST00000580012 CWC25Q9NXE8 425 aaPredicted RBP28.91■■■□□ 2.22
NDEL1-207ENST00000580012 KIF16BQ96L93 1317 aa28.91■■■□□ 2.22
NDEL1-207ENST00000580012 ST5P78524 1137 aa28.9■■■□□ 2.22
NDEL1-207ENST00000580012 NUTM1Q86Y26 1132 aa28.9■■■□□ 2.22
NDEL1-207ENST00000580012 CCDC24Q8N4L8 307 aa28.9■■■□□ 2.22
NDEL1-207ENST00000580012 API5Q9BZZ5 524 aaKnown RBP28.9■■■□□ 2.22
NDEL1-207ENST00000580012 TRMT112Q9UI30 125 aaKnown RBP28.9■■■□□ 2.22
NDEL1-207ENST00000580012 IPO8O15397 1037 aaKnown RBP28.89■■■□□ 2.22
NDEL1-207ENST00000580012 CWF19L2Q2TBE0 894 aaKnown RBP28.89■■■□□ 2.22
NDEL1-207ENST00000580012 RCAN3Q9UKA8 241 aa28.89■■■□□ 2.22
NDEL1-207ENST00000580012 GTF2E1P29083 439 aaPredicted RBP28.88■■■□□ 2.21
NDEL1-207ENST00000580012 SYNE4Q8N205 404 aa28.88■■■□□ 2.21
NDEL1-207ENST00000580012 ZBTB38Q8NAP3 1195 aaPredicted RBP28.88■■■□□ 2.21
NDEL1-207ENST00000580012 NLGN2Q8NFZ4 835 aa28.88■■■□□ 2.21
NDEL1-207ENST00000580012 GCKRQ14397 625 aa28.87■■■□□ 2.21
NDEL1-207ENST00000580012 KLHL34Q8N239 644 aa28.87■■■□□ 2.21
NDEL1-207ENST00000580012 PDZRN3Q9UPQ7 1066 aa28.87■■■□□ 2.21
NDEL1-207ENST00000580012 SH3TC1Q8TE82 1336 aa28.87■■■□□ 2.21
NDEL1-207ENST00000580012 ARFGEF2Q9Y6D5 1785 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 H7C1W4 665 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 NPHP1O15259 732 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 ALDH1L1O75891 902 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 PCCAP05165 728 aaPredicted RBP28.86■■■□□ 2.21
NDEL1-207ENST00000580012 KCNA3P22001 575 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 PDE6BP35913 854 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 FAM89AQ96GI7 184 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 ABCC12Q96J65 1359 aa28.86■■■□□ 2.21
NDEL1-207ENST00000580012 SLC4A10Q6U841 1118 aa28.85■■■□□ 2.21
NDEL1-207ENST00000580012 ATF7IPQ6VMQ6 1270 aa28.85■■■□□ 2.21
NDEL1-207ENST00000580012 RIC1Q4ADV7 1423 aa28.85■■■□□ 2.21
NDEL1-207ENST00000580012 DPEP1P16444 411 aa28.84■■■□□ 2.21
NDEL1-207ENST00000580012 SRCIN1Q9C0H9 1055 aa28.84■■■□□ 2.21
NDEL1-207ENST00000580012 AFDNP55196 1824 aaKnown RBP28.84■■■□□ 2.21
NDEL1-207ENST00000580012 A0A0G2JLW4 131 aa28.83■■■□□ 2.21
NDEL1-207ENST00000580012 TRIM27P14373 513 aa28.83■■■□□ 2.21
NDEL1-207ENST00000580012 PXDNLA1KZ92 1463 aa28.83■■■□□ 2.21
NDEL1-207ENST00000580012 CASP7P55210 303 aa28.82■■■□□ 2.2
NDEL1-207ENST00000580012 ZKSCAN2Q63HK3 967 aa28.82■■■□□ 2.2
NDEL1-207ENST00000580012 FRAT1Q92837 279 aaPredicted RBP28.82■■■□□ 2.2
NDEL1-207ENST00000580012 CHRNA5P30532 468 aa28.81■■■□□ 2.2
NDEL1-207ENST00000580012 CRY2Q49AN0 593 aa28.81■■■□□ 2.2
NDEL1-207ENST00000580012 C2CD5Q86YS7 1000 aa28.81■■■□□ 2.2
NDEL1-207ENST00000580012 ANKRD36CQ5JPF3 1778 aa28.8■■■□□ 2.2
NDEL1-207ENST00000580012 ABCC4O15439 1325 aa28.8■■■□□ 2.2
NDEL1-207ENST00000580012 CDHR2Q9BYE9 1310 aa28.8■■■□□ 2.2
NDEL1-207ENST00000580012 H0YIN7 160 aa28.8■■■□□ 2.2
NDEL1-207ENST00000580012 IRS4O14654 1257 aaPredicted RBP28.8■■■□□ 2.2
NDEL1-207ENST00000580012 SRGNP10124 158 aa28.8■■■□□ 2.2
NDEL1-207ENST00000580012 HCLS1P14317 486 aaPredicted RBP28.8■■■□□ 2.2
NDEL1-207ENST00000580012 C3orf67Q6ZVT6 689 aa28.8■■■□□ 2.2
NDEL1-207ENST00000580012 KIF13BQ9NQT8 1826 aa28.8■■■□□ 2.2
NDEL1-207ENST00000580012 CCT4P50991 539 aaKnown RBP28.79■■■□□ 2.2
NDEL1-207ENST00000580012 INTS3Q68E01 1043 aaKnown RBP28.79■■■□□ 2.2
NDEL1-207ENST00000580012 JARID2Q92833 1246 aaPredicted RBP28.79■■■□□ 2.2
NDEL1-207ENST00000580012 NLRP3Q96P20 1036 aa28.79■■■□□ 2.2
NDEL1-207ENST00000580012 TNNQ9UQP3 1299 aa28.79■■■□□ 2.2
NDEL1-207ENST00000580012 UTYO14607 1347 aa28.77■■■□□ 2.2
NDEL1-207ENST00000580012 RTL5Q5HYW3 569 aaPredicted RBP28.77■■■□□ 2.2
NDEL1-207ENST00000580012 GRM8O00222 908 aa28.76■■■□□ 2.19
NDEL1-207ENST00000580012 HSP90B1P14625 803 aaKnown RBP28.76■■■□□ 2.19
NDEL1-207ENST00000580012 HOXA10P31260 410 aaPredicted RBP28.76■■■□□ 2.19
NDEL1-207ENST00000580012 SF3B3Q15393 1217 aaKnown RBP28.76■■■□□ 2.19
NDEL1-207ENST00000580012 STYK1Q6J9G0 422 aa28.76■■■□□ 2.19
NDEL1-207ENST00000580012 MASTLQ96GX5 879 aa28.76■■■□□ 2.19
NDEL1-207ENST00000580012 UBE3BQ7Z3V4 1068 aa28.75■■■□□ 2.19
NDEL1-207ENST00000580012 PLA2G12BQ9BX93 195 aa28.75■■■□□ 2.19
NDEL1-207ENST00000580012 USP44Q9H0E7 712 aa28.75■■■□□ 2.19
NDEL1-207ENST00000580012 PIM2Q9P1W9 311 aa28.75■■■□□ 2.19
NDEL1-207ENST00000580012 NPR1P16066 1061 aa28.74■■■□□ 2.19
NDEL1-207ENST00000580012 PDE8AO60658 829 aa28.73■■■□□ 2.19
NDEL1-207ENST00000580012 CLUAP1Q96AJ1 413 aa28.72■■■□□ 2.19
NDEL1-207ENST00000580012 C9orf78Q9NZ63 289 aaPredicted RBP28.72■■■□□ 2.19
NDEL1-207ENST00000580012 ANKRD31Q8N7Z5 1873 aa28.72■■■□□ 2.19
NDEL1-207ENST00000580012 KIAA1551Q9HCM1 1747 aa28.72■■■□□ 2.19
NDEL1-207ENST00000580012 NBPF7P0C2Y1 421 aaPredicted RBP28.71■■■□□ 2.19
NDEL1-207ENST00000580012 DZIP1LQ8IYY4 767 aaKnown RBP28.71■■■□□ 2.19
NDEL1-207ENST00000580012 RLBP1P12271 317 aa28.7■■■□□ 2.18
NDEL1-207ENST00000580012 TTLL6Q8N841 843 aa28.7■■■□□ 2.18
NDEL1-207ENST00000580012 CNKSR1Q969H4 720 aa28.7■■■□□ 2.18
NDEL1-207ENST00000580012 ZNF622Q969S3 477 aaKnown RBP eCLIP28.7■■■□□ 2.18
NDEL1-207ENST00000580012 CRAMP1Q96RY5 1269 aa28.7■■■□□ 2.18
NDEL1-207ENST00000580012 TMEM57Q8N5G2 664 aa28.69■■■□□ 2.18
NDEL1-207ENST00000580012 PLIN1O60240 522 aa28.68■■■□□ 2.18
NDEL1-207ENST00000580012 CSF1RP07333 972 aa28.68■■■□□ 2.18
NDEL1-207ENST00000580012 DALRD3Q5D0E6 543 aaKnown RBP28.68■■■□□ 2.18
NDEL1-207ENST00000580012 TTLL11Q8NHH1 800 aa28.68■■■□□ 2.18
NDEL1-207ENST00000580012 KAZALD1Q96I82 304 aa28.68■■■□□ 2.18
NDEL1-207ENST00000580012 UTRNP46939 3433 aa28.68■■■□□ 2.18
NDEL1-207ENST00000580012 MS4A1P11836 297 aa28.67■■■□□ 2.18
NDEL1-207ENST00000580012 ALDH1B1P30837 517 aa28.67■■■□□ 2.18
NDEL1-207ENST00000580012 FOXO4P98177 505 aa28.67■■■□□ 2.18
NDEL1-207ENST00000580012 RPGRQ92834 1020 aaKnown RBP28.67■■■□□ 2.18
NDEL1-207ENST00000580012 RBM17Q96I25 401 aaKnown RBP28.67■■■□□ 2.18
NDEL1-207ENST00000580012 CTSWP56202 376 aa28.66■■■□□ 2.18
NDEL1-207ENST00000580012 TNRC6CQ9HCJ0 1690 aaKnown RBP28.66■■■□□ 2.18
NDEL1-207ENST00000580012 YBX3P16989 372 aaKnown RBP eCLIP28.65■■■□□ 2.18
NDEL1-207ENST00000580012 EPHA10Q5JZY3 1008 aa28.65■■■□□ 2.18
NDEL1-207ENST00000580012 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.65■■■□□ 2.18
NDEL1-207ENST00000580012 C7orf43Q8WVR3 580 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms