RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 INTS5Q6P9B9 1019 aaKnown RBP9.26□□□□□ -0.93
CASC3-205ENST00000577605 DNAJC10Q8IXB1 793 aa9.26□□□□□ -0.93
CASC3-205ENST00000577605 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
CASC3-205ENST00000577605 CICQ96RK0 1608 aaPredicted RBP9.25□□□□□ -0.93
CASC3-205ENST00000577605 DPYSL4O14531 572 aa9.25□□□□□ -0.93
CASC3-205ENST00000577605 ANP32CO43423 234 aa9.25□□□□□ -0.93
CASC3-205ENST00000577605 ZPR1O75312 459 aa9.25□□□□□ -0.93
CASC3-205ENST00000577605 MCM10Q7L590 875 aa9.25□□□□□ -0.93
CASC3-205ENST00000577605 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
CASC3-205ENST00000577605 ZNF496Q96IT1 587 aaPredicted RBP9.25□□□□□ -0.93
CASC3-205ENST00000577605 SCN11AQ9UI33 1791 aa9.24□□□□□ -0.93
CASC3-205ENST00000577605 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
CASC3-205ENST00000577605 IL6STP40189 918 aaPredicted RBP9.24□□□□□ -0.93
CASC3-205ENST00000577605 RIPK4P57078 832 aa9.24□□□□□ -0.93
CASC3-205ENST00000577605 LSM11P83369 360 aaKnown RBP eCLIP9.24□□□□□ -0.93
CASC3-205ENST00000577605 MMRN1Q13201 1228 aa9.24□□□□□ -0.93
CASC3-205ENST00000577605 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
CASC3-205ENST00000577605 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
CASC3-205ENST00000577605 KCPQ6ZWJ8 1503 aa9.23□□□□□ -0.93
CASC3-205ENST00000577605 GYS1P13807 737 aa9.23□□□□□ -0.93
CASC3-205ENST00000577605 TMPOP42166 694 aaKnown RBP9.23□□□□□ -0.93
CASC3-205ENST00000577605 TGFB2P61812 414 aa9.23□□□□□ -0.93
CASC3-205ENST00000577605 CALD1Q05682 793 aaKnown RBP9.23□□□□□ -0.93
CASC3-205ENST00000577605 MSL1Q68DK7 614 aa9.23□□□□□ -0.93
CASC3-205ENST00000577605 ANKRD13DQ6ZTN6 518 aa9.23□□□□□ -0.93
CASC3-205ENST00000577605 NARFQ9UHQ1 456 aa9.23□□□□□ -0.93
CASC3-205ENST00000577605 PARP3Q9Y6F1 533 aa9.23□□□□□ -0.93
CASC3-205ENST00000577605 GRIN3BO60391 1043 aa9.22□□□□□ -0.93
CASC3-205ENST00000577605 MMP10P09238 476 aa9.22□□□□□ -0.93
CASC3-205ENST00000577605 FOSBP53539 338 aa9.22□□□□□ -0.93
CASC3-205ENST00000577605 EIF5P55010 431 aaKnown RBP9.22□□□□□ -0.93
CASC3-205ENST00000577605 AMIGO3Q86WK7 504 aa9.22□□□□□ -0.93
CASC3-205ENST00000577605 CHMP4AQ9BY43 222 aa9.22□□□□□ -0.93
CASC3-205ENST00000577605 ADAMTS8Q9UP79 889 aa9.22□□□□□ -0.93
CASC3-205ENST00000577605 COL24A1Q17RW2 1714 aa9.22□□□□□ -0.93
CASC3-205ENST00000577605 ARHGAP33O14559 1287 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 CANXP27824 592 aaKnown RBP9.21□□□□□ -0.94
CASC3-205ENST00000577605 TM4SF1P30408 202 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 DCTN1Q14203 1278 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 E2F4Q16254 413 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 GPR162Q16538 588 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 PDZRN3Q9UPQ7 1066 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 ZBTB1Q9Y2K1 713 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 TAF1LQ8IZX4 1826 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 COL15A1P39059 1388 aa9.21□□□□□ -0.94
CASC3-205ENST00000577605 PSEN2P49810 448 aa9.2□□□□□ -0.94
CASC3-205ENST00000577605 USPL1Q5W0Q7 1092 aa9.2□□□□□ -0.94
CASC3-205ENST00000577605 CLEC4GQ6UXB4 293 aa9.2□□□□□ -0.94
CASC3-205ENST00000577605 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
CASC3-205ENST00000577605 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
CASC3-205ENST00000577605 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
CASC3-205ENST00000577605 SEMA3EO15041 775 aa9.19□□□□□ -0.94
CASC3-205ENST00000577605 KCNQ3O43525 872 aa9.19□□□□□ -0.94
CASC3-205ENST00000577605 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
CASC3-205ENST00000577605 EIF4A1P60842 406 aaKnown RBP9.19□□□□□ -0.94
CASC3-205ENST00000577605 NGEFQ8N5V2 710 aa9.19□□□□□ -0.94
CASC3-205ENST00000577605 KCNK17Q96T54 332 aa9.19□□□□□ -0.94
CASC3-205ENST00000577605 TSPYL4Q9UJ04 414 aa9.19□□□□□ -0.94
CASC3-205ENST00000577605 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
CASC3-205ENST00000577605 COL5A3P25940 1745 aaPredicted RBP9.19□□□□□ -0.94
CASC3-205ENST00000577605 CHL1O00533 1208 aa9.18□□□□□ -0.94
CASC3-205ENST00000577605 A1BGP04217 495 aa9.18□□□□□ -0.94
CASC3-205ENST00000577605 HOXB7P09629 217 aa9.18□□□□□ -0.94
CASC3-205ENST00000577605 UBR3Q6ZT12 1888 aa9.18□□□□□ -0.94
CASC3-205ENST00000577605 SMIM5Q71RC9 77 aa9.18□□□□□ -0.94
CASC3-205ENST00000577605 UBR2Q8IWV8 1755 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 TJP1Q07157 1748 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 ERVV-1B6SEH8 477 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 POLRMTO00411 1230 aaKnown RBP9.17□□□□□ -0.94
CASC3-205ENST00000577605 CCDC27Q2M243 656 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 DMRTA1Q5VZB9 504 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
CASC3-205ENST00000577605 CCDC146Q8IYE0 955 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 ARID3AQ99856 593 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 BCL2L12Q9HB09 334 aa9.17□□□□□ -0.94
CASC3-205ENST00000577605 SRP68Q9UHB9 627 aaKnown RBP9.17□□□□□ -0.94
CASC3-205ENST00000577605 SERPINB2P05120 415 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 YY1P25490 414 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 GNAI1P63096 354 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 NFIXQ14938 502 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 NLGN2Q8NFZ4 835 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 ZDHHC16Q969W1 377 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 SETDB2Q96T68 719 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 MRS2Q9HD23 443 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 PCDHGA10Q9Y5H3 936 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
CASC3-205ENST00000577605 C10orf71Q711Q0 1435 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 CARMIL3Q8ND23 1372 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 SIPA1L3O60292 1781 aaPredicted RBP9.15□□□□□ -0.94
CASC3-205ENST00000577605 APAF1O14727 1248 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 CAMTA2O94983 1202 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 PDIA6Q15084 440 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 KIF6Q6ZMV9 814 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 IL27Q8NEV9 243 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 THUMPD2Q9BTF0 503 aaKnown RBP9.15□□□□□ -0.94
CASC3-205ENST00000577605 C1orf115Q9H7X2 142 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms