RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CEMIPQ8WUJ3 1361 aa21.86■■□□□ 1.09
CTDNEP1-211ENST00000575783 CA12O43570 354 aa21.85■■□□□ 1.09
CTDNEP1-211ENST00000575783 NUTM1Q86Y26 1132 aa21.85■■□□□ 1.09
CTDNEP1-211ENST00000575783 PHACTR3Q96KR7 559 aa21.85■■□□□ 1.09
CTDNEP1-211ENST00000575783 CELF2O95319 508 aaKnown RBP21.84■■□□□ 1.09
CTDNEP1-211ENST00000575783 DGKZQ13574 1117 aa21.84■■□□□ 1.09
CTDNEP1-211ENST00000575783 SAPCD2Q86UD0 394 aa21.84■■□□□ 1.09
CTDNEP1-211ENST00000575783 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
CTDNEP1-211ENST00000575783 COL4A5P29400 1685 aa21.83■■□□□ 1.09
CTDNEP1-211ENST00000575783 CRY2Q49AN0 593 aa21.83■■□□□ 1.09
CTDNEP1-211ENST00000575783 NIM1KQ8IY84 436 aa21.83■■□□□ 1.09
CTDNEP1-211ENST00000575783 NGEFQ8N5V2 710 aa21.83■■□□□ 1.09
CTDNEP1-211ENST00000575783 BCORQ6W2J9 1755 aa21.83■■□□□ 1.09
CTDNEP1-211ENST00000575783 TNRC18O15417 2968 aaPredicted RBP21.83■■□□□ 1.08
CTDNEP1-211ENST00000575783 SNED1Q8TER0 1413 aa21.82■■□□□ 1.08
CTDNEP1-211ENST00000575783 RGL2O15211 777 aa21.82■■□□□ 1.08
CTDNEP1-211ENST00000575783 SLC51AQ86UW1 340 aa21.82■■□□□ 1.08
CTDNEP1-211ENST00000575783 NYXQ9GZU5 481 aa21.82■■□□□ 1.08
CTDNEP1-211ENST00000575783 ADARB2Q9NS39 739 aaKnown RBP21.82■■□□□ 1.08
CTDNEP1-211ENST00000575783 LTBP1Q14766 1721 aa21.81■■□□□ 1.08
CTDNEP1-211ENST00000575783 PRKAR2BP31323 418 aa21.81■■□□□ 1.08
CTDNEP1-211ENST00000575783 MCM10Q7L590 875 aa21.81■■□□□ 1.08
CTDNEP1-211ENST00000575783 GLIS2Q9BZE0 524 aaPredicted RBP21.81■■□□□ 1.08
CTDNEP1-211ENST00000575783 ZNF408Q9H9D4 720 aa21.81■■□□□ 1.08
CTDNEP1-211ENST00000575783 ABCC12Q96J65 1359 aa21.81■■□□□ 1.08
CTDNEP1-211ENST00000575783 THSD7BQ9C0I4 1608 aa21.8■■□□□ 1.08
CTDNEP1-211ENST00000575783 BRPF1P55201 1214 aaPredicted RBP21.8■■□□□ 1.08
CTDNEP1-211ENST00000575783 GRIPAP1Q4V328 841 aa21.8■■□□□ 1.08
CTDNEP1-211ENST00000575783 CIAPIN1Q6FI81 312 aa21.8■■□□□ 1.08
CTDNEP1-211ENST00000575783 RTF1Q92541 710 aaKnown RBP21.8■■□□□ 1.08
CTDNEP1-211ENST00000575783 GPRC5DQ9NZD1 345 aa21.8■■□□□ 1.08
CTDNEP1-211ENST00000575783 PPIP5K2O43314 1243 aa21.79■■□□□ 1.08
CTDNEP1-211ENST00000575783 RBM17Q96I25 401 aaKnown RBP21.79■■□□□ 1.08
CTDNEP1-211ENST00000575783 PPEF1O14829 653 aaPredicted RBP21.78■■□□□ 1.08
CTDNEP1-211ENST00000575783 PER1O15534 1290 aaPredicted RBP21.78■■□□□ 1.08
CTDNEP1-211ENST00000575783 HOXA10P31260 410 aaPredicted RBP21.78■■□□□ 1.08
CTDNEP1-211ENST00000575783 AOC3Q16853 763 aa21.78■■□□□ 1.08
CTDNEP1-211ENST00000575783 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
CTDNEP1-211ENST00000575783 SIPA1L3O60292 1781 aaPredicted RBP21.78■■□□□ 1.08
CTDNEP1-211ENST00000575783 GPTP24298 496 aa21.77■■□□□ 1.08
CTDNEP1-211ENST00000575783 GMPSP49915 693 aaPredicted RBP21.76■■□□□ 1.07
CTDNEP1-211ENST00000575783 CXCL9Q07325 125 aa21.76■■□□□ 1.07
CTDNEP1-211ENST00000575783 TRIM26Q12899 539 aaPredicted RBP21.76■■□□□ 1.07
CTDNEP1-211ENST00000575783 DCTN1Q14203 1278 aa21.76■■□□□ 1.07
CTDNEP1-211ENST00000575783 HHIPL1Q96JK4 782 aa21.76■■□□□ 1.07
CTDNEP1-211ENST00000575783 TMX4Q9H1E5 349 aaPredicted RBP21.76■■□□□ 1.07
CTDNEP1-211ENST00000575783 CRAMP1Q96RY5 1269 aa21.75■■□□□ 1.07
CTDNEP1-211ENST00000575783 ZIC5Q96T25 663 aa21.75■■□□□ 1.07
CTDNEP1-211ENST00000575783 RSPH6AQ9H0K4 717 aa21.75■■□□□ 1.07
CTDNEP1-211ENST00000575783 COL3A1P02461 1466 aaPredicted RBP21.75■■□□□ 1.07
CTDNEP1-211ENST00000575783 KIF7Q2M1P5 1343 aa21.75■■□□□ 1.07
CTDNEP1-211ENST00000575783 NPC1L1Q9UHC9 1359 aa21.74■■□□□ 1.07
CTDNEP1-211ENST00000575783 MIS18AQ9NYP9 233 aa21.74■■□□□ 1.07
CTDNEP1-211ENST00000575783 ZNRF3Q9ULT6 936 aa21.74■■□□□ 1.07
CTDNEP1-211ENST00000575783 ERVV-1B6SEH8 477 aa21.73■■□□□ 1.07
CTDNEP1-211ENST00000575783 SUSD4Q5VX71 490 aa21.73■■□□□ 1.07
CTDNEP1-211ENST00000575783 BCL2L13Q9BXK5 485 aa21.73■■□□□ 1.07
CTDNEP1-211ENST00000575783 RRP7AQ9Y3A4 280 aaKnown RBP21.73■■□□□ 1.07
CTDNEP1-211ENST00000575783 NOGQ13253 232 aa21.72■■□□□ 1.07
CTDNEP1-211ENST00000575783 KIF6Q6ZMV9 814 aa21.72■■□□□ 1.07
CTDNEP1-211ENST00000575783 TTLL7Q6ZT98 887 aa21.72■■□□□ 1.07
CTDNEP1-211ENST00000575783 C3orf67Q6ZVT6 689 aa21.72■■□□□ 1.07
CTDNEP1-211ENST00000575783 CDC37L1Q7L3B6 337 aa21.72■■□□□ 1.07
CTDNEP1-211ENST00000575783 PGAP2Q9UHJ9 254 aa21.72■■□□□ 1.07
CTDNEP1-211ENST00000575783 MAP3K15Q6ZN16 1313 aa21.72■■□□□ 1.07
CTDNEP1-211ENST00000575783 HIRAP54198 1017 aaPredicted RBP21.71■■□□□ 1.07
CTDNEP1-211ENST00000575783 SOX10P56693 466 aa21.71■■□□□ 1.07
CTDNEP1-211ENST00000575783 ZBTB3Q9H5J0 574 aa21.71■■□□□ 1.07
CTDNEP1-211ENST00000575783 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
CTDNEP1-211ENST00000575783 CASP8AP2Q9UKL3 1982 aa21.7■■□□□ 1.07
CTDNEP1-211ENST00000575783 RAD17O75943 681 aa21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 MYL6BP14649 208 aa21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 HUNKP57058 714 aa21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 TAF7Q15545 349 aaPredicted RBP21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 ZC3H15Q8WU90 426 aaKnown RBP21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 VPS33BQ9H267 617 aa21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 ATP6V0A2Q9Y487 856 aa21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 UBN2Q6ZU65 1347 aa21.7■■□□□ 1.06
CTDNEP1-211ENST00000575783 TRPM7Q96QT4 1865 aa21.69■■□□□ 1.06
CTDNEP1-211ENST00000575783 DLK2Q6UY11 383 aa21.69■■□□□ 1.06
CTDNEP1-211ENST00000575783 USP48Q86UV5 1035 aa21.69■■□□□ 1.06
CTDNEP1-211ENST00000575783 SUPT20HQ8NEM7 779 aa21.69■■□□□ 1.06
CTDNEP1-211ENST00000575783 TRPM4Q8TD43 1214 aa21.69■■□□□ 1.06
CTDNEP1-211ENST00000575783 CFAP53Q96M91 514 aa21.69■■□□□ 1.06
CTDNEP1-211ENST00000575783 U2AF1L5P0DN76 240 aaPredicted RBP21.68■■□□□ 1.06
CTDNEP1-211ENST00000575783 U2AF1Q01081 240 aaKnown RBP eCLIP21.68■■□□□ 1.06
CTDNEP1-211ENST00000575783 NLRP3Q96P20 1036 aa21.68■■□□□ 1.06
CTDNEP1-211ENST00000575783 NUDCQ9Y266 331 aa21.68■■□□□ 1.06
CTDNEP1-211ENST00000575783 RIC1Q4ADV7 1423 aa21.67■■□□□ 1.06
CTDNEP1-211ENST00000575783 TNIP1Q15025 636 aa21.67■■□□□ 1.06
CTDNEP1-211ENST00000575783 DPP8Q6V1X1 898 aaPredicted RBP21.67■■□□□ 1.06
CTDNEP1-211ENST00000575783 CNOT7Q9UIV1 285 aaKnown RBP21.67■■□□□ 1.06
CTDNEP1-211ENST00000575783 SHTN1A0MZ66 631 aa21.66■■□□□ 1.06
CTDNEP1-211ENST00000575783 NTSR2O95665 410 aa21.66■■□□□ 1.06
CTDNEP1-211ENST00000575783 ZNF34Q8IZ26 560 aa21.66■■□□□ 1.06
CTDNEP1-211ENST00000575783 H7C1D1 291 aa21.65■■□□□ 1.06
CTDNEP1-211ENST00000575783 HTATSF1O43719 755 aaKnown RBP21.65■■□□□ 1.06
CTDNEP1-211ENST00000575783 PPP1R42Q7Z4L9 355 aa21.65■■□□□ 1.06
CTDNEP1-211ENST00000575783 RTFDC1Q9BY42 306 aaPredicted RBP21.65■■□□□ 1.06
CTDNEP1-211ENST00000575783 IBTKQ9P2D0 1353 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms