RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SUSD3Q96L08 255 aa7.35□□□□□ -1.23
HDGFL3-202ENST00000562702 USP17L5A8MUK1 530 aa7.34□□□□□ -1.23
HDGFL3-202ENST00000562702 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
HDGFL3-202ENST00000562702 FMR1NBQ8N0W7 255 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-202ENST00000562702 DTWD1Q8N5C7 304 aa7.34□□□□□ -1.23
HDGFL3-202ENST00000562702 TPCN2Q8NHX9 752 aa7.34□□□□□ -1.23
HDGFL3-202ENST00000562702 GOLGA2P5Q9HBQ8 144 aa7.34□□□□□ -1.23
HDGFL3-202ENST00000562702 SH3PXD2AQ5TCZ1 1133 aa7.33□□□□□ -1.24
HDGFL3-202ENST00000562702 CCDC102BQ68D86 513 aa7.33□□□□□ -1.24
HDGFL3-202ENST00000562702 DMRTC2Q8IXT2 367 aaPredicted RBP7.33□□□□□ -1.24
HDGFL3-202ENST00000562702 RNF112Q9ULX5 631 aa7.33□□□□□ -1.24
HDGFL3-202ENST00000562702 PPP1R12BO60237 982 aaPredicted RBP7.32□□□□□ -1.24
HDGFL3-202ENST00000562702 AFF1P51825 1210 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-202ENST00000562702 BTLAQ7Z6A9 289 aa7.32□□□□□ -1.24
HDGFL3-202ENST00000562702 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
HDGFL3-202ENST00000562702 TSPAN10Q9H1Z9 355 aaPredicted RBP7.32□□□□□ -1.24
HDGFL3-202ENST00000562702 DNAJB12Q9NXW2 375 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-202ENST00000562702 M0R2N6 131 aa7.31□□□□□ -1.24
HDGFL3-202ENST00000562702 SLC51AQ86UW1 340 aa7.31□□□□□ -1.24
HDGFL3-202ENST00000562702 ZNF280CQ8ND82 737 aa7.31□□□□□ -1.24
HDGFL3-202ENST00000562702 ALG2Q9H553 416 aa7.31□□□□□ -1.24
HDGFL3-202ENST00000562702 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.31□□□□□ -1.24
HDGFL3-202ENST00000562702 PAX4O43316 350 aa7.3□□□□□ -1.24
HDGFL3-202ENST00000562702 EPB42P16452 691 aa7.3□□□□□ -1.24
HDGFL3-202ENST00000562702 CCINQ13939 588 aa7.3□□□□□ -1.24
HDGFL3-202ENST00000562702 WFDC12Q8WWY7 111 aa7.3□□□□□ -1.24
HDGFL3-202ENST00000562702 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-202ENST00000562702 PCMTD2Q9NV79 361 aa7.3□□□□□ -1.24
HDGFL3-202ENST00000562702 MSL1Q68DK7 614 aa7.29□□□□□ -1.24
HDGFL3-202ENST00000562702 POTEAQ6S8J7 498 aa7.29□□□□□ -1.24
HDGFL3-202ENST00000562702 FAM35AQ86V20 835 aa7.29□□□□□ -1.24
HDGFL3-202ENST00000562702 ALDH16A1Q8IZ83 802 aa7.29□□□□□ -1.24
HDGFL3-202ENST00000562702 LARGE2Q8N3Y3 721 aa7.29□□□□□ -1.24
HDGFL3-202ENST00000562702 PALM3A6NDB9 673 aaPredicted RBP7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 ARID4AP29374 1257 aaPredicted RBP7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 IREB2P48200 963 aaKnown RBP7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 MCTP1Q6DN14 999 aa7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 IGF2-ASQ6U949 168 aa7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 FBXO11Q86XK2 927 aa7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 WFDC8Q8IUA0 241 aa7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 GAS2L2Q8NHY3 880 aa7.28□□□□□ -1.24
HDGFL3-202ENST00000562702 NFKB1P19838 968 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 TXKP42681 527 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 MCM6Q14566 821 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 IER5Q5VY09 327 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 PLEKHM2Q8IWE5 1019 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 GSX2Q9BZM3 304 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 FRRS1LQ9P0K9 344 aa7.27□□□□□ -1.25
HDGFL3-202ENST00000562702 ZBTB7BO15156 539 aaPredicted RBP7.26□□□□□ -1.25
HDGFL3-202ENST00000562702 CPB1P15086 417 aa7.26□□□□□ -1.25
HDGFL3-202ENST00000562702 ELMSAN1Q6PJG2 1045 aa7.26□□□□□ -1.25
HDGFL3-202ENST00000562702 OGFOD1Q8N543 542 aa7.26□□□□□ -1.25
HDGFL3-202ENST00000562702 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
HDGFL3-202ENST00000562702 ATAD2Q6PL18 1390 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 USP17L3A6NCW0 530 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 USP17L4A6NCW7 530 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 RAD21O60216 631 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 USP17L2Q6R6M4 530 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 PRR23CQ6ZRP0 262 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 USP17L1Q7RTZ2 530 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 NGLY1Q96IV0 654 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 NAGPAQ9UK23 515 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 COG6Q9Y2V7 657 aa7.25□□□□□ -1.25
HDGFL3-202ENST00000562702 TGFBR3LH3BV60 316 aa7.24□□□□□ -1.25
HDGFL3-202ENST00000562702 MAP3K6O95382 1288 aa7.24□□□□□ -1.25
HDGFL3-202ENST00000562702 NOS3P29474 1203 aa7.24□□□□□ -1.25
HDGFL3-202ENST00000562702 CLDN10P78369 228 aa7.24□□□□□ -1.25
HDGFL3-202ENST00000562702 TSEN2Q8NCE0 465 aaKnown RBP7.24□□□□□ -1.25
HDGFL3-202ENST00000562702 CHMP7Q8WUX9 453 aaPredicted RBP7.24□□□□□ -1.25
HDGFL3-202ENST00000562702 KIAA1024Q9UPX6 916 aa7.24□□□□□ -1.25
HDGFL3-202ENST00000562702 PTCD1O75127 700 aaKnown RBP7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 RTN1Q16799 776 aa7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 TPRNQ4KMQ1 711 aa7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 SIX5Q8N196 739 aa7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 TTC9Q92623 222 aa7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 C2orf49Q9BVC5 232 aaPredicted RBP7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 COL17A1Q9UMD9 1497 aaPredicted RBP7.23□□□□□ -1.25
HDGFL3-202ENST00000562702 IRAK1P51617 712 aa7.22□□□□□ -1.25
HDGFL3-202ENST00000562702 ILDR2Q71H61 639 aa7.22□□□□□ -1.25
HDGFL3-202ENST00000562702 SCG3Q8WXD2 468 aaKnown RBP7.22□□□□□ -1.25
HDGFL3-202ENST00000562702 LPIN3Q9BQK8 851 aa7.22□□□□□ -1.25
HDGFL3-202ENST00000562702 AKTIPQ9H8T0 292 aa7.22□□□□□ -1.25
HDGFL3-202ENST00000562702 C11orf16Q9NQ32 467 aa7.22□□□□□ -1.25
HDGFL3-202ENST00000562702 GSC2O15499 205 aa7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 ATP9BO43861 1147 aa7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 YBX3P16989 372 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 FSTP19883 344 aa7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 DHX32Q7L7V1 743 aaKnown RBP7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 ZNF594Q96JF6 807 aaPredicted RBP7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.26
HDGFL3-202ENST00000562702 COBLO75128 1261 aa7.2□□□□□ -1.26
HDGFL3-202ENST00000562702 PERM1Q5SV97 790 aa7.2□□□□□ -1.26
HDGFL3-202ENST00000562702 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
HDGFL3-202ENST00000562702 TRPM4Q8TD43 1214 aa7.2□□□□□ -1.26
HDGFL3-202ENST00000562702 SRA1Q9HD15 236 aaKnown RBP7.2□□□□□ -1.26
HDGFL3-202ENST00000562702 C21orf2O43822 256 aa7.19□□□□□ -1.26
HDGFL3-202ENST00000562702 RARAP10276 462 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms