RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MAGI2Q86UL8 1455 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 TTC37Q6PGP7 1564 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 TDRD9Q8NDG6 1382 aaKnown RBP7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.22
SNRPA1-209ENST00000560307 YEATS2Q9ULM3 1422 aa7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L5A8MUK1 530 aa7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 DXOO77932 396 aaKnown RBP7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 SKAP1Q86WV1 359 aa7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 TESK2Q96S53 571 aa7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 PPP1R9BQ96SB3 815 aa7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 SPOCK3Q9BQ16 436 aa7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 PREX2Q70Z35 1606 aa7.45□□□□□ -1.22
SNRPA1-209ENST00000560307 CEP152O94986 1710 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 PPP2R1AP30153 589 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 PLA2G4EQ3MJ16 856 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 SLFNL1Q499Z3 407 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 LARP1Q6PKG0 1096 aaKnown RBP7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 GPR161Q8N6U8 529 aaKnown RBP7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 SNX21Q969T3 373 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 CFDP1Q9UEE9 299 aaPredicted RBP7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 USP32Q8NFA0 1604 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 KANK1Q14678 1352 aa7.44□□□□□ -1.22
SNRPA1-209ENST00000560307 ABCA8O94911 1581 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 K7ELQ4 463 aaPredicted RBP7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 OFD1O75665 1012 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 DDIT3P35638 169 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 NNTQ13423 1086 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 C6orf118Q5T5N4 469 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 SMAP1Q8IYB5 467 aaPredicted RBP7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 WHAMMQ8TF30 809 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 GBP4Q96PP9 640 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 SLKQ9H2G2 1235 aaPredicted RBP7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 PANK3Q9H999 370 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 MKRN1Q9UHC7 482 aaKnown RBP7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 PCDHB9Q9Y5E1 797 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 ZNF644Q9H582 1327 aaPredicted RBP7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
SNRPA1-209ENST00000560307 MYO3AQ8NEV4 1616 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 SHPRHQ149N8 1683 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 IGHDP01880 384 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 RASA1P20936 1047 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 WDR4P57081 412 aaKnown RBP7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 CNGB1Q14028 1251 aaPredicted RBP7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 ELOAQ14241 798 aaKnown RBP7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 ZSCAN30Q86W11 494 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 HSCBQ8IWL3 235 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 NFATC2IPQ8NCF5 419 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 FAM174AQ8TBP5 190 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 PANK2Q9BZ23 570 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 TLL2Q9Y6L7 1015 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 PRG4Q92954 1404 aaPredicted RBP7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 ADGRL1O94910 1474 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 IFT140Q96RY7 1462 aa7.42□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L15C9J2P7 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L10C9JJH3 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L13C9JLJ4 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L11C9JVI0 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L21D6R901 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L18D6R9N7 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L22D6RA61 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L17D6RBQ6 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L19D6RCP7 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L20D6RJB6 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 JUNDP17535 347 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 USP17L24Q0WX57 530 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 NCOA4Q13772 614 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 CLEC17AQ6ZS10 378 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 RNF135Q8IUD6 432 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 SMC5Q8IY18 1101 aa7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 RWDD1Q9H446 243 aaPredicted RBP7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 SCAF11Q99590 1463 aaKnown RBP7.41□□□□□ -1.22
SNRPA1-209ENST00000560307 ARHGEF15O94989 841 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 F12P00748 615 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 MCM5P33992 734 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 PTK2Q05397 1052 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 PTPRNQ16849 979 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 CRTC2Q53ET0 693 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 CC2D1BQ5T0F9 858 aaKnown RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 UTP14CQ5TAP6 766 aaKnown RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 KIAA1211Q6ZU35 1233 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 PLEKHM2Q8IWE5 1019 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 FAM200AQ8TCP9 573 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 ANP32BQ92688 251 aaKnown RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 PRDM4Q9UKN5 801 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 GNEQ9Y223 722 aaKnown RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 KNSTRNQ9Y448 316 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 ZC3H4Q9UPT8 1303 aaKnown RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 POLR3AO14802 1390 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 PLA2R1Q13018 1463 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 SAMD9LQ8IVG5 1584 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 CFAP74Q9C0B2 1584 aa7.4□□□□□ -1.22
SNRPA1-209ENST00000560307 CLTCL1P53675 1640 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 ADGRB2O60241 1585 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 MAGI1Q96QZ7 1491 aaPredicted RBP7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 KIF16BQ96L93 1317 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 SENP3-EIF4A1A0A087X0R7 540 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 324.4 ms