RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 IL16Q14005 1332 aa19.17■□□□□ 0.66
RPL28-208ENST00000559463 TCIRG1Q13488 830 aa19.16■□□□□ 0.66
RPL28-208ENST00000559463 CRY2Q49AN0 593 aa19.16■□□□□ 0.66
RPL28-208ENST00000559463 PLBD2Q8NHP8 589 aa19.16■□□□□ 0.66
RPL28-208ENST00000559463 SALL2Q9Y467 1007 aaPredicted RBP19.16■□□□□ 0.66
RPL28-208ENST00000559463 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
RPL28-208ENST00000559463 PPP1R42Q7Z4L9 355 aa19.15■□□□□ 0.66
RPL28-208ENST00000559463 NLRP10Q86W26 655 aa19.15■□□□□ 0.66
RPL28-208ENST00000559463 ANKRD13DQ6ZTN6 518 aa19.14■□□□□ 0.65
RPL28-208ENST00000559463 C3orf67Q6ZVT6 689 aa19.14■□□□□ 0.65
RPL28-208ENST00000559463 C7orf43Q8WVR3 580 aa19.14■□□□□ 0.65
RPL28-208ENST00000559463 UTP14AQ9BVJ6 771 aaKnown RBP19.14■□□□□ 0.65
RPL28-208ENST00000559463 PHAXQ9H814 394 aaKnown RBP19.14■□□□□ 0.65
RPL28-208ENST00000559463 FANCIQ9NVI1 1328 aa19.14■□□□□ 0.65
RPL28-208ENST00000559463 LMNB1P20700 586 aa19.13■□□□□ 0.65
RPL28-208ENST00000559463 WDR63Q8IWG1 891 aa19.13■□□□□ 0.65
RPL28-208ENST00000559463 RNF123Q5XPI4 1314 aa19.12■□□□□ 0.65
RPL28-208ENST00000559463 SNED1Q8TER0 1413 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 LTBP3Q9NS15 1303 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 SLC10A5Q5PT55 438 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 OLFM4Q6UX06 510 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 SYNE4Q8N205 404 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 ZNF428Q96B54 188 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 ISCA1Q9BUE6 129 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 MYH3P11055 1940 aa19.11■□□□□ 0.65
RPL28-208ENST00000559463 CEP350Q5VT06 3117 aa19.1■□□□□ 0.65
RPL28-208ENST00000559463 ZC3H4Q9UPT8 1303 aaKnown RBP19.1■□□□□ 0.65
RPL28-208ENST00000559463 ATP5J2-PTCD1G3V325 749 aa19.1■□□□□ 0.65
RPL28-208ENST00000559463 C1QTNF8P60827 252 aa19.1■□□□□ 0.65
RPL28-208ENST00000559463 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
RPL28-208ENST00000559463 SOGA3Q5TF21 947 aa19.1■□□□□ 0.65
RPL28-208ENST00000559463 TAOK3Q9H2K8 898 aa19.1■□□□□ 0.65
RPL28-208ENST00000559463 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
RPL28-208ENST00000559463 KIF3CO14782 793 aa19.09■□□□□ 0.65
RPL28-208ENST00000559463 ALDH1B1P30837 517 aa19.09■□□□□ 0.65
RPL28-208ENST00000559463 HOXA10P31260 410 aaPredicted RBP19.09■□□□□ 0.65
RPL28-208ENST00000559463 GOLGA2Q08379 1002 aa19.09■□□□□ 0.65
RPL28-208ENST00000559463 RPGRQ92834 1020 aaKnown RBP19.09■□□□□ 0.65
RPL28-208ENST00000559463 TRMT112Q9UI30 125 aaKnown RBP19.09■□□□□ 0.65
RPL28-208ENST00000559463 SH3TC1Q8TE82 1336 aa19.08■□□□□ 0.65
RPL28-208ENST00000559463 HCLS1P14317 486 aaPredicted RBP19.08■□□□□ 0.64
RPL28-208ENST00000559463 CCDC93Q567U6 631 aa19.08■□□□□ 0.64
RPL28-208ENST00000559463 SLC51AQ86UW1 340 aa19.08■□□□□ 0.64
RPL28-208ENST00000559463 LRRC37AA6NMS7 1700 aa19.08■□□□□ 0.64
RPL28-208ENST00000559463 ZNF521Q96K83 1311 aa19.07■□□□□ 0.64
RPL28-208ENST00000559463 TCERG1O14776 1098 aaKnown RBP19.07■□□□□ 0.64
RPL28-208ENST00000559463 RIC3Q7Z5B4 369 aa19.07■□□□□ 0.64
RPL28-208ENST00000559463 RBM17Q96I25 401 aaKnown RBP19.07■□□□□ 0.64
RPL28-208ENST00000559463 NLRP3Q96P20 1036 aa19.07■□□□□ 0.64
RPL28-208ENST00000559463 CHMP4AQ9BY43 222 aa19.07■□□□□ 0.64
RPL28-208ENST00000559463 NMRK2Q9NPI5 230 aa19.07■□□□□ 0.64
RPL28-208ENST00000559463 WDR90Q96KV7 1748 aa19.07■□□□□ 0.64
RPL28-208ENST00000559463 COL4A1P02462 1669 aa19.07■□□□□ 0.64
RPL28-208ENST00000559463 TRIM28Q13263 835 aaKnown RBP19.06■□□□□ 0.64
RPL28-208ENST00000559463 CRAMP1Q96RY5 1269 aa19.06■□□□□ 0.64
RPL28-208ENST00000559463 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
RPL28-208ENST00000559463 STK31Q9BXU1 1019 aa19.05■□□□□ 0.64
RPL28-208ENST00000559463 ABCC4O15439 1325 aa19.04■□□□□ 0.64
RPL28-208ENST00000559463 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
RPL28-208ENST00000559463 FKBP4Q02790 459 aaKnown RBP eCLIP19.04■□□□□ 0.64
RPL28-208ENST00000559463 G2E3Q7L622 706 aa19.04■□□□□ 0.64
RPL28-208ENST00000559463 FAM89AQ96GI7 184 aa19.04■□□□□ 0.64
RPL28-208ENST00000559463 MYD88Q99836 296 aa19.04■□□□□ 0.64
RPL28-208ENST00000559463 COL4A5P29400 1685 aa19.04■□□□□ 0.64
RPL28-208ENST00000559463 SPEF2Q9C093 1822 aa19.03■□□□□ 0.64
RPL28-208ENST00000559463 PPEF1O14829 653 aaPredicted RBP19.03■□□□□ 0.64
RPL28-208ENST00000559463 VAMP4O75379 141 aa19.03■□□□□ 0.64
RPL28-208ENST00000559463 DDX58O95786 925 aaKnown RBP19.03■□□□□ 0.64
RPL28-208ENST00000559463 RTKN2Q8IZC4 609 aa19.03■□□□□ 0.64
RPL28-208ENST00000559463 GLTPD2A6NH11 291 aa19.02■□□□□ 0.64
RPL28-208ENST00000559463 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
RPL28-208ENST00000559463 METTL22Q9BUU2 404 aaPredicted RBP19.02■□□□□ 0.64
RPL28-208ENST00000559463 ZNF277Q9NRM2 450 aaPredicted RBP19.02■□□□□ 0.64
RPL28-208ENST00000559463 MAP3K2Q9Y2U5 619 aa19.02■□□□□ 0.64
RPL28-208ENST00000559463 LTBP1Q14766 1721 aa19.01■□□□□ 0.63
RPL28-208ENST00000559463 PI4KAP2A4QPH2 592 aa19.01■□□□□ 0.63
RPL28-208ENST00000559463 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
RPL28-208ENST00000559463 RTL5Q5HYW3 569 aaPredicted RBP19.01■□□□□ 0.63
RPL28-208ENST00000559463 KSR2Q6VAB6 950 aa19.01■□□□□ 0.63
RPL28-208ENST00000559463 PI4KAP1Q8N8J0 262 aa19.01■□□□□ 0.63
RPL28-208ENST00000559463 MYH16Q9H6N6 1097 aa19.01■□□□□ 0.63
RPL28-208ENST00000559463 SCN4AP35499 1836 aa19.01■□□□□ 0.63
RPL28-208ENST00000559463 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
RPL28-208ENST00000559463 ZBTB38Q8NAP3 1195 aaPredicted RBP19■□□□□ 0.63
RPL28-208ENST00000559463 CCDC191Q8NCU4 936 aa19■□□□□ 0.63
RPL28-208ENST00000559463 PSMD1Q99460 953 aa19■□□□□ 0.63
RPL28-208ENST00000559463 DUOX1Q9NRD9 1551 aa18.99■□□□□ 0.63
RPL28-208ENST00000559463 IRS4O14654 1257 aaPredicted RBP18.99■□□□□ 0.63
RPL28-208ENST00000559463 IGKV5-2P06315 115 aa18.99■□□□□ 0.63
RPL28-208ENST00000559463 FLIIQ13045 1269 aa18.99■□□□□ 0.63
RPL28-208ENST00000559463 RRAGCQ9HB90 399 aa18.99■□□□□ 0.63
RPL28-208ENST00000559463 CWC25Q9NXE8 425 aaPredicted RBP18.99■□□□□ 0.63
RPL28-208ENST00000559463 ATP6V0A2Q9Y487 856 aa18.99■□□□□ 0.63
RPL28-208ENST00000559463 SF3B3Q15393 1217 aaKnown RBP18.98■□□□□ 0.63
RPL28-208ENST00000559463 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
RPL28-208ENST00000559463 PCCAP05165 728 aaPredicted RBP18.97■□□□□ 0.63
RPL28-208ENST00000559463 IARSP41252 1262 aaKnown RBP18.97■□□□□ 0.63
RPL28-208ENST00000559463 GRAPQ13588 217 aa18.97■□□□□ 0.63
RPL28-208ENST00000559463 GRAPLQ8TC17 118 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 548.7 ms