RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ZNF34Q8IZ26 560 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 NGEFQ8N5V2 710 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 TAF1DQ9H5J8 278 aaPredicted RBP7.69□□□□□ -1.18
USP3-212ENST00000559276 CREBZFQ9NS37 354 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 MAP3K15Q6ZN16 1313 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 NPHP1O15259 732 aa7.68□□□□□ -1.18
USP3-212ENST00000559276 HOXA10P31260 410 aaPredicted RBP7.68□□□□□ -1.18
USP3-212ENST00000559276 PROSER3Q2NL68 480 aa7.68□□□□□ -1.18
USP3-212ENST00000559276 SYNE4Q8N205 404 aa7.68□□□□□ -1.18
USP3-212ENST00000559276 RRP7AQ9Y3A4 280 aaKnown RBP7.68□□□□□ -1.18
USP3-212ENST00000559276 ANKRD36CQ5JPF3 1778 aa7.68□□□□□ -1.18
USP3-212ENST00000559276 IBTKQ9P2D0 1353 aaPredicted RBP7.68□□□□□ -1.18
USP3-212ENST00000559276 NTSR2O95665 410 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 MYL6BP14649 208 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 GPTP24298 496 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 ALDH1B1P30837 517 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 IARSP41252 1262 aaKnown RBP7.67□□□□□ -1.18
USP3-212ENST00000559276 LDHDQ86WU2 507 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 RTKN2Q8IZC4 609 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 PNISRQ8TF01 805 aaKnown RBP7.67□□□□□ -1.18
USP3-212ENST00000559276 PSMD1Q99460 953 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 ZBTB3Q9H5J0 574 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 MKRN1Q9UHC7 482 aaKnown RBP7.67□□□□□ -1.18
USP3-212ENST00000559276 CNTNAP1P78357 1384 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 COL4A1P02462 1669 aa7.67□□□□□ -1.18
USP3-212ENST00000559276 TAF1P21675 1872 aa7.66□□□□□ -1.18
USP3-212ENST00000559276 IQCA1LA6NCM1 817 aa7.66□□□□□ -1.18
USP3-212ENST00000559276 ANXA1P04083 346 aa7.66□□□□□ -1.18
USP3-212ENST00000559276 GIGYF2Q6Y7W6 1299 aaKnown RBP7.66□□□□□ -1.18
USP3-212ENST00000559276 BCL11AQ9H165 835 aa7.66□□□□□ -1.18
USP3-212ENST00000559276 RNF123Q5XPI4 1314 aa7.66□□□□□ -1.18
USP3-212ENST00000559276 EPHX2P34913 555 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 SCNN1DP51172 638 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 FMR1Q06787 632 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP3-212ENST00000559276 ERBB4Q15303 1308 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 KRT24Q2M2I5 525 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 SLC10A5Q5PT55 438 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 MAP1SQ66K74 1059 aaPredicted RBP7.65□□□□□ -1.18
USP3-212ENST00000559276 DDX60Q8IY21 1712 aaKnown RBP7.65□□□□□ -1.18
USP3-212ENST00000559276 TNS4Q8IZW8 715 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 GPC2Q8N158 579 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 CRAMP1Q96RY5 1269 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 NYXQ9GZU5 481 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 HACL1Q9UJ83 578 aa7.65□□□□□ -1.18
USP3-212ENST00000559276 LRRC37AA6NMS7 1700 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 THSD7BQ9C0I4 1608 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 DUOX1Q9NRD9 1551 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 FOXN1O15353 648 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 GTF2E1P29083 439 aaPredicted RBP7.64□□□□□ -1.19
USP3-212ENST00000559276 TMPOP42166 694 aaKnown RBP7.64□□□□□ -1.19
USP3-212ENST00000559276 EPS15P42566 896 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 VEGFBP49765 207 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 RIPK4P57078 832 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 EAPPQ56P03 285 aaPredicted RBP7.64□□□□□ -1.19
USP3-212ENST00000559276 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 KIF6Q6ZMV9 814 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 PPP4R2Q9NY27 417 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 TSPYL4Q9UJ04 414 aa7.64□□□□□ -1.19
USP3-212ENST00000559276 ABCC4O15439 1325 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 ZBED9Q6R2W3 1325 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 MAPK8IP3Q9UPT6 1336 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 RASSF10A6NK89 507 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 CHL1O00533 1208 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 TCERG1O14776 1098 aaKnown RBP7.63□□□□□ -1.19
USP3-212ENST00000559276 PPEF1O14829 653 aaPredicted RBP7.63□□□□□ -1.19
USP3-212ENST00000559276 CAPN15O75808 1086 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 CNTROBQ8N137 903 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 RPGRQ92834 1020 aaKnown RBP7.63□□□□□ -1.19
USP3-212ENST00000559276 BABAM1Q9NWV8 329 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 TAOK2Q9UL54 1235 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 TRIM35Q9UPQ4 493 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 ATP6V0A2Q9Y487 856 aa7.63□□□□□ -1.19
USP3-212ENST00000559276 TRPM7Q96QT4 1865 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 NEFMP07197 916 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 EIF2S2P20042 333 aaKnown RBP7.62□□□□□ -1.19
USP3-212ENST00000559276 PARP10Q53GL7 1025 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 CST9Q5W186 159 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 COPS6Q7L5N1 327 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 PNMA8AQ86V59 439 aaPredicted RBP7.62□□□□□ -1.19
USP3-212ENST00000559276 NLRP10Q86W26 655 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 CCDC146Q8IYE0 955 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 JDP2Q8WYK2 163 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 NECTIN2Q92692 538 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 RBM17Q96I25 401 aaKnown RBP7.62□□□□□ -1.19
USP3-212ENST00000559276 RTFDC1Q9BY42 306 aaPredicted RBP7.62□□□□□ -1.19
USP3-212ENST00000559276 WBP1LQ9NX94 342 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 GJA3Q9Y6H8 435 aa7.62□□□□□ -1.19
USP3-212ENST00000559276 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
USP3-212ENST00000559276 HNRNPUQ00839 825 aaKnown RBP eCLIP7.61□□□□□ -1.19
USP3-212ENST00000559276 CXCL9Q07325 125 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 TCIRG1Q13488 830 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 RALBP1Q15311 655 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 AOC3Q16853 763 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 GRIPAP1Q4V328 841 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 PPP1R42Q7Z4L9 355 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 LARGE2Q8N3Y3 721 aa7.61□□□□□ -1.19
USP3-212ENST00000559276 ZNF428Q96B54 188 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms