RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 MEIS3Q99687 375 aa20.29■□□□□ 0.84
PBX1-215ENST00000559240 ADRA2BP18089 450 aa20.28■□□□□ 0.84
PBX1-215ENST00000559240 TCIRG1Q13488 830 aa20.28■□□□□ 0.84
PBX1-215ENST00000559240 CCDC191Q8NCU4 936 aa20.28■□□□□ 0.84
PBX1-215ENST00000559240 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
PBX1-215ENST00000559240 GNAI2P04899 355 aa20.27■□□□□ 0.84
PBX1-215ENST00000559240 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
PBX1-215ENST00000559240 GCKRQ14397 625 aa20.27■□□□□ 0.83
PBX1-215ENST00000559240 ANKRD44Q8N8A2 993 aa20.27■□□□□ 0.83
PBX1-215ENST00000559240 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
PBX1-215ENST00000559240 MYD88Q99836 296 aa20.26■□□□□ 0.83
PBX1-215ENST00000559240 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
PBX1-215ENST00000559240 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
PBX1-215ENST00000559240 LAMB2P55268 1798 aa20.25■□□□□ 0.83
PBX1-215ENST00000559240 CAMTA2O94983 1202 aa20.25■□□□□ 0.83
PBX1-215ENST00000559240 IPO4Q8TEX9 1081 aaKnown RBP20.25■□□□□ 0.83
PBX1-215ENST00000559240 GRM8O00222 908 aa20.25■□□□□ 0.83
PBX1-215ENST00000559240 PDE4AP27815 886 aa20.25■□□□□ 0.83
PBX1-215ENST00000559240 MTX1Q13505 466 aa20.25■□□□□ 0.83
PBX1-215ENST00000559240 UBTFL1P0CB47 393 aaPredicted RBP20.24■□□□□ 0.83
PBX1-215ENST00000559240 CLCN1P35523 988 aa20.24■□□□□ 0.83
PBX1-215ENST00000559240 TXNRD1Q16881 649 aa20.24■□□□□ 0.83
PBX1-215ENST00000559240 CEP85Q6P2H3 762 aa20.24■□□□□ 0.83
PBX1-215ENST00000559240 PROM2Q8N271 834 aa20.24■□□□□ 0.83
PBX1-215ENST00000559240 CASP7P55210 303 aa20.23■□□□□ 0.83
PBX1-215ENST00000559240 CWF19L2Q2TBE0 894 aaKnown RBP20.23■□□□□ 0.83
PBX1-215ENST00000559240 ZNF34Q8IZ26 560 aa20.23■□□□□ 0.83
PBX1-215ENST00000559240 H7C1W4 665 aa20.23■□□□□ 0.83
PBX1-215ENST00000559240 ZBTB3Q9H5J0 574 aa20.23■□□□□ 0.83
PBX1-215ENST00000559240 CWC25Q9NXE8 425 aaPredicted RBP20.23■□□□□ 0.83
PBX1-215ENST00000559240 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
PBX1-215ENST00000559240 APBA3O96018 575 aa20.22■□□□□ 0.83
PBX1-215ENST00000559240 IGHDP01880 384 aa20.22■□□□□ 0.83
PBX1-215ENST00000559240 SIRT2Q8IXJ6 389 aa20.22■□□□□ 0.83
PBX1-215ENST00000559240 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
PBX1-215ENST00000559240 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
PBX1-215ENST00000559240 SMC5Q8IY18 1101 aa20.21■□□□□ 0.83
PBX1-215ENST00000559240 NARFQ9UHQ1 456 aa20.21■□□□□ 0.83
PBX1-215ENST00000559240 SSFA2P28290 1259 aa20.21■□□□□ 0.83
PBX1-215ENST00000559240 ATP8B2P98198 1209 aa20.21■□□□□ 0.83
PBX1-215ENST00000559240 ZNF652Q9Y2D9 606 aa20.21■□□□□ 0.83
PBX1-215ENST00000559240 NBPF7P0C2Y1 421 aaPredicted RBP20.2■□□□□ 0.83
PBX1-215ENST00000559240 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.83
PBX1-215ENST00000559240 CDHR2Q9BYE9 1310 aa20.2■□□□□ 0.82
PBX1-215ENST00000559240 VGLL3A8MV65 326 aa20.2■□□□□ 0.82
PBX1-215ENST00000559240 HLFQ16534 295 aa20.2■□□□□ 0.82
PBX1-215ENST00000559240 GCC1Q96CN9 775 aa20.2■□□□□ 0.82
PBX1-215ENST00000559240 PARP10Q53GL7 1025 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 AK7Q96M32 723 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 PLA2G12BQ9BX93 195 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 GNPATO15228 680 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 HMMRO75330 724 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 PCCAP05165 728 aaPredicted RBP20.19■□□□□ 0.82
PBX1-215ENST00000559240 POLA2Q14181 598 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 CAMKK2Q96RR4 588 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 ARID3AQ99856 593 aa20.19■□□□□ 0.82
PBX1-215ENST00000559240 LRRFIP2Q9Y608 721 aaKnown RBP20.18■□□□□ 0.82
PBX1-215ENST00000559240 RABL6Q3YEC7 729 aaPredicted RBP20.18■□□□□ 0.82
PBX1-215ENST00000559240 NLRP10Q86W26 655 aa20.18■□□□□ 0.82
PBX1-215ENST00000559240 SSH3Q8TE77 659 aa20.18■□□□□ 0.82
PBX1-215ENST00000559240 DDRGK1Q96HY6 314 aa20.18■□□□□ 0.82
PBX1-215ENST00000559240 C1orf115Q9H7X2 142 aa20.17■□□□□ 0.82
PBX1-215ENST00000559240 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
PBX1-215ENST00000559240 KCNQ4P56696 695 aa20.17■□□□□ 0.82
PBX1-215ENST00000559240 KAZALD1Q96I82 304 aa20.17■□□□□ 0.82
PBX1-215ENST00000559240 DCTPP1Q9H773 170 aa20.17■□□□□ 0.82
PBX1-215ENST00000559240 USP42Q9H9J4 1324 aaKnown RBP20.17■□□□□ 0.82
PBX1-215ENST00000559240 ZBTB38Q8NAP3 1195 aaPredicted RBP20.17■□□□□ 0.82
PBX1-215ENST00000559240 MYH3P11055 1940 aa20.16■□□□□ 0.82
PBX1-215ENST00000559240 ATP5J2-PTCD1G3V325 749 aa20.16■□□□□ 0.82
PBX1-215ENST00000559240 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
PBX1-215ENST00000559240 ZNF330Q9Y3S2 320 aaPredicted RBP20.16■□□□□ 0.82
PBX1-215ENST00000559240 DDX60Q8IY21 1712 aaKnown RBP20.15■□□□□ 0.82
PBX1-215ENST00000559240 TRAPPC3LQ5T215 181 aa20.15■□□□□ 0.82
PBX1-215ENST00000559240 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
PBX1-215ENST00000559240 SUCLG2Q96I99 432 aa20.15■□□□□ 0.82
PBX1-215ENST00000559240 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
PBX1-215ENST00000559240 BCL2L12Q9HB09 334 aa20.15■□□□□ 0.82
PBX1-215ENST00000559240 BACH2Q9BYV9 841 aa20.14■□□□□ 0.82
PBX1-215ENST00000559240 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.82
PBX1-215ENST00000559240 RIC1Q4ADV7 1423 aa20.13■□□□□ 0.81
PBX1-215ENST00000559240 ZFP91Q96JP5 570 aaPredicted RBP20.12■□□□□ 0.81
PBX1-215ENST00000559240 ZNF830Q96NB3 372 aaPredicted RBP20.12■□□□□ 0.81
PBX1-215ENST00000559240 BAG6P46379 1132 aa20.12■□□□□ 0.81
PBX1-215ENST00000559240 AMIGO3Q86WK7 504 aa20.12■□□□□ 0.81
PBX1-215ENST00000559240 ZPR1O75312 459 aa20.11■□□□□ 0.81
PBX1-215ENST00000559240 HSP90B1P14625 803 aaKnown RBP20.11■□□□□ 0.81
PBX1-215ENST00000559240 FOXO4P98177 505 aa20.11■□□□□ 0.81
PBX1-215ENST00000559240 UBE3BQ7Z3V4 1068 aa20.11■□□□□ 0.81
PBX1-215ENST00000559240 PPP1R42Q7Z4L9 355 aa20.11■□□□□ 0.81
PBX1-215ENST00000559240 NRXN2Q9P2S2 1712 aa20.11■□□□□ 0.81
PBX1-215ENST00000559240 BICC1Q9H694 974 aaKnown RBP20.1■□□□□ 0.81
PBX1-215ENST00000559240 PNMA6EA0A0J9YXQ4 647 aa20.1■□□□□ 0.81
PBX1-215ENST00000559240 NUCB1Q02818 461 aa20.1■□□□□ 0.81
PBX1-215ENST00000559240 CASZ1Q86V15 1759 aa20.1■□□□□ 0.81
PBX1-215ENST00000559240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.09■□□□□ 0.81
PBX1-215ENST00000559240 NTSR2O95665 410 aa20.09■□□□□ 0.81
PBX1-215ENST00000559240 RFC4P35249 363 aa20.09■□□□□ 0.81
PBX1-215ENST00000559240 SF3B2Q13435 895 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms