RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ZIC5Q96T25 663 aa7.73□□□□□ -1.17
CASC4-206ENST00000558847 HINFPQ9BQA5 517 aa7.73□□□□□ -1.17
CASC4-206ENST00000558847 NEUROD4Q9HD90 331 aa7.73□□□□□ -1.17
CASC4-206ENST00000558847 ATAD2Q6PL18 1390 aa7.72□□□□□ -1.17
CASC4-206ENST00000558847 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
CASC4-206ENST00000558847 DGKGP49619 791 aa7.72□□□□□ -1.17
CASC4-206ENST00000558847 FAM182BQ5T319 152 aa7.72□□□□□ -1.17
CASC4-206ENST00000558847 C7orf43Q8WVR3 580 aa7.72□□□□□ -1.17
CASC4-206ENST00000558847 CLP1Q92989 425 aaKnown RBP7.72□□□□□ -1.17
CASC4-206ENST00000558847 MARK1Q9P0L2 795 aa7.72□□□□□ -1.17
CASC4-206ENST00000558847 ZNF232Q9UNY5 417 aa7.72□□□□□ -1.17
CASC4-206ENST00000558847 C1QTNF9BB2RNN3 333 aa7.71□□□□□ -1.18
CASC4-206ENST00000558847 FAM157BP0CG42 384 aa7.71□□□□□ -1.18
CASC4-206ENST00000558847 FCHSD1Q86WN1 690 aa7.71□□□□□ -1.18
CASC4-206ENST00000558847 AVENQ9NQS1 362 aaPredicted RBP7.71□□□□□ -1.18
CASC4-206ENST00000558847 FOXO3O43524 673 aa7.7□□□□□ -1.18
CASC4-206ENST00000558847 PRMT3O60678 531 aa7.7□□□□□ -1.18
CASC4-206ENST00000558847 FKBP5Q13451 457 aaPredicted RBP7.7□□□□□ -1.18
CASC4-206ENST00000558847 GZF1Q9H116 711 aaPredicted RBP7.7□□□□□ -1.18
CASC4-206ENST00000558847 KLF15Q9UIH9 416 aa7.7□□□□□ -1.18
CASC4-206ENST00000558847 ALAS2P22557 587 aa7.69□□□□□ -1.18
CASC4-206ENST00000558847 ZNF468Q5VIY5 522 aaPredicted RBP7.69□□□□□ -1.18
CASC4-206ENST00000558847 C1orf53Q5VUE5 145 aa7.69□□□□□ -1.18
CASC4-206ENST00000558847 LRRC69Q6ZNQ3 347 aa7.69□□□□□ -1.18
CASC4-206ENST00000558847 CD163Q86VB7 1156 aa7.69□□□□□ -1.18
CASC4-206ENST00000558847 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
CASC4-206ENST00000558847 PRIMPOLQ96LW4 560 aa7.69□□□□□ -1.18
CASC4-206ENST00000558847 PHACTR1Q9C0D0 580 aa7.69□□□□□ -1.18
CASC4-206ENST00000558847 CXXC1Q9P0U4 656 aaPredicted RBP7.69□□□□□ -1.18
CASC4-206ENST00000558847 GPC6Q9Y625 555 aaPredicted RBP7.69□□□□□ -1.18
CASC4-206ENST00000558847 RANGAP1P46060 587 aaPredicted RBP7.68□□□□□ -1.18
CASC4-206ENST00000558847 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
CASC4-206ENST00000558847 STRN4Q9NRL3 753 aa7.68□□□□□ -1.18
CASC4-206ENST00000558847 HCN2Q9UL51 889 aa7.68□□□□□ -1.18
CASC4-206ENST00000558847 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
CASC4-206ENST00000558847 GNEQ9Y223 722 aaKnown RBP7.68□□□□□ -1.18
CASC4-206ENST00000558847 CHMP3Q9Y3E7 222 aa7.68□□□□□ -1.18
CASC4-206ENST00000558847 CHRNA4P43681 627 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 XP32Q5T750 250 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 SAMD5Q5TGI4 173 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 ALDH16A1Q8IZ83 802 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 RHPN1Q8TCX5 695 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 PLVAPQ9BX97 442 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 QTRT2Q9H974 415 aaKnown RBP7.67□□□□□ -1.18
CASC4-206ENST00000558847 HCN4Q9Y3Q4 1203 aa7.67□□□□□ -1.18
CASC4-206ENST00000558847 CARNS1A5YM72 827 aa7.66□□□□□ -1.18
CASC4-206ENST00000558847 SYT9Q86SS6 491 aa7.66□□□□□ -1.18
CASC4-206ENST00000558847 ELOA3CA0A087WX78 387 aaPredicted RBP7.65□□□□□ -1.18
CASC4-206ENST00000558847 ELOA3DA6NLF2 546 aaPredicted RBP7.65□□□□□ -1.18
CASC4-206ENST00000558847 ATP2B4P23634 1241 aa7.65□□□□□ -1.18
CASC4-206ENST00000558847 ARID4AP29374 1257 aaPredicted RBP7.65□□□□□ -1.18
CASC4-206ENST00000558847 RTN1Q16799 776 aa7.65□□□□□ -1.18
CASC4-206ENST00000558847 ELOA3BQ3SY89 546 aa7.65□□□□□ -1.18
CASC4-206ENST00000558847 ELOA3Q8NG57 546 aa7.65□□□□□ -1.18
CASC4-206ENST00000558847 NGLY1Q96IV0 654 aa7.65□□□□□ -1.18
CASC4-206ENST00000558847 IVNS1ABPQ9Y6Y0 642 aa7.65□□□□□ -1.18
CASC4-206ENST00000558847 SPDYE3A6NKU9 549 aa7.64□□□□□ -1.19
CASC4-206ENST00000558847 EFSO43281 561 aa7.64□□□□□ -1.19
CASC4-206ENST00000558847 COL26A1Q96A83 441 aa7.64□□□□□ -1.19
CASC4-206ENST00000558847 TRIM11Q96F44 468 aa7.64□□□□□ -1.19
CASC4-206ENST00000558847 MYO19Q96H55 970 aa7.64□□□□□ -1.19
CASC4-206ENST00000558847 HSH2DQ96JZ2 352 aa7.64□□□□□ -1.19
CASC4-206ENST00000558847 SPATA31C1P0DKV0 1188 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 SSFA2P28290 1259 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 MFAP1P55081 439 aaKnown RBP7.63□□□□□ -1.19
CASC4-206ENST00000558847 NEUROD1Q13562 356 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 DOC2BQ14184 412 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 PRRT3Q5FWE3 981 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 CAPN12Q6ZSI9 719 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 SND1Q7KZF4 910 aaKnown RBP eCLIP7.63□□□□□ -1.19
CASC4-206ENST00000558847 ZNF280CQ8ND82 737 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 BCS1LQ9Y276 419 aa7.63□□□□□ -1.19
CASC4-206ENST00000558847 GATA4P43694 442 aa7.62□□□□□ -1.19
CASC4-206ENST00000558847 SFSWAPQ12872 951 aaKnown RBP7.62□□□□□ -1.19
CASC4-206ENST00000558847 PHLDB3Q6NSJ2 640 aa7.62□□□□□ -1.19
CASC4-206ENST00000558847 SUSD3Q96L08 255 aa7.62□□□□□ -1.19
CASC4-206ENST00000558847 MKNK1Q9BUB5 465 aa7.62□□□□□ -1.19
CASC4-206ENST00000558847 SEMA6BQ9H3T3 888 aa7.62□□□□□ -1.19
CASC4-206ENST00000558847 SIN3BO75182 1162 aa7.61□□□□□ -1.19
CASC4-206ENST00000558847 TYRO3Q06418 890 aa7.61□□□□□ -1.19
CASC4-206ENST00000558847 CCDC27Q2M243 656 aa7.61□□□□□ -1.19
CASC4-206ENST00000558847 VTI1AQ96AJ9 217 aa7.61□□□□□ -1.19
CASC4-206ENST00000558847 CEP63Q96MT8 703 aa7.61□□□□□ -1.19
CASC4-206ENST00000558847 LRFN2Q9ULH4 789 aa7.61□□□□□ -1.19
CASC4-206ENST00000558847 TGFBR3LH3BV60 316 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 M0R082 166 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 APBA3O96018 575 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 SCNN1AP37088 669 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 SPEM2Q0P670 501 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 IER5Q5VY09 327 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 RAB44Q7Z6P3 723 aaPredicted RBP7.6□□□□□ -1.19
CASC4-206ENST00000558847 NPM2Q86SE8 214 aaKnown RBP7.6□□□□□ -1.19
CASC4-206ENST00000558847 TXNDC2Q86VQ3 553 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 Q8N3U1 123 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 ZNF417Q8TAU3 575 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 ZNF587Q96SQ5 575 aaPredicted RBP7.6□□□□□ -1.19
CASC4-206ENST00000558847 SLC30A3Q99726 388 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 KLK14Q9P0G3 267 aa7.6□□□□□ -1.19
CASC4-206ENST00000558847 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms