RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 DICER1Q9UPY3 1922 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 C21orf2O43822 256 aa13.33□□□□□ -0.28
HNRNPC-225ENST00000556513 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
HNRNPC-225ENST00000556513 TSPYL6Q8N831 410 aa13.33□□□□□ -0.28
HNRNPC-225ENST00000556513 MASTLQ96GX5 879 aa13.33□□□□□ -0.28
HNRNPC-225ENST00000556513 TAF1P21675 1872 aa13.32□□□□□ -0.28
HNRNPC-225ENST00000556513 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-225ENST00000556513 STYK1Q6J9G0 422 aa13.32□□□□□ -0.28
HNRNPC-225ENST00000556513 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-225ENST00000556513 CNKSR1Q969H4 720 aa13.32□□□□□ -0.28
HNRNPC-225ENST00000556513 HYPKQ9NX55 129 aa13.32□□□□□ -0.28
HNRNPC-225ENST00000556513 RNF181Q9P0P0 153 aa13.32□□□□□ -0.28
HNRNPC-225ENST00000556513 NTSR2O95665 410 aa13.31□□□□□ -0.28
HNRNPC-225ENST00000556513 NPR1P16066 1061 aa13.31□□□□□ -0.28
HNRNPC-225ENST00000556513 PPP1R42Q7Z4L9 355 aa13.31□□□□□ -0.28
HNRNPC-225ENST00000556513 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-225ENST00000556513 GPBP1L1Q9HC44 474 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-225ENST00000556513 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-225ENST00000556513 TCERG1O14776 1098 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 PARP10Q53GL7 1025 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 ZNF521Q96K83 1311 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 IBTKQ9P2D0 1353 aaPredicted RBP13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 KLRG2A4D1S0 409 aaPredicted RBP13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 NFKBIEO00221 500 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 PRELPP51888 382 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 TCIRG1Q13488 830 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 HSP90AB3PQ58FF7 597 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 PLBD2Q8NHP8 589 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 UTP14AQ9BVJ6 771 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
HNRNPC-225ENST00000556513 ATP5J2-PTCD1G3V325 749 aa13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 CCDC30Q5VVM6 783 aa13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 C3orf67Q6ZVT6 689 aa13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 NLRP10Q86W26 655 aa13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 TRMT112Q9UI30 125 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-225ENST00000556513 FANCIQ9NVI1 1328 aa13.28□□□□□ -0.28
HNRNPC-225ENST00000556513 LMNB1P20700 586 aa13.28□□□□□ -0.28
HNRNPC-225ENST00000556513 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
HNRNPC-225ENST00000556513 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
HNRNPC-225ENST00000556513 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-225ENST00000556513 RIC1Q4ADV7 1423 aa13.27□□□□□ -0.28
HNRNPC-225ENST00000556513 HCLS1P14317 486 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 ALDH1B1P30837 517 aa13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 CRY2Q49AN0 593 aa13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 CEP350Q5VT06 3117 aa13.27□□□□□ -0.29
HNRNPC-225ENST00000556513 KCNA4P22459 653 aa13.26□□□□□ -0.29
HNRNPC-225ENST00000556513 C7orf43Q8WVR3 580 aa13.26□□□□□ -0.29
HNRNPC-225ENST00000556513 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
HNRNPC-225ENST00000556513 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
HNRNPC-225ENST00000556513 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 EXOSC9Q06265 439 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 CCDC93Q567U6 631 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 SOGA3Q5TF21 947 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 MYD88Q99836 296 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 ISCA1Q9BUE6 129 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
HNRNPC-225ENST00000556513 SLC10A5Q5PT55 438 aa13.24□□□□□ -0.29
HNRNPC-225ENST00000556513 G2E3Q7L622 706 aa13.24□□□□□ -0.29
HNRNPC-225ENST00000556513 SLC51AQ86UW1 340 aa13.24□□□□□ -0.29
HNRNPC-225ENST00000556513 RBM17Q96I25 401 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-225ENST00000556513 NMRK2Q9NPI5 230 aa13.24□□□□□ -0.29
HNRNPC-225ENST00000556513 MYH3P11055 1940 aa13.24□□□□□ -0.29
HNRNPC-225ENST00000556513 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
HNRNPC-225ENST00000556513 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
HNRNPC-225ENST00000556513 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-225ENST00000556513 ABCC4O15439 1325 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 PI4KAP2A4QPH2 592 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 KIF3CO14782 793 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 PI4KAP1Q8N8J0 262 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 PPEF1O14829 653 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 VAMP4O75379 141 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 CRAMP1Q96RY5 1269 aa13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 ZNF277Q9NRM2 450 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-225ENST00000556513 SPEF2Q9C093 1822 aa13.21□□□□□ -0.29
HNRNPC-225ENST00000556513 ZC3H4Q9UPT8 1303 aaKnown RBP13.21□□□□□ -0.3
HNRNPC-225ENST00000556513 E9PSI1 815 aa13.21□□□□□ -0.3
HNRNPC-225ENST00000556513 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.3
HNRNPC-225ENST00000556513 KSR2Q6VAB6 950 aa13.21□□□□□ -0.3
HNRNPC-225ENST00000556513 RTKN2Q8IZC4 609 aa13.21□□□□□ -0.3
HNRNPC-225ENST00000556513 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.3
HNRNPC-225ENST00000556513 RRAGCQ9HB90 399 aa13.21□□□□□ -0.3
HNRNPC-225ENST00000556513 COL4A1P02462 1669 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms