RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 JDP2Q8WYK2 163 aa20.47■□□□□ 0.87
BRF1-220ENST00000552127 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
BRF1-220ENST00000552127 IL6STP40189 918 aaPredicted RBP20.46■□□□□ 0.87
BRF1-220ENST00000552127 CIAPIN1Q6FI81 312 aa20.46■□□□□ 0.87
BRF1-220ENST00000552127 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
BRF1-220ENST00000552127 COL4A5P29400 1685 aa20.45■□□□□ 0.86
BRF1-220ENST00000552127 EIF6P56537 245 aaKnown RBP20.45■□□□□ 0.86
BRF1-220ENST00000552127 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
BRF1-220ENST00000552127 USP50Q70EL3 339 aaPredicted RBP20.45■□□□□ 0.86
BRF1-220ENST00000552127 KLRG2A4D1S0 409 aaPredicted RBP20.44■□□□□ 0.86
BRF1-220ENST00000552127 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
BRF1-220ENST00000552127 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
BRF1-220ENST00000552127 CELF2O95319 508 aaKnown RBP20.43■□□□□ 0.86
BRF1-220ENST00000552127 NEFMP07197 916 aa20.43■□□□□ 0.86
BRF1-220ENST00000552127 ZNF496Q96IT1 587 aaPredicted RBP20.43■□□□□ 0.86
BRF1-220ENST00000552127 HHIPL1Q96JK4 782 aa20.43■□□□□ 0.86
BRF1-220ENST00000552127 SNED1Q8TER0 1413 aa20.43■□□□□ 0.86
BRF1-220ENST00000552127 BTBD11A6QL63 1104 aa20.42■□□□□ 0.86
BRF1-220ENST00000552127 HTATSF1O43719 755 aaKnown RBP20.42■□□□□ 0.86
BRF1-220ENST00000552127 MCM10Q7L590 875 aa20.42■□□□□ 0.86
BRF1-220ENST00000552127 NPM2Q86SE8 214 aaKnown RBP20.42■□□□□ 0.86
BRF1-220ENST00000552127 PSMD1Q99460 953 aa20.42■□□□□ 0.86
BRF1-220ENST00000552127 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
BRF1-220ENST00000552127 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
BRF1-220ENST00000552127 A1BGP04217 495 aa20.41■□□□□ 0.86
BRF1-220ENST00000552127 FMNL2Q96PY5 1086 aa20.41■□□□□ 0.86
BRF1-220ENST00000552127 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
BRF1-220ENST00000552127 PLEKHF1Q96S99 279 aa20.4■□□□□ 0.86
BRF1-220ENST00000552127 ZIC5Q96T25 663 aa20.4■□□□□ 0.86
BRF1-220ENST00000552127 ALDH1B1P30837 517 aa20.39■□□□□ 0.85
BRF1-220ENST00000552127 ZEB1P37275 1124 aaPredicted RBP20.39■□□□□ 0.85
BRF1-220ENST00000552127 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
BRF1-220ENST00000552127 MAPK8IP3Q9UPT6 1336 aa20.38■□□□□ 0.85
BRF1-220ENST00000552127 KCNQ3O43525 872 aa20.38■□□□□ 0.85
BRF1-220ENST00000552127 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
BRF1-220ENST00000552127 GLIS2Q9BZE0 524 aaPredicted RBP20.37■□□□□ 0.85
BRF1-220ENST00000552127 ZNF408Q9H9D4 720 aa20.37■□□□□ 0.85
BRF1-220ENST00000552127 NOGQ13253 232 aa20.36■□□□□ 0.85
BRF1-220ENST00000552127 NFE2L2Q16236 605 aa20.36■□□□□ 0.85
BRF1-220ENST00000552127 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
BRF1-220ENST00000552127 TPTE2Q6XPS3 522 aa20.36■□□□□ 0.85
BRF1-220ENST00000552127 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
BRF1-220ENST00000552127 ADARB2Q9NS39 739 aaKnown RBP20.36■□□□□ 0.85
BRF1-220ENST00000552127 GPRC5DQ9NZD1 345 aa20.34■□□□□ 0.85
BRF1-220ENST00000552127 FAM177BA6PVY3 158 aa20.33■□□□□ 0.85
BRF1-220ENST00000552127 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
BRF1-220ENST00000552127 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.85
BRF1-220ENST00000552127 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
BRF1-220ENST00000552127 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
BRF1-220ENST00000552127 SAGE1Q9NXZ1 904 aa20.32■□□□□ 0.84
BRF1-220ENST00000552127 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
BRF1-220ENST00000552127 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
BRF1-220ENST00000552127 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
BRF1-220ENST00000552127 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
BRF1-220ENST00000552127 NIM1KQ8IY84 436 aa20.3■□□□□ 0.84
BRF1-220ENST00000552127 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
BRF1-220ENST00000552127 HUNKP57058 714 aa20.29■□□□□ 0.84
BRF1-220ENST00000552127 PNISRQ8TF01 805 aaKnown RBP20.29■□□□□ 0.84
BRF1-220ENST00000552127 GCC1Q96CN9 775 aa20.29■□□□□ 0.84
BRF1-220ENST00000552127 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
BRF1-220ENST00000552127 USP16Q9Y5T5 823 aa20.29■□□□□ 0.84
BRF1-220ENST00000552127 AKAP11Q9UKA4 1901 aa20.28■□□□□ 0.84
BRF1-220ENST00000552127 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
BRF1-220ENST00000552127 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
BRF1-220ENST00000552127 SLC51AQ86UW1 340 aa20.28■□□□□ 0.84
BRF1-220ENST00000552127 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
BRF1-220ENST00000552127 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
BRF1-220ENST00000552127 FAM155AB1AL88 458 aaPredicted RBP20.27■□□□□ 0.84
BRF1-220ENST00000552127 TRPA1O75762 1119 aa20.27■□□□□ 0.84
BRF1-220ENST00000552127 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
BRF1-220ENST00000552127 CDC37L1Q7L3B6 337 aa20.27■□□□□ 0.84
BRF1-220ENST00000552127 CTU1Q7Z7A3 348 aaKnown RBP20.27■□□□□ 0.84
BRF1-220ENST00000552127 RNF186Q9NXI6 227 aa20.27■□□□□ 0.84
BRF1-220ENST00000552127 NUP98P52948 1817 aa20.26■□□□□ 0.83
BRF1-220ENST00000552127 GMPSP49915 693 aaPredicted RBP20.26■□□□□ 0.83
BRF1-220ENST00000552127 HIRAP54198 1017 aaPredicted RBP20.26■□□□□ 0.83
BRF1-220ENST00000552127 GRIPAP1Q4V328 841 aa20.26■□□□□ 0.83
BRF1-220ENST00000552127 ZC3H15Q8WU90 426 aaKnown RBP20.26■□□□□ 0.83
BRF1-220ENST00000552127 HPS5Q9UPZ3 1129 aa20.26■□□□□ 0.83
BRF1-220ENST00000552127 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
BRF1-220ENST00000552127 PPIP5K2O43314 1243 aa20.25■□□□□ 0.83
BRF1-220ENST00000552127 RIPK4P57078 832 aa20.25■□□□□ 0.83
BRF1-220ENST00000552127 KIF23Q02241 960 aaPredicted RBP20.25■□□□□ 0.83
BRF1-220ENST00000552127 CXCL9Q07325 125 aa20.25■□□□□ 0.83
BRF1-220ENST00000552127 RGMBQ6NW40 437 aa20.25■□□□□ 0.83
BRF1-220ENST00000552127 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
BRF1-220ENST00000552127 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
BRF1-220ENST00000552127 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
BRF1-220ENST00000552127 AOC3Q16853 763 aa20.24■□□□□ 0.83
BRF1-220ENST00000552127 HABP4Q5JVS0 413 aaKnown RBP20.24■□□□□ 0.83
BRF1-220ENST00000552127 DLK2Q6UY11 383 aa20.24■□□□□ 0.83
BRF1-220ENST00000552127 CCDC146Q8IYE0 955 aa20.24■□□□□ 0.83
BRF1-220ENST00000552127 RGL2O15211 777 aa20.23■□□□□ 0.83
BRF1-220ENST00000552127 USP48Q86UV5 1035 aa20.23■□□□□ 0.83
BRF1-220ENST00000552127 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
BRF1-220ENST00000552127 RPGRQ92834 1020 aaKnown RBP20.23■□□□□ 0.83
BRF1-220ENST00000552127 HOXA10P31260 410 aaPredicted RBP20.22■□□□□ 0.83
BRF1-220ENST00000552127 EIF4A1P60842 406 aaKnown RBP20.22■□□□□ 0.83
BRF1-220ENST00000552127 HLFQ16534 295 aa20.22■□□□□ 0.83
BRF1-220ENST00000552127 TRPM4Q8TD43 1214 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms