RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 ANKRD31Q8N7Z5 1873 aa21.86■■□□□ 1.09
BRF1-217ENST00000550375 TRIM28Q13263 835 aaKnown RBP21.86■■□□□ 1.09
BRF1-217ENST00000550375 ERFEQ4G0M1 354 aa21.86■■□□□ 1.09
BRF1-217ENST00000550375 CWC25Q9NXE8 425 aaPredicted RBP21.86■■□□□ 1.09
BRF1-217ENST00000550375 NEURL1BA8MQ27 555 aa21.85■■□□□ 1.09
BRF1-217ENST00000550375 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
BRF1-217ENST00000550375 RTL5Q5HYW3 569 aaPredicted RBP21.85■■□□□ 1.09
BRF1-217ENST00000550375 BEND3Q5T5X7 828 aa21.85■■□□□ 1.09
BRF1-217ENST00000550375 CCDC191Q8NCU4 936 aa21.85■■□□□ 1.09
BRF1-217ENST00000550375 LINS1Q8NG48 757 aa21.85■■□□□ 1.09
BRF1-217ENST00000550375 API5Q9BZZ5 524 aaKnown RBP21.85■■□□□ 1.09
BRF1-217ENST00000550375 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
BRF1-217ENST00000550375 SYNE4Q8N205 404 aa21.84■■□□□ 1.09
BRF1-217ENST00000550375 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
BRF1-217ENST00000550375 CD2APQ9Y5K6 639 aa21.84■■□□□ 1.09
BRF1-217ENST00000550375 N4BP2Q86UW6 1770 aaPredicted RBP21.83■■□□□ 1.09
BRF1-217ENST00000550375 ZKSCAN2Q63HK3 967 aa21.83■■□□□ 1.08
BRF1-217ENST00000550375 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.08
BRF1-217ENST00000550375 FAM89AQ96GI7 184 aa21.83■■□□□ 1.08
BRF1-217ENST00000550375 SYT17Q9BSW7 474 aa21.83■■□□□ 1.08
BRF1-217ENST00000550375 TNNQ9UQP3 1299 aa21.83■■□□□ 1.08
BRF1-217ENST00000550375 ABCC12Q96J65 1359 aa21.82■■□□□ 1.08
BRF1-217ENST00000550375 NLGN2Q8NFZ4 835 aa21.82■■□□□ 1.08
BRF1-217ENST00000550375 SRCIN1Q9C0H9 1055 aa21.82■■□□□ 1.08
BRF1-217ENST00000550375 SH3TC1Q8TE82 1336 aa21.82■■□□□ 1.08
BRF1-217ENST00000550375 TRIM27P14373 513 aa21.81■■□□□ 1.08
BRF1-217ENST00000550375 GCKRQ14397 625 aa21.81■■□□□ 1.08
BRF1-217ENST00000550375 ATF7IPQ6VMQ6 1270 aa21.81■■□□□ 1.08
BRF1-217ENST00000550375 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
BRF1-217ENST00000550375 BRIP1Q9BX63 1249 aa21.81■■□□□ 1.08
BRF1-217ENST00000550375 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
BRF1-217ENST00000550375 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
BRF1-217ENST00000550375 PXDNLA1KZ92 1463 aa21.79■■□□□ 1.08
BRF1-217ENST00000550375 A0A0G2JLW4 131 aa21.79■■□□□ 1.08
BRF1-217ENST00000550375 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
BRF1-217ENST00000550375 HCLS1P14317 486 aaPredicted RBP21.79■■□□□ 1.08
BRF1-217ENST00000550375 CHRNA5P30532 468 aa21.79■■□□□ 1.08
BRF1-217ENST00000550375 ZBTB38Q8NAP3 1195 aaPredicted RBP21.79■■□□□ 1.08
BRF1-217ENST00000550375 RNF123Q5XPI4 1314 aa21.79■■□□□ 1.08
BRF1-217ENST00000550375 DDX60Q8IY21 1712 aaKnown RBP21.79■■□□□ 1.08
BRF1-217ENST00000550375 ALDH1L1O75891 902 aa21.78■■□□□ 1.08
BRF1-217ENST00000550375 DPEP1P16444 411 aa21.78■■□□□ 1.08
BRF1-217ENST00000550375 PDE6BP35913 854 aa21.78■■□□□ 1.08
BRF1-217ENST00000550375 C2CD5Q86YS7 1000 aa21.78■■□□□ 1.08
BRF1-217ENST00000550375 COL11A2P13942 1736 aaPredicted RBP21.77■■□□□ 1.08
BRF1-217ENST00000550375 LAMB2P55268 1798 aa21.77■■□□□ 1.08
BRF1-217ENST00000550375 PLIN1O60240 522 aa21.77■■□□□ 1.08
BRF1-217ENST00000550375 TGFB2P61812 414 aa21.77■■□□□ 1.08
BRF1-217ENST00000550375 SLC10A5Q5PT55 438 aa21.77■■□□□ 1.08
BRF1-217ENST00000550375 UBE3BQ7Z3V4 1068 aa21.77■■□□□ 1.08
BRF1-217ENST00000550375 IRS4O14654 1257 aaPredicted RBP21.76■■□□□ 1.07
BRF1-217ENST00000550375 YY1P25490 414 aa21.76■■□□□ 1.07
BRF1-217ENST00000550375 CCT4P50991 539 aaKnown RBP21.76■■□□□ 1.07
BRF1-217ENST00000550375 C3orf67Q6ZVT6 689 aa21.76■■□□□ 1.07
BRF1-217ENST00000550375 WWC3Q9ULE0 1092 aa21.76■■□□□ 1.07
BRF1-217ENST00000550375 ABCC4O15439 1325 aa21.76■■□□□ 1.07
BRF1-217ENST00000550375 H0YIN7 160 aa21.75■■□□□ 1.07
BRF1-217ENST00000550375 H7C1W4 665 aa21.75■■□□□ 1.07
BRF1-217ENST00000550375 FTSJ3Q8IY81 847 aaKnown RBP21.75■■□□□ 1.07
BRF1-217ENST00000550375 C9orf78Q9NZ63 289 aaPredicted RBP21.75■■□□□ 1.07
BRF1-217ENST00000550375 NLRP3Q96P20 1036 aa21.74■■□□□ 1.07
BRF1-217ENST00000550375 DLEC1Q9Y238 1755 aa21.74■■□□□ 1.07
BRF1-217ENST00000550375 RIC1Q4ADV7 1423 aa21.74■■□□□ 1.07
BRF1-217ENST00000550375 GRM8O00222 908 aa21.74■■□□□ 1.07
BRF1-217ENST00000550375 DZIP1LQ8IYY4 767 aaKnown RBP21.74■■□□□ 1.07
BRF1-217ENST00000550375 CACNA1SQ13698 1873 aa21.73■■□□□ 1.07
BRF1-217ENST00000550375 CDHR2Q9BYE9 1310 aa21.73■■□□□ 1.07
BRF1-217ENST00000550375 INTS3Q68E01 1043 aaKnown RBP21.73■■□□□ 1.07
BRF1-217ENST00000550375 TMEM57Q8N5G2 664 aa21.73■■□□□ 1.07
BRF1-217ENST00000550375 ZNF622Q969S3 477 aaKnown RBP eCLIP21.73■■□□□ 1.07
BRF1-217ENST00000550375 MYH3P11055 1940 aa21.72■■□□□ 1.07
BRF1-217ENST00000550375 KLRG2A4D1S0 409 aaPredicted RBP21.72■■□□□ 1.07
BRF1-217ENST00000550375 RLBP1P12271 317 aa21.72■■□□□ 1.07
BRF1-217ENST00000550375 KCNA3P22001 575 aa21.72■■□□□ 1.07
BRF1-217ENST00000550375 CASP7P55210 303 aa21.72■■□□□ 1.07
BRF1-217ENST00000550375 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.72■■□□□ 1.07
BRF1-217ENST00000550375 PANK1Q8TE04 598 aa21.72■■□□□ 1.07
BRF1-217ENST00000550375 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
BRF1-217ENST00000550375 BRCA1P38398 1863 aaKnown RBP21.72■■□□□ 1.07
BRF1-217ENST00000550375 PDE8AO60658 829 aa21.71■■□□□ 1.07
BRF1-217ENST00000550375 NBPF7P0C2Y1 421 aaPredicted RBP21.71■■□□□ 1.07
BRF1-217ENST00000550375 SRGNP10124 158 aa21.71■■□□□ 1.07
BRF1-217ENST00000550375 PELP1Q8IZL8 1130 aaKnown RBP21.71■■□□□ 1.07
BRF1-217ENST00000550375 RPGRQ92834 1020 aaKnown RBP21.71■■□□□ 1.07
BRF1-217ENST00000550375 HSP90B1P14625 803 aaKnown RBP21.7■■□□□ 1.06
BRF1-217ENST00000550375 NPR1P16066 1061 aa21.7■■□□□ 1.06
BRF1-217ENST00000550375 CRY2Q49AN0 593 aa21.7■■□□□ 1.06
BRF1-217ENST00000550375 MASTLQ96GX5 879 aa21.7■■□□□ 1.06
BRF1-217ENST00000550375 USP44Q9H0E7 712 aa21.7■■□□□ 1.06
BRF1-217ENST00000550375 PIM2Q9P1W9 311 aa21.7■■□□□ 1.06
BRF1-217ENST00000550375 TAF1P21675 1872 aa21.69■■□□□ 1.06
BRF1-217ENST00000550375 ITPRIPQ8IWB1 547 aa21.69■■□□□ 1.06
BRF1-217ENST00000550375 CCDC85AQ96PX6 553 aaPredicted RBP21.69■■□□□ 1.06
BRF1-217ENST00000550375 MS4A1P11836 297 aa21.68■■□□□ 1.06
BRF1-217ENST00000550375 STYK1Q6J9G0 422 aa21.68■■□□□ 1.06
BRF1-217ENST00000550375 UTYO14607 1347 aa21.67■■□□□ 1.06
BRF1-217ENST00000550375 CTSWP56202 376 aa21.67■■□□□ 1.06
BRF1-217ENST00000550375 RBM17Q96I25 401 aaKnown RBP21.67■■□□□ 1.06
BRF1-217ENST00000550375 SUCLG2Q96I99 432 aa21.67■■□□□ 1.06
BRF1-217ENST00000550375 RRP1P56182 461 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms