RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 CCDC171Q6TFL3 1326 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 NPHP3Q7Z494 1330 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 H2AFXP16104 143 aaPredicted RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 CDC25BP30305 580 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 CYP2C19P33261 490 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 PTPN14Q15678 1187 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 ERCC6LQ2NKX8 1250 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 IPO4Q8TEX9 1081 aaKnown RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 GTF3C6Q969F1 213 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 SH2B1Q9NRF2 756 aaPredicted RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 NBPF7P0C2Y1 421 aaPredicted RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 HNRNPH2P55795 449 aaKnown RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 CNTROBQ8N137 903 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 CCAR2Q8N163 923 aaKnown RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 NUDT16Q96DE0 195 aaKnown RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 ERO1AQ96HE7 468 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 SPATA32Q96LK8 384 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 TM6SF1Q9BZW5 370 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 CYP46A1Q9Y6A2 500 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
DDX47-212ENST00000545038 PRR36Q9H6K5 1346 aa9.37□□□□□ -0.91
DDX47-212ENST00000545038 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 CCDC66A2RUB6 948 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 CCDC69A6NI79 296 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 IFIT2P09913 472 aaKnown RBP9.36□□□□□ -0.91
DDX47-212ENST00000545038 UBTFL1P0CB47 393 aaPredicted RBP9.36□□□□□ -0.91
DDX47-212ENST00000545038 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 SARM1Q6SZW1 724 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 FILIP1Q7Z7B0 1213 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 DDX11Q96FC9 970 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 ZSCAN31Q96LW9 406 aaPredicted RBP9.36□□□□□ -0.91
DDX47-212ENST00000545038 PHAXQ9H814 394 aaKnown RBP9.36□□□□□ -0.91
DDX47-212ENST00000545038 DDX19AQ9NUU7 478 aaKnown RBP9.36□□□□□ -0.91
DDX47-212ENST00000545038 FANCGO15287 622 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 CLCN6P51797 869 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 SLC20A2Q08357 652 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 TOB2Q14106 344 aaPredicted RBP9.36□□□□□ -0.91
DDX47-212ENST00000545038 NBPF11Q86T75 865 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 STK31Q9BXU1 1019 aa9.36□□□□□ -0.91
DDX47-212ENST00000545038 SRGAP3O43295 1099 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 JAK2O60674 1132 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 SLU7O95391 586 aaKnown RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 E4F1Q66K89 784 aaPredicted RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 CREB3L3Q68CJ9 461 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 DHX40Q8IX18 779 aaKnown RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 ERCC4Q92889 916 aaPredicted RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 FAM227BQ96M60 508 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDX47-212ENST00000545038 SCAND2PQ9GZW5 306 aaPredicted RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 RBM8AQ9Y5S9 174 aaKnown RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 MAP3K5Q99683 1374 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 CEP170BQ9Y4F5 1589 aaPredicted RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 MYH15Q9Y2K3 1946 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 NPHP4O75161 1426 aaPredicted RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 ADGRL3Q9HAR2 1447 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 LRRC37A3O60309 1634 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 SOX12O15370 315 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 L2HGDHQ9H9P8 463 aa9.35□□□□□ -0.91
DDX47-212ENST00000545038 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 USP42Q9H9J4 1324 aaKnown RBP9.35□□□□□ -0.91
DDX47-212ENST00000545038 OVOS2A0A0J9YW53 1432 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 OVOS2Q6IE36 1432 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 PNMA6AP0CW24 399 aaPredicted RBP9.34□□□□□ -0.91
DDX47-212ENST00000545038 STK3Q13188 491 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 BICD2Q8TD16 824 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 NOL10Q9BSC4 688 aaKnown RBP9.34□□□□□ -0.91
DDX47-212ENST00000545038 GOLPH3LQ9H4A5 285 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 GOLGA6L4A6NEF3 574 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 ZRANB2O95218 330 aaKnown RBP eCLIP9.34□□□□□ -0.91
DDX47-212ENST00000545038 CDK11BP21127 795 aaKnown RBP9.34□□□□□ -0.91
DDX47-212ENST00000545038 RESTQ13127 1097 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 KCND1Q9NSA2 647 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 STAG3Q9UJ98 1225 aa9.34□□□□□ -0.91
DDX47-212ENST00000545038 NRXN3Q9Y4C0 1643 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 METP08581 1390 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 PXDNLA1KZ92 1463 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 SPATA31D1Q6ZQQ2 1576 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 SLC27A2O14975 620 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 ADD1P35611 737 aaKnown RBP9.33□□□□□ -0.92
DDX47-212ENST00000545038 RAD51AP2Q09MP3 1159 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 SNW1Q13573 536 aaKnown RBP9.33□□□□□ -0.92
DDX47-212ENST00000545038 CCDC30Q5VVM6 783 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 NEK11Q8NG66 645 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 MAP4K1Q92918 833 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 CALCOCO1Q9P1Z2 691 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 FEZ2Q9UHY8 353 aaPredicted RBP9.33□□□□□ -0.92
DDX47-212ENST00000545038 PPP6R1Q9UPN7 881 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 FMN2Q9NZ56 1722 aa9.33□□□□□ -0.92
DDX47-212ENST00000545038 ST5P78524 1137 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms