RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
DDB1-222ENST00000543627 NTSR2O95665 410 aa14.16□□□□□ -0.14
DDB1-222ENST00000543627 NPR1P16066 1061 aa14.16□□□□□ -0.14
DDB1-222ENST00000543627 JARID2Q92833 1246 aaPredicted RBP14.16□□□□□ -0.14
DDB1-222ENST00000543627 CDCA7LQ96GN5 454 aa14.16□□□□□ -0.14
DDB1-222ENST00000543627 NLRP3Q96P20 1036 aa14.16□□□□□ -0.14
DDB1-222ENST00000543627 KIAA1551Q9HCM1 1747 aa14.15□□□□□ -0.14
DDB1-222ENST00000543627 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
DDB1-222ENST00000543627 PI4KAP2A4QPH2 592 aa14.15□□□□□ -0.14
DDB1-222ENST00000543627 RASSF7Q02833 373 aa14.15□□□□□ -0.14
DDB1-222ENST00000543627 FKBP5Q13451 457 aaPredicted RBP14.15□□□□□ -0.14
DDB1-222ENST00000543627 STYK1Q6J9G0 422 aa14.15□□□□□ -0.14
DDB1-222ENST00000543627 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
DDB1-222ENST00000543627 PI4KAP1Q8N8J0 262 aa14.15□□□□□ -0.14
DDB1-222ENST00000543627 FAM89AQ96GI7 184 aa14.15□□□□□ -0.14
DDB1-222ENST00000543627 CHD4Q14839 1912 aa14.14□□□□□ -0.15
DDB1-222ENST00000543627 E9PSI1 815 aa14.14□□□□□ -0.15
DDB1-222ENST00000543627 C9orf131Q5VYM1 1079 aa14.14□□□□□ -0.15
DDB1-222ENST00000543627 ZNF784Q8NCA9 323 aaPredicted RBP14.14□□□□□ -0.15
DDB1-222ENST00000543627 RBM17Q96I25 401 aaKnown RBP14.14□□□□□ -0.15
DDB1-222ENST00000543627 ANKRD31Q8N7Z5 1873 aa14.14□□□□□ -0.15
DDB1-222ENST00000543627 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
DDB1-222ENST00000543627 ALDH1B1P30837 517 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 HNRNPUQ00839 825 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDB1-222ENST00000543627 NEXNQ0ZGT2 675 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 FLIIQ13045 1269 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 KSR2Q6VAB6 950 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 C3orf67Q6ZVT6 689 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 ISCA1Q9BUE6 129 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 RNF181Q9P0P0 153 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 ZNF521Q96K83 1311 aa14.13□□□□□ -0.15
DDB1-222ENST00000543627 SLFN5Q08AF3 891 aa14.12□□□□□ -0.15
DDB1-222ENST00000543627 OLFM4Q6UX06 510 aa14.12□□□□□ -0.15
DDB1-222ENST00000543627 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
DDB1-222ENST00000543627 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
DDB1-222ENST00000543627 CWC25Q9NXE8 425 aaPredicted RBP14.11□□□□□ -0.15
DDB1-222ENST00000543627 KLRG2A4D1S0 409 aaPredicted RBP14.1□□□□□ -0.15
DDB1-222ENST00000543627 IRS4O14654 1257 aaPredicted RBP14.1□□□□□ -0.15
DDB1-222ENST00000543627 CWF19L2Q2TBE0 894 aaKnown RBP14.1□□□□□ -0.15
DDB1-222ENST00000543627 SLC10A5Q5PT55 438 aa14.1□□□□□ -0.15
DDB1-222ENST00000543627 DDX46Q7L014 1031 aaKnown RBP14.1□□□□□ -0.15
DDB1-222ENST00000543627 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
DDB1-222ENST00000543627 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
DDB1-222ENST00000543627 BRCA1P38398 1863 aaKnown RBP14.1□□□□□ -0.15
DDB1-222ENST00000543627 CACNA1SQ13698 1873 aa14.1□□□□□ -0.15
DDB1-222ENST00000543627 F6X3S4 739 aa14.09□□□□□ -0.15
DDB1-222ENST00000543627 CCDC93Q567U6 631 aa14.09□□□□□ -0.15
DDB1-222ENST00000543627 SLC4A10Q6U841 1118 aa14.09□□□□□ -0.15
DDB1-222ENST00000543627 CCDC191Q8NCU4 936 aa14.09□□□□□ -0.15
DDB1-222ENST00000543627 GPBP1L1Q9HC44 474 aaPredicted RBP14.09□□□□□ -0.15
DDB1-222ENST00000543627 COL11A2P13942 1736 aaPredicted RBP14.09□□□□□ -0.15
DDB1-222ENST00000543627 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
DDB1-222ENST00000543627 PPEF1O14829 653 aaPredicted RBP14.08□□□□□ -0.16
DDB1-222ENST00000543627 SOGA3Q5TF21 947 aa14.08□□□□□ -0.16
DDB1-222ENST00000543627 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
DDB1-222ENST00000543627 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
DDB1-222ENST00000543627 TAOK3Q9H2K8 898 aa14.08□□□□□ -0.16
DDB1-222ENST00000543627 SLX4Q8IY92 1834 aa14.08□□□□□ -0.16
DDB1-222ENST00000543627 ADCY9O60503 1353 aa14.08□□□□□ -0.16
DDB1-222ENST00000543627 ARFGEF1Q9Y6D6 1849 aa14.07□□□□□ -0.16
DDB1-222ENST00000543627 NFKBIEO00221 500 aa14.07□□□□□ -0.16
DDB1-222ENST00000543627 IGKV5-2P06315 115 aa14.07□□□□□ -0.16
DDB1-222ENST00000543627 LMNB1P20700 586 aa14.07□□□□□ -0.16
DDB1-222ENST00000543627 TRIM28Q13263 835 aaKnown RBP14.07□□□□□ -0.16
DDB1-222ENST00000543627 CRY2Q49AN0 593 aa14.07□□□□□ -0.16
DDB1-222ENST00000543627 CRAMP1Q96RY5 1269 aa14.07□□□□□ -0.16
DDB1-222ENST00000543627 RNF123Q5XPI4 1314 aa14.07□□□□□ -0.16
DDB1-222ENST00000543627 TNRC6CQ9HCJ0 1690 aaKnown RBP14.07□□□□□ -0.16
DDB1-222ENST00000543627 ANKRD36CQ5JPF3 1778 aa14.06□□□□□ -0.16
DDB1-222ENST00000543627 ARFGEF2Q9Y6D5 1785 aa14.06□□□□□ -0.16
DDB1-222ENST00000543627 NEURL1BA8MQ27 555 aa14.06□□□□□ -0.16
DDB1-222ENST00000543627 PCCAP05165 728 aaPredicted RBP14.06□□□□□ -0.16
DDB1-222ENST00000543627 SLC51AQ86UW1 340 aa14.06□□□□□ -0.16
DDB1-222ENST00000543627 ZNF277Q9NRM2 450 aaPredicted RBP14.06□□□□□ -0.16
DDB1-222ENST00000543627 ABCC4O15439 1325 aa14.06□□□□□ -0.16
DDB1-222ENST00000543627 DLEC1Q9Y238 1755 aa14.06□□□□□ -0.16
DDB1-222ENST00000543627 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
DDB1-222ENST00000543627 HOXA10P31260 410 aaPredicted RBP14.05□□□□□ -0.16
DDB1-222ENST00000543627 PRELPP51888 382 aa14.05□□□□□ -0.16
DDB1-222ENST00000543627 RTKN2Q8IZC4 609 aa14.05□□□□□ -0.16
DDB1-222ENST00000543627 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
DDB1-222ENST00000543627 SSH1Q8WYL5 1049 aa14.05□□□□□ -0.16
DDB1-222ENST00000543627 SMC4Q9NTJ3 1288 aa14.05□□□□□ -0.16
DDB1-222ENST00000543627 PDE8AO60658 829 aa14.04□□□□□ -0.16
DDB1-222ENST00000543627 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
DDB1-222ENST00000543627 C7orf43Q8WVR3 580 aa14.04□□□□□ -0.16
DDB1-222ENST00000543627 BBOX1O75936 387 aa14.03□□□□□ -0.16
DDB1-222ENST00000543627 FKBP4Q02790 459 aaKnown RBP eCLIP14.03□□□□□ -0.16
DDB1-222ENST00000543627 GRAPQ13588 217 aa14.03□□□□□ -0.16
DDB1-222ENST00000543627 GCKRQ14397 625 aa14.03□□□□□ -0.16
DDB1-222ENST00000543627 LINS1Q8NG48 757 aa14.03□□□□□ -0.16
DDB1-222ENST00000543627 GRAPLQ8TC17 118 aaPredicted RBP14.03□□□□□ -0.16
DDB1-222ENST00000543627 SEC31BQ9NQW1 1179 aa14.03□□□□□ -0.16
DDB1-222ENST00000543627 SF3B3Q15393 1217 aaKnown RBP14.02□□□□□ -0.17
DDB1-222ENST00000543627 CCDC152Q4G0S7 254 aa14.02□□□□□ -0.17
DDB1-222ENST00000543627 TRMT2AQ8IZ69 625 aaKnown RBP14.02□□□□□ -0.17
DDB1-222ENST00000543627 CELF1Q92879 486 aaKnown RBP14.02□□□□□ -0.17
DDB1-222ENST00000543627 RRAGCQ9HB90 399 aa14.02□□□□□ -0.17
DDB1-222ENST00000543627 C9orf78Q9NZ63 289 aaPredicted RBP14.02□□□□□ -0.17
DDB1-222ENST00000543627 CHMP3Q9Y3E7 222 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms