RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 A0A0D9SFI3 127 aa20.49■□□□□ 0.87
EPB41L3-204ENST00000540638 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
EPB41L3-204ENST00000540638 RGPD1P0DJD0 1748 aa20.49■□□□□ 0.87
EPB41L3-204ENST00000540638 LMBRD1Q9NUN5 540 aa20.49■□□□□ 0.87
EPB41L3-204ENST00000540638 PTMAP06454 111 aaKnown RBP20.49■□□□□ 0.87
EPB41L3-204ENST00000540638 ZSCAN23Q3MJ62 389 aa20.49■□□□□ 0.87
EPB41L3-204ENST00000540638 LSG1Q9H089 658 aaKnown RBP20.49■□□□□ 0.87
EPB41L3-204ENST00000540638 TTC41PQ6P2S7 1318 aa20.48■□□□□ 0.87
EPB41L3-204ENST00000540638 GOLIM4O00461 696 aa20.48■□□□□ 0.87
EPB41L3-204ENST00000540638 RRAGDQ9NQL2 400 aaPredicted RBP20.48■□□□□ 0.87
EPB41L3-204ENST00000540638 LIMCH1Q9UPQ0 1083 aa20.48■□□□□ 0.87
EPB41L3-204ENST00000540638 ANAPC15P60006 121 aa20.48■□□□□ 0.87
EPB41L3-204ENST00000540638 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
EPB41L3-204ENST00000540638 LTN1O94822 1766 aa20.47■□□□□ 0.87
EPB41L3-204ENST00000540638 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
EPB41L3-204ENST00000540638 ADAMTS2O95450 1211 aa20.46■□□□□ 0.87
EPB41L3-204ENST00000540638 LARGE1O95461 756 aa20.46■□□□□ 0.87
EPB41L3-204ENST00000540638 PRIM1P49642 420 aaKnown RBP20.46■□□□□ 0.87
EPB41L3-204ENST00000540638 BLOC1S2Q6QNY1 142 aa20.46■□□□□ 0.87
EPB41L3-204ENST00000540638 IL2RBP14784 551 aa20.46■□□□□ 0.87
EPB41L3-204ENST00000540638 HSP90AB3PQ58FF7 597 aa20.46■□□□□ 0.87
EPB41L3-204ENST00000540638 CNPY2Q9Y2B0 182 aa20.46■□□□□ 0.87
EPB41L3-204ENST00000540638 RNF20Q5VTR2 975 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 FAM173BQ6P4H8 233 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 FAM89AQ96GI7 184 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 SPATA31A3Q5VYP0 1347 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 FSD2A1L4K1 749 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 GADD45BO75293 160 aaPredicted RBP20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 GJB2P29033 226 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 WASHC4Q2M389 1173 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 GPT2Q8TD30 523 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 NFAT5O94916 1531 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 KDM4AO75164 1064 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 CREB3L3Q68CJ9 461 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 CWC25Q9NXE8 425 aaPredicted RBP20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 BTG4Q9NY30 223 aa20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 DBNLQ9UJU6 430 aaKnown RBP20.45■□□□□ 0.86
EPB41L3-204ENST00000540638 MEGF6O75095 1541 aa20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 WDR33Q9C0J8 1336 aaKnown RBP20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 CCDC171Q6TFL3 1326 aa20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 NUTM2BA6NNL0 878 aaPredicted RBP20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 NUTM2EB1AL46 878 aaPredicted RBP20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 ZNF589Q86UQ0 364 aaPredicted RBP20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 NUTM2AQ8IVF1 878 aaPredicted RBP20.44■□□□□ 0.86
EPB41L3-204ENST00000540638 AOX1Q06278 1338 aa20.43■□□□□ 0.86
EPB41L3-204ENST00000540638 GOLGA6L4A6NEF3 574 aa20.43■□□□□ 0.86
EPB41L3-204ENST00000540638 CEBPZQ03701 1054 aaKnown RBP20.43■□□□□ 0.86
EPB41L3-204ENST00000540638 TNNI3KQ59H18 835 aa20.43■□□□□ 0.86
EPB41L3-204ENST00000540638 FPGT-TNNI3KV9GXZ4 949 aa20.43■□□□□ 0.86
EPB41L3-204ENST00000540638 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
EPB41L3-204ENST00000540638 NBPF26B4DH59 902 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 NBPF14Q5TI25 921 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 LARP1BQ659C4 914 aaKnown RBP20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 NBPF10Q6P3W6 841 aaKnown RBP20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 USP48Q86UV5 1035 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 NBPF15Q8N660 670 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 TMEM63CQ9P1W3 806 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 ASAP1Q9ULH1 1129 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 TAF6LQ9Y6J9 622 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 STX6O43752 255 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 CHST3Q7LGC8 479 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 DNAJC10Q8IXB1 793 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 SYT1P21579 422 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 LRRC24Q50LG9 513 aa20.42■□□□□ 0.86
EPB41L3-204ENST00000540638 KDM6AO15550 1401 aaPredicted RBP20.41■□□□□ 0.86
EPB41L3-204ENST00000540638 PTPN12Q05209 780 aaKnown RBP20.41■□□□□ 0.86
EPB41L3-204ENST00000540638 COL9A3Q14050 684 aaPredicted RBP20.41■□□□□ 0.86
EPB41L3-204ENST00000540638 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
EPB41L3-204ENST00000540638 MTX1Q13505 466 aa20.4■□□□□ 0.86
EPB41L3-204ENST00000540638 PUS3Q9BZE2 481 aaKnown RBP20.4■□□□□ 0.86
EPB41L3-204ENST00000540638 HIP1O00291 1037 aa20.4■□□□□ 0.86
EPB41L3-204ENST00000540638 SYNE4Q8N205 404 aa20.4■□□□□ 0.86
EPB41L3-204ENST00000540638 CEP126Q9P2H0 1117 aa20.4■□□□□ 0.86
EPB41L3-204ENST00000540638 TFIP11Q9UBB9 837 aaKnown RBP20.4■□□□□ 0.86
EPB41L3-204ENST00000540638 PCDH11XQ9BZA7 1347 aa20.39■□□□□ 0.86
EPB41L3-204ENST00000540638 PCDH11YQ9BZA8 1340 aa20.39■□□□□ 0.86
EPB41L3-204ENST00000540638 BRD1O95696 1058 aa20.39■□□□□ 0.86
EPB41L3-204ENST00000540638 PSMA5P28066 241 aa20.39■□□□□ 0.86
EPB41L3-204ENST00000540638 RBSNQ9H1K0 784 aa20.39■□□□□ 0.86
EPB41L3-204ENST00000540638 TBC1D2BQ9UPU7 963 aa20.39■□□□□ 0.86
EPB41L3-204ENST00000540638 IFIT1P09914 478 aaKnown RBP20.39■□□□□ 0.85
EPB41L3-204ENST00000540638 MSNP26038 577 aaKnown RBP20.39■□□□□ 0.85
EPB41L3-204ENST00000540638 HAND2P61296 217 aa20.39■□□□□ 0.85
EPB41L3-204ENST00000540638 KIF6Q6ZMV9 814 aa20.39■□□□□ 0.85
EPB41L3-204ENST00000540638 RAB11FIP4Q86YS3 637 aa20.39■□□□□ 0.85
EPB41L3-204ENST00000540638 CHD2O14647 1828 aaKnown RBP20.39■□□□□ 0.85
EPB41L3-204ENST00000540638 SLC27A2O14975 620 aa20.38■□□□□ 0.85
EPB41L3-204ENST00000540638 DNM1Q05193 864 aaKnown RBP20.38■□□□□ 0.85
EPB41L3-204ENST00000540638 SYAP1Q96A49 352 aaPredicted RBP20.38■□□□□ 0.85
EPB41L3-204ENST00000540638 ACSBG1Q96GR2 724 aa20.38■□□□□ 0.85
EPB41L3-204ENST00000540638 ME3Q16798 604 aa20.38■□□□□ 0.85
EPB41L3-204ENST00000540638 STK11IPQ8N1F8 1099 aa20.38■□□□□ 0.85
EPB41L3-204ENST00000540638 H3BQV1 296 aa20.37■□□□□ 0.85
EPB41L3-204ENST00000540638 IFFO2Q5TF58 517 aa20.37■□□□□ 0.85
EPB41L3-204ENST00000540638 MST1RQ04912 1400 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms