RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
MDM2-225ENST00000539479 INTS3Q68E01 1043 aaKnown RBP8□□□□□ -1.13
MDM2-225ENST00000539479 SIRT2Q8IXJ6 389 aa8□□□□□ -1.13
MDM2-225ENST00000539479 GJD4Q96KN9 370 aaPredicted RBP8□□□□□ -1.13
MDM2-225ENST00000539479 KCNK17Q96T54 332 aa8□□□□□ -1.13
MDM2-225ENST00000539479 RGS17Q9UGC6 210 aaPredicted RBP8□□□□□ -1.13
MDM2-225ENST00000539479 CACNA1FO60840 1977 aa8□□□□□ -1.13
MDM2-225ENST00000539479 RREB1Q92766 1687 aa7.99□□□□□ -1.13
MDM2-225ENST00000539479 DDB1Q16531 1140 aa7.99□□□□□ -1.13
MDM2-225ENST00000539479 FAM182BQ5T319 152 aa7.99□□□□□ -1.13
MDM2-225ENST00000539479 PTCD2Q8WV60 388 aaKnown RBP7.99□□□□□ -1.13
MDM2-225ENST00000539479 ACSBG1Q96GR2 724 aa7.99□□□□□ -1.13
MDM2-225ENST00000539479 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
MDM2-225ENST00000539479 PXDNLA1KZ92 1463 aa7.99□□□□□ -1.13
MDM2-225ENST00000539479 PTPRCP08575 1304 aa7.99□□□□□ -1.13
MDM2-225ENST00000539479 BRWD3Q6RI45 1802 aa7.99□□□□□ -1.13
MDM2-225ENST00000539479 NUP188Q5SRE5 1749 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 CANXP27824 592 aaKnown RBP7.98□□□□□ -1.13
MDM2-225ENST00000539479 ITPRIPQ8IWB1 547 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 DNAJC10Q8IXB1 793 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 MEIS3Q99687 375 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 API5Q9BZZ5 524 aaKnown RBP7.98□□□□□ -1.13
MDM2-225ENST00000539479 C1orf115Q9H7X2 142 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 TMOD3Q9NYL9 352 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 CCDC9Q9Y3X0 531 aaKnown RBP7.98□□□□□ -1.13
MDM2-225ENST00000539479 SBF2Q86WG5 1849 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 NHSQ6T4R5 1651 aa7.98□□□□□ -1.13
MDM2-225ENST00000539479 IPO8O15397 1037 aaKnown RBP7.97□□□□□ -1.13
MDM2-225ENST00000539479 PTCD1O75127 700 aaKnown RBP7.97□□□□□ -1.13
MDM2-225ENST00000539479 A1BGP04217 495 aa7.97□□□□□ -1.13
MDM2-225ENST00000539479 SNRPA1P09661 255 aaKnown RBP7.97□□□□□ -1.13
MDM2-225ENST00000539479 ITPK1Q13572 414 aa7.97□□□□□ -1.13
MDM2-225ENST00000539479 BEND3Q5T5X7 828 aa7.97□□□□□ -1.13
MDM2-225ENST00000539479 CCDC136Q96JN2 1154 aa7.97□□□□□ -1.13
MDM2-225ENST00000539479 DDX21Q9NR30 783 aaKnown RBP eCLIP7.97□□□□□ -1.13
MDM2-225ENST00000539479 MYH14Q7Z406 1995 aaKnown RBP7.97□□□□□ -1.13
MDM2-225ENST00000539479 BTAF1O14981 1849 aa7.96□□□□□ -1.13
MDM2-225ENST00000539479 ECM2O94769 699 aaPredicted RBP7.96□□□□□ -1.14
MDM2-225ENST00000539479 IGKV5-2P06315 115 aa7.96□□□□□ -1.14
MDM2-225ENST00000539479 MEX3CQ5U5Q3 659 aaKnown RBP7.96□□□□□ -1.14
MDM2-225ENST00000539479 FTSJ3Q8IY81 847 aaKnown RBP7.96□□□□□ -1.14
MDM2-225ENST00000539479 SEPT12Q8IYM1 358 aa7.96□□□□□ -1.14
MDM2-225ENST00000539479 XAGE3Q8WTP9 111 aa7.96□□□□□ -1.14
MDM2-225ENST00000539479 QTRT2Q9H974 415 aaKnown RBP7.96□□□□□ -1.14
MDM2-225ENST00000539479 DDX19BQ9UMR2 479 aa7.96□□□□□ -1.14
MDM2-225ENST00000539479 ARFGEF2Q9Y6D5 1785 aa7.96□□□□□ -1.14
MDM2-225ENST00000539479 COL5A3P25940 1745 aaPredicted RBP7.95□□□□□ -1.14
MDM2-225ENST00000539479 PI4KAP2A4QPH2 592 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 GOLGA8CPA6NN73 597 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 CYP19A1P11511 503 aaPredicted RBP7.95□□□□□ -1.14
MDM2-225ENST00000539479 FKBP5Q13451 457 aaPredicted RBP7.95□□□□□ -1.14
MDM2-225ENST00000539479 IFFO2Q5TF58 517 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 TTLL7Q6ZT98 887 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 TTC5Q8N0Z6 440 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 PI4KAP1Q8N8J0 262 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 STK31Q9BXU1 1019 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 USP44Q9H0E7 712 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 DBF4Q9UBU7 674 aaPredicted RBP7.95□□□□□ -1.14
MDM2-225ENST00000539479 TRPC5Q9UL62 973 aaPredicted RBP7.95□□□□□ -1.14
MDM2-225ENST00000539479 ZNF831Q5JPB2 1677 aa7.95□□□□□ -1.14
MDM2-225ENST00000539479 MYL6BP14649 208 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 KCNQ4P56696 695 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 INTS5Q6P9B9 1019 aaKnown RBP7.94□□□□□ -1.14
MDM2-225ENST00000539479 POTEAQ6S8J7 498 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 COPS6Q7L5N1 327 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 AMIGO3Q86WK7 504 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 PLPP6Q8IY26 295 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 FBXO41Q8TF61 875 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 DNAAF4Q8WXU2 420 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 KAZALD1Q96I82 304 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 VPS9D1Q9Y2B5 631 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 MAP3K2Q9Y2U5 619 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
MDM2-225ENST00000539479 LY75O60449 1722 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 MS4A1P11836 297 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 PDE4AP27815 886 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 FOXK1P85037 733 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 AIMP1Q12904 312 aaKnown RBP7.93□□□□□ -1.14
MDM2-225ENST00000539479 HDAC1Q13547 482 aaPredicted RBP7.93□□□□□ -1.14
MDM2-225ENST00000539479 CWF19L2Q2TBE0 894 aaKnown RBP7.93□□□□□ -1.14
MDM2-225ENST00000539479 CEP85Q6P2H3 762 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 SLC4A10Q6U841 1118 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 KSR2Q6VAB6 950 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 SMIM5Q71RC9 77 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 CENPQQ7L2Z9 268 aaPredicted RBP7.93□□□□□ -1.14
MDM2-225ENST00000539479 VSIG10Q8N0Z9 540 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 HYPKQ9NX55 129 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 ZBTB1Q9Y2K1 713 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 ERBB4Q15303 1308 aa7.93□□□□□ -1.14
MDM2-225ENST00000539479 LOC102724428A0A0B4J2F2 783 aa7.92□□□□□ -1.14
MDM2-225ENST00000539479 A0A0G2JS52 829 aa7.92□□□□□ -1.14
MDM2-225ENST00000539479 NBPF7P0C2Y1 421 aaPredicted RBP7.92□□□□□ -1.14
MDM2-225ENST00000539479 CCT4P50991 539 aaKnown RBP7.92□□□□□ -1.14
MDM2-225ENST00000539479 CASP7P55210 303 aa7.92□□□□□ -1.14
MDM2-225ENST00000539479 SIK1P57059 783 aa7.92□□□□□ -1.14
MDM2-225ENST00000539479 AAMPQ13685 434 aa7.92□□□□□ -1.14
MDM2-225ENST00000539479 SMC5Q8IY18 1101 aa7.92□□□□□ -1.14
MDM2-225ENST00000539479 ANKRD44Q8N8A2 993 aa7.92□□□□□ -1.14
MDM2-225ENST00000539479 LINC00116Q8NCU8 138 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms