RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 YTHDC2Q9H6S0 1430 aaKnown RBP6.97□□□□□ -1.29
CHD4-206ENST00000536999 SH2B1Q9NRF2 756 aaPredicted RBP6.97□□□□□ -1.29
CHD4-206ENST00000536999 CD2APQ9Y5K6 639 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 COL5A2P05997 1499 aaPredicted RBP6.97□□□□□ -1.29
CHD4-206ENST00000536999 KNDC1Q76NI1 1749 aa6.96□□□□□ -1.29
CHD4-206ENST00000536999 HIP1O00291 1037 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 GNAI2P04899 355 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 CCDC192P0DO97 292 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 PRKAR2BP31323 418 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 NEK4P51957 841 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 DMTNQ08495 405 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 ANKRD1Q15327 319 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 MSL1Q68DK7 614 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 TICAM2Q86XR7 235 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 RTF1Q92541 710 aaKnown RBP6.96□□□□□ -1.3
CHD4-206ENST00000536999 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 PHRF1Q9P1Y6 1649 aaKnown RBP6.96□□□□□ -1.3
CHD4-206ENST00000536999 CCDC171Q6TFL3 1326 aa6.96□□□□□ -1.3
CHD4-206ENST00000536999 A0A1W2PP64 1363 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 KDM4AO75164 1064 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 SDSP20132 328 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 GABPB1Q06547 395 aaPredicted RBP6.95□□□□□ -1.3
CHD4-206ENST00000536999 FKBP5Q13451 457 aaPredicted RBP6.95□□□□□ -1.3
CHD4-206ENST00000536999 SMC1BQ8NDV3 1235 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 ABHD8Q96I13 439 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 GPATCH3Q96I76 525 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 COG3Q96JB2 828 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 TMX3Q96JJ7 454 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 PRAM1Q96QH2 718 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 STK31Q9BXU1 1019 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 PRDM10Q9NQV6 1147 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 LRRC4BQ9NT99 713 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 CGNQ9P2M7 1197 aaKnown RBP6.95□□□□□ -1.3
CHD4-206ENST00000536999 STAP2Q9UGK3 403 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 COL3A1P02461 1466 aaPredicted RBP6.95□□□□□ -1.3
CHD4-206ENST00000536999 IGSF1Q8N6C5 1336 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 RTL1A6NKG5 1358 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 CPDO75976 1380 aa6.95□□□□□ -1.3
CHD4-206ENST00000536999 EDC4Q6P2E9 1401 aaKnown RBP6.94□□□□□ -1.3
CHD4-206ENST00000536999 SYCE3A1L190 88 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 CCDC85CA6NKD9 419 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 EXOC5O00471 708 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 CCP110O43303 1012 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 SLC27A3Q5K4L6 730 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 CEP85Q6P2H3 762 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 AIDAQ96BJ3 306 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 LRRCC1Q9C099 1032 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 SCAND2PQ9GZW5 306 aaPredicted RBP6.94□□□□□ -1.3
CHD4-206ENST00000536999 OGFRQ9NZT2 677 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 LIMCH1Q9UPQ0 1083 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 AKAP12Q02952 1782 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 TTC21BQ7Z4L5 1316 aa6.94□□□□□ -1.3
CHD4-206ENST00000536999 LMO7Q8WWI1 1683 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 COL24A1Q17RW2 1714 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 PPLO60437 1756 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 CHL1O00533 1208 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 CTAGE5O15320 804 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 PSMA5P28066 241 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 PDE1AP54750 535 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 TUBB4BP68371 445 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 ATL3Q6DD88 541 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 GPT2Q8TD30 523 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 TM6SF1Q9BZW5 370 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 GGNBP2Q9H3C7 697 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 CABP2Q9NPB3 220 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 MBIPQ9NS73 344 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 POLKQ9UBT6 870 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 SSUH2Q9Y2M2 353 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 ELP1O95163 1332 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 PDE4DIPQ5VU43 2346 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 ANKRD26Q9UPS8 1709 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 USP6P35125 1406 aa6.93□□□□□ -1.3
CHD4-206ENST00000536999 GOLGA6L4A6NEF3 574 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 FOXN1O15353 648 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 TPM1P09493 284 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 GSPT1P15170 499 aaKnown RBP6.92□□□□□ -1.3
CHD4-206ENST00000536999 ZKSCAN1P17029 563 aaPredicted RBP6.92□□□□□ -1.3
CHD4-206ENST00000536999 IL13P35225 146 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 CTCFP49711 727 aaPredicted RBP6.92□□□□□ -1.3
CHD4-206ENST00000536999 CCDC30Q5VVM6 783 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 SIRT2Q8IXJ6 389 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 CNTROBQ8N137 903 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 ABTB2Q8N961 1025 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 DDX19AQ9NUU7 478 aaKnown RBP6.92□□□□□ -1.3
CHD4-206ENST00000536999 TMEM63CQ9P1W3 806 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 SMC3Q9UQE7 1217 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 PRR36Q9H6K5 1346 aa6.92□□□□□ -1.3
CHD4-206ENST00000536999 NHSQ6T4R5 1651 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 QSER1Q2KHR3 1735 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 SMTNL1A8MU46 457 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 ADCY5O95622 1261 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 GCP02774 474 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 CSB-PGBD3P0DP91 1061 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 ZSCAN22P10073 491 aaPredicted RBP6.91□□□□□ -1.3
CHD4-206ENST00000536999 KRT85P78386 507 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 ERC1Q8IUD2 1116 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 REM2Q8IYK8 340 aaPredicted RBP6.91□□□□□ -1.3
CHD4-206ENST00000536999 FAM200AQ8TCP9 573 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 CDK19Q9BWU1 502 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms