RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 CWC25Q9NXE8 425 aaPredicted RBP17.33■□□□□ 0.36
EIF3F-202ENST00000528653 NTSR2O95665 410 aa17.32■□□□□ 0.36
EIF3F-202ENST00000528653 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
EIF3F-202ENST00000528653 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
EIF3F-202ENST00000528653 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.32■□□□□ 0.36
EIF3F-202ENST00000528653 ABCC12Q96J65 1359 aa17.31■□□□□ 0.36
EIF3F-202ENST00000528653 NPHP1O15259 732 aa17.31■□□□□ 0.36
EIF3F-202ENST00000528653 CENPBP07199 599 aaPredicted RBP17.31■□□□□ 0.36
EIF3F-202ENST00000528653 RLBP1P12271 317 aa17.31■□□□□ 0.36
EIF3F-202ENST00000528653 DZIP1LQ8IYY4 767 aaKnown RBP17.31■□□□□ 0.36
EIF3F-202ENST00000528653 CNBD1Q8NA66 436 aa17.31■□□□□ 0.36
EIF3F-202ENST00000528653 CCDC191Q8NCU4 936 aa17.31■□□□□ 0.36
EIF3F-202ENST00000528653 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
EIF3F-202ENST00000528653 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 LAMB2P55268 1798 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
EIF3F-202ENST00000528653 ALDH1L1O75891 902 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
EIF3F-202ENST00000528653 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 PPP1R42Q7Z4L9 355 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 PANK1Q8TE04 598 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 NYXQ9GZU5 481 aa17.3■□□□□ 0.36
EIF3F-202ENST00000528653 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
EIF3F-202ENST00000528653 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
EIF3F-202ENST00000528653 GCKRQ14397 625 aa17.29■□□□□ 0.36
EIF3F-202ENST00000528653 RTL5Q5HYW3 569 aaPredicted RBP17.29■□□□□ 0.36
EIF3F-202ENST00000528653 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
EIF3F-202ENST00000528653 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
EIF3F-202ENST00000528653 DDX60Q8IY21 1712 aaKnown RBP17.29■□□□□ 0.36
EIF3F-202ENST00000528653 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
EIF3F-202ENST00000528653 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
EIF3F-202ENST00000528653 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
EIF3F-202ENST00000528653 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
EIF3F-202ENST00000528653 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
EIF3F-202ENST00000528653 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
EIF3F-202ENST00000528653 PPP1R1BQ9UD71 204 aaPredicted RBP17.28■□□□□ 0.36
EIF3F-202ENST00000528653 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
EIF3F-202ENST00000528653 KIF13BQ9NQT8 1826 aa17.28■□□□□ 0.36
EIF3F-202ENST00000528653 PCCAP05165 728 aaPredicted RBP17.27■□□□□ 0.36
EIF3F-202ENST00000528653 MS4A1P11836 297 aa17.27■□□□□ 0.36
EIF3F-202ENST00000528653 ST5P78524 1137 aa17.27■□□□□ 0.36
EIF3F-202ENST00000528653 C20orf194Q5TEA3 1177 aa17.27■□□□□ 0.36
EIF3F-202ENST00000528653 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.36
EIF3F-202ENST00000528653 SYNE4Q8N205 404 aa17.27■□□□□ 0.36
EIF3F-202ENST00000528653 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
EIF3F-202ENST00000528653 FAM89AQ96GI7 184 aa17.27■□□□□ 0.36
EIF3F-202ENST00000528653 GRM8O00222 908 aa17.26■□□□□ 0.35
EIF3F-202ENST00000528653 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
EIF3F-202ENST00000528653 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
EIF3F-202ENST00000528653 COL11A2P13942 1736 aaPredicted RBP17.26■□□□□ 0.35
EIF3F-202ENST00000528653 UTRNP46939 3433 aa17.25■□□□□ 0.35
EIF3F-202ENST00000528653 RIC1Q4ADV7 1423 aa17.25■□□□□ 0.35
EIF3F-202ENST00000528653 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
EIF3F-202ENST00000528653 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
EIF3F-202ENST00000528653 H7C1W4 665 aa17.24■□□□□ 0.35
EIF3F-202ENST00000528653 IRS4O14654 1257 aaPredicted RBP17.24■□□□□ 0.35
EIF3F-202ENST00000528653 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
EIF3F-202ENST00000528653 COG6Q9Y2V7 657 aa17.24■□□□□ 0.35
EIF3F-202ENST00000528653 KIAA1551Q9HCM1 1747 aa17.24■□□□□ 0.35
EIF3F-202ENST00000528653 CDHR2Q9BYE9 1310 aa17.23■□□□□ 0.35
EIF3F-202ENST00000528653 MYH3P11055 1940 aa17.23■□□□□ 0.35
EIF3F-202ENST00000528653 CASP7P55210 303 aa17.23■□□□□ 0.35
EIF3F-202ENST00000528653 MEIS3Q99687 375 aa17.23■□□□□ 0.35
EIF3F-202ENST00000528653 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
EIF3F-202ENST00000528653 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
EIF3F-202ENST00000528653 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
EIF3F-202ENST00000528653 BRIP1Q9BX63 1249 aa17.22■□□□□ 0.35
EIF3F-202ENST00000528653 USP44Q9H0E7 712 aa17.22■□□□□ 0.35
EIF3F-202ENST00000528653 UTYO14607 1347 aa17.21■□□□□ 0.35
EIF3F-202ENST00000528653 UBTFL1P0CB47 393 aaPredicted RBP17.21■□□□□ 0.35
EIF3F-202ENST00000528653 SLC10A5Q5PT55 438 aa17.21■□□□□ 0.35
EIF3F-202ENST00000528653 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
EIF3F-202ENST00000528653 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
EIF3F-202ENST00000528653 FHDC1Q9C0D6 1143 aaPredicted RBP17.2■□□□□ 0.34
EIF3F-202ENST00000528653 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
EIF3F-202ENST00000528653 PDE6BP35913 854 aa17.19■□□□□ 0.34
EIF3F-202ENST00000528653 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
EIF3F-202ENST00000528653 CD2APQ9Y5K6 639 aa17.19■□□□□ 0.34
EIF3F-202ENST00000528653 PDE8AO60658 829 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 GNAI3P08754 354 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 CHRNA5P30532 468 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 CTSWP56202 376 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
EIF3F-202ENST00000528653 YY1P25490 414 aa17.17■□□□□ 0.34
EIF3F-202ENST00000528653 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
EIF3F-202ENST00000528653 CACNA1SQ13698 1873 aa17.17■□□□□ 0.34
EIF3F-202ENST00000528653 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
EIF3F-202ENST00000528653 NLGN2Q8NFZ4 835 aa17.17■□□□□ 0.34
EIF3F-202ENST00000528653 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
EIF3F-202ENST00000528653 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
EIF3F-202ENST00000528653 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
EIF3F-202ENST00000528653 KLRG2A4D1S0 409 aaPredicted RBP17.16■□□□□ 0.34
EIF3F-202ENST00000528653 ZBTB7BO15156 539 aaPredicted RBP17.16■□□□□ 0.34
EIF3F-202ENST00000528653 DPEP1P16444 411 aa17.16■□□□□ 0.34
EIF3F-202ENST00000528653 FOXO4P98177 505 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms