RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 CCDC69A6NI79 296 aa17.63■□□□□ 0.41
ATM-212ENST00000527805 PREX1Q8TCU6 1659 aa17.63■□□□□ 0.41
ATM-212ENST00000527805 APBA3O96018 575 aa17.63■□□□□ 0.41
ATM-212ENST00000527805 SDSP20132 328 aa17.63■□□□□ 0.41
ATM-212ENST00000527805 TPM4P67936 248 aa17.63■□□□□ 0.41
ATM-212ENST00000527805 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
ATM-212ENST00000527805 BRMS1Q9HCU9 246 aa17.63■□□□□ 0.41
ATM-212ENST00000527805 DEKP35659 375 aaKnown RBP17.63■□□□□ 0.41
ATM-212ENST00000527805 RIMS1Q86UR5 1692 aaKnown RBP17.62■□□□□ 0.41
ATM-212ENST00000527805 FAM182BQ5T319 152 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 QRICH2Q9H0J4 1663 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 ATP2B1P20020 1258 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 GCKRQ14397 625 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 CREBRFQ8IUR6 639 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 UNC5CLQ8IV45 518 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 CDC42BPGQ6DT37 1551 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
ATM-212ENST00000527805 TNS3Q68CZ2 1445 aa17.61■□□□□ 0.41
ATM-212ENST00000527805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
ATM-212ENST00000527805 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
ATM-212ENST00000527805 TFCP2Q12800 502 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 NSFL1CQ9UNZ2 370 aaKnown RBP17.6■□□□□ 0.41
ATM-212ENST00000527805 TCEAL9Q9UHQ7 104 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 CEP170BQ9Y4F5 1589 aaPredicted RBP17.6■□□□□ 0.41
ATM-212ENST00000527805 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 LOC102724428A0A0B4J2F2 783 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 SIK1P57059 783 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 TRIM22Q8IYM9 498 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
ATM-212ENST00000527805 TTLL7Q6ZT98 887 aa17.59■□□□□ 0.41
ATM-212ENST00000527805 KLHDC4Q8TBB5 520 aa17.59■□□□□ 0.41
ATM-212ENST00000527805 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
ATM-212ENST00000527805 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
ATM-212ENST00000527805 PTPRUQ92729 1446 aa17.59■□□□□ 0.41
ATM-212ENST00000527805 USP31Q70CQ4 1352 aa17.59■□□□□ 0.41
ATM-212ENST00000527805 VWDEQ8N2E2 1590 aa17.59■□□□□ 0.41
ATM-212ENST00000527805 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
ATM-212ENST00000527805 SUCLG2Q96I99 432 aa17.59■□□□□ 0.41
ATM-212ENST00000527805 ZNF213O14771 459 aa17.58■□□□□ 0.41
ATM-212ENST00000527805 ZSCAN31Q96LW9 406 aaPredicted RBP17.58■□□□□ 0.41
ATM-212ENST00000527805 WWC3Q9ULE0 1092 aa17.58■□□□□ 0.4
ATM-212ENST00000527805 LDHCP07864 332 aa17.58■□□□□ 0.4
ATM-212ENST00000527805 SLF2Q8IX21 1173 aa17.58■□□□□ 0.4
ATM-212ENST00000527805 MKNK2Q9HBH9 465 aa17.58■□□□□ 0.4
ATM-212ENST00000527805 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
ATM-212ENST00000527805 ITGA6P23229 1130 aa17.57■□□□□ 0.4
ATM-212ENST00000527805 TCIRG1Q13488 830 aa17.57■□□□□ 0.4
ATM-212ENST00000527805 CYP27B1O15528 508 aa17.57■□□□□ 0.4
ATM-212ENST00000527805 CWC22Q9HCG8 908 aaKnown RBP17.57■□□□□ 0.4
ATM-212ENST00000527805 CCDC24Q8N4L8 307 aa17.57■□□□□ 0.4
ATM-212ENST00000527805 EYA2O00167 538 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 PDE8AO60658 829 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 ZNF853P0CG23 659 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 LARP1BQ659C4 914 aaKnown RBP17.56■□□□□ 0.4
ATM-212ENST00000527805 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
ATM-212ENST00000527805 CCDC73Q6ZRK6 1079 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 PNMA6EA0A0J9YXQ4 647 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 PROSER3Q2NL68 480 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
ATM-212ENST00000527805 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
ATM-212ENST00000527805 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
ATM-212ENST00000527805 KDM4FA0A1W2PPD8 638 aa17.55■□□□□ 0.4
ATM-212ENST00000527805 ZNF594Q96JF6 807 aaPredicted RBP17.55■□□□□ 0.4
ATM-212ENST00000527805 USP44Q9H0E7 712 aa17.55■□□□□ 0.4
ATM-212ENST00000527805 TIMM10P62072 90 aa17.55■□□□□ 0.4
ATM-212ENST00000527805 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
ATM-212ENST00000527805 CERKQ8TCT0 537 aa17.55■□□□□ 0.4
ATM-212ENST00000527805 BECN2A8MW95 431 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 NFKBIBQ15653 356 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 PLEKHM2Q8IWE5 1019 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 ZC3H12CQ9C0D7 883 aaKnown RBP17.54■□□□□ 0.4
ATM-212ENST00000527805 POLD1P28340 1107 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 HAND2P61296 217 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 ABCC4O15439 1325 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 BAG3O95817 575 aa17.54■□□□□ 0.4
ATM-212ENST00000527805 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
ATM-212ENST00000527805 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
ATM-212ENST00000527805 THRAP3Q9Y2W1 955 aaKnown RBP17.54■□□□□ 0.4
ATM-212ENST00000527805 SLC9C2Q5TAH2 1124 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 PIGBQ92521 554 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 FIBPO43427 364 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 PAG1Q9NWQ8 432 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
ATM-212ENST00000527805 RXRBP28702 533 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 CEBPZQ03701 1054 aaKnown RBP17.53■□□□□ 0.4
ATM-212ENST00000527805 CDKL5O76039 1030 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 TRIM37O94972 964 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 CYP7A1P22680 504 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 TPD52L1Q16890 204 aaPredicted RBP17.53■□□□□ 0.4
ATM-212ENST00000527805 SEPT12Q8IYM1 358 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 DDX11Q96FC9 970 aa17.53■□□□□ 0.4
ATM-212ENST00000527805 ZBTB1Q9Y2K1 713 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms