RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 LBX1P52954 281 aa7.72□□□□□ -1.17
PABPC1-223ENST00000523636 PMFBP1Q8TBY8 1022 aa7.72□□□□□ -1.17
PABPC1-223ENST00000523636 KNDC1Q76NI1 1749 aa7.72□□□□□ -1.17
PABPC1-223ENST00000523636 PTPRNQ16849 979 aa7.71□□□□□ -1.18
PABPC1-223ENST00000523636 CLUAP1Q96AJ1 413 aa7.71□□□□□ -1.18
PABPC1-223ENST00000523636 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.18
PABPC1-223ENST00000523636 KCPQ6ZWJ8 1503 aa7.71□□□□□ -1.18
PABPC1-223ENST00000523636 TNRC6CQ9HCJ0 1690 aaKnown RBP7.7□□□□□ -1.18
PABPC1-223ENST00000523636 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
PABPC1-223ENST00000523636 MMP16P51512 607 aa7.7□□□□□ -1.18
PABPC1-223ENST00000523636 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-223ENST00000523636 LRRN4Q8WUT4 740 aa7.7□□□□□ -1.18
PABPC1-223ENST00000523636 POM121Q96HA1 1249 aa7.7□□□□□ -1.18
PABPC1-223ENST00000523636 HMX1Q9NP08 348 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-223ENST00000523636 THRAP3Q9Y2W1 955 aaKnown RBP7.7□□□□□ -1.18
PABPC1-223ENST00000523636 RANBP2P49792 3224 aaKnown RBP7.69□□□□□ -1.18
PABPC1-223ENST00000523636 COL5A2P05997 1499 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-223ENST00000523636 PER1O15534 1290 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-223ENST00000523636 TRAK2O60296 914 aa7.69□□□□□ -1.18
PABPC1-223ENST00000523636 ZC3H6P61129 1189 aaKnown RBP7.69□□□□□ -1.18
PABPC1-223ENST00000523636 ZNF326Q5BKZ1 582 aaKnown RBP7.69□□□□□ -1.18
PABPC1-223ENST00000523636 WWC1Q8IX03 1113 aa7.69□□□□□ -1.18
PABPC1-223ENST00000523636 TRIM34Q9BYJ4 488 aa7.69□□□□□ -1.18
PABPC1-223ENST00000523636 CD2APQ9Y5K6 639 aa7.69□□□□□ -1.18
PABPC1-223ENST00000523636 IGSF1Q8N6C5 1336 aa7.69□□□□□ -1.18
PABPC1-223ENST00000523636 ITGBL1O95965 494 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-223ENST00000523636 HSPA8P11142 646 aaKnown RBP7.68□□□□□ -1.18
PABPC1-223ENST00000523636 CTCFP49711 727 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-223ENST00000523636 CHIC2Q9UKJ5 165 aa7.68□□□□□ -1.18
PABPC1-223ENST00000523636 TLL1O43897 1013 aa7.67□□□□□ -1.18
PABPC1-223ENST00000523636 F12P00748 615 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-223ENST00000523636 PNMA1Q8ND90 353 aa7.67□□□□□ -1.18
PABPC1-223ENST00000523636 ZNF516Q92618 1163 aa7.67□□□□□ -1.18
PABPC1-223ENST00000523636 GDPD2Q9HCC8 539 aa7.67□□□□□ -1.18
PABPC1-223ENST00000523636 MKRN1Q9UHC7 482 aaKnown RBP7.67□□□□□ -1.18
PABPC1-223ENST00000523636 PPLO60437 1756 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 SBF1O95248 1867 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 BRCA1P38398 1863 aaKnown RBP7.66□□□□□ -1.18
PABPC1-223ENST00000523636 DLL1O00548 723 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 CCNYL3P0C7X3 344 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 DDB1Q16531 1140 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 MSL1Q68DK7 614 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 C16orf71Q8IYS4 520 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-223ENST00000523636 SMC1BQ8NDV3 1235 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 SLC6A16Q9GZN6 736 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 RRAGCQ9HB90 399 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 TBC1D2BQ9UPU7 963 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 ANKRD30AQ9BXX3 1397 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 N4BP2Q86UW6 1770 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-223ENST00000523636 KAT6BQ8WYB5 2073 aa7.66□□□□□ -1.18
PABPC1-223ENST00000523636 PIK3C2AO00443 1686 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 KCNQ4P56696 695 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 EVA1CP58658 441 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 CRB1P82279 1406 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 KCNC4Q03721 635 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 NR6A1Q15406 480 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 TRPM1Q7Z4N2 1603 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 NUDT12Q9BQG2 462 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 EVA1BQ9NVM1 165 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 ACIN1Q9UKV3 1341 aaKnown RBP7.65□□□□□ -1.18
PABPC1-223ENST00000523636 ANKRD50Q9ULJ7 1429 aa7.65□□□□□ -1.18
PABPC1-223ENST00000523636 KIF1BO60333 1816 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 USP54Q70EL1 1684 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 ZC3H4Q9UPT8 1303 aaKnown RBP7.64□□□□□ -1.19
PABPC1-223ENST00000523636 GPR37L1O60883 481 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 ABL2P42684 1182 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 COL23A1Q86Y22 540 aaPredicted RBP7.64□□□□□ -1.19
PABPC1-223ENST00000523636 PRDM9Q9NQV7 894 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 KIF13BQ9NQT8 1826 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 COL18A1P39060 1754 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 LY75O60449 1722 aa7.64□□□□□ -1.19
PABPC1-223ENST00000523636 BRD4O60885 1362 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-223ENST00000523636 CNTNAP1P78357 1384 aa7.63□□□□□ -1.19
PABPC1-223ENST00000523636 ABCC11Q96J66 1382 aa7.63□□□□□ -1.19
PABPC1-223ENST00000523636 KCNH2Q12809 1159 aa7.63□□□□□ -1.19
PABPC1-223ENST00000523636 WASHC4Q2M389 1173 aa7.63□□□□□ -1.19
PABPC1-223ENST00000523636 EPS8L1Q8TE68 723 aa7.63□□□□□ -1.19
PABPC1-223ENST00000523636 MUC3AQ02505 3323 aa7.63□□□□□ -1.19
PABPC1-223ENST00000523636 LAMA3Q16787 3333 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 CPDO75976 1380 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 PRR36Q9H6K5 1346 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 IRF5Q13568 498 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 ARMC2Q8NEN0 867 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 GPKOWQ92917 476 aaPredicted RBP eCLIP7.62□□□□□ -1.19
PABPC1-223ENST00000523636 ACSBG1Q96GR2 724 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 STK26Q9P289 416 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 ZNF330Q9Y3S2 320 aaPredicted RBP7.62□□□□□ -1.19
PABPC1-223ENST00000523636 ADAMTS7Q9UKP4 1686 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 CENPFP49454 3210 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 CASP8AP2Q9UKL3 1982 aa7.62□□□□□ -1.19
PABPC1-223ENST00000523636 PITPNM2Q9BZ72 1349 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 CDK11BP21127 795 aaKnown RBP7.61□□□□□ -1.19
PABPC1-223ENST00000523636 NKX2-3Q8TAU0 364 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 MAP10Q9P2G4 905 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 FKBPLQ9UIM3 349 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 ARFGEF1Q9Y6D6 1849 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 TOGARAM1Q9Y4F4 1720 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 USP6P35125 1406 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 ANKARQ7Z5J8 1434 aa7.61□□□□□ -1.19
PABPC1-223ENST00000523636 IGSF3O75054 1194 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms