RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 TRIM44Q96DX7 344 aaPredicted RBP4.66□□□□□ -1.66
HDAC2-215ENST00000523334 TBC1D2BQ9UPU7 963 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 PXDNLA1KZ92 1463 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 APPP05067 770 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 CASTP20810 708 aaKnown RBP4.66□□□□□ -1.66
HDAC2-215ENST00000523334 TFCP2Q12800 502 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 TCIRG1Q13488 830 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 KRT32Q14532 448 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 MCTP1Q6DN14 999 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 EAF2Q96CJ1 260 aaPredicted RBP4.66□□□□□ -1.66
HDAC2-215ENST00000523334 COPRSQ9NQ92 184 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 EYA2O00167 538 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 SGSM2O43147 1006 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 ANKRD1Q15327 319 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 CSPP1Q1MSJ5 1256 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 FAM89AQ96GI7 184 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.66□□□□□ -1.66
HDAC2-215ENST00000523334 PDRG1Q9NUG6 133 aa4.66□□□□□ -1.66
HDAC2-215ENST00000523334 MEGF6O75095 1541 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 GOLIM4O00461 696 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 TRDNQ13061 729 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 VPS37DQ86XT2 251 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 FAM184AQ8NB25 1140 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 PIGBQ92521 554 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 TNPO1Q92973 898 aaKnown RBP4.65□□□□□ -1.66
HDAC2-215ENST00000523334 ZSCAN31Q96LW9 406 aaPredicted RBP4.65□□□□□ -1.66
HDAC2-215ENST00000523334 VPS37CA5D8V6 355 aaPredicted RBP4.65□□□□□ -1.66
HDAC2-215ENST00000523334 EPB41L2O43491 1005 aaKnown RBP4.65□□□□□ -1.66
HDAC2-215ENST00000523334 IGHMBP2P38935 993 aaKnown RBP4.65□□□□□ -1.66
HDAC2-215ENST00000523334 TNNI3KQ59H18 835 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 DDX46Q7L014 1031 aaKnown RBP4.65□□□□□ -1.66
HDAC2-215ENST00000523334 RALYLQ86SE5 291 aaKnown RBP4.65□□□□□ -1.66
HDAC2-215ENST00000523334 VSIG10Q8N0Z9 540 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 TMX3Q96JJ7 454 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 FPGT-TNNI3KV9GXZ4 949 aa4.65□□□□□ -1.66
HDAC2-215ENST00000523334 SLIT3O75094 1523 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 PDCP20941 246 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 SSFA2P28290 1259 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 DBNDD2Q9BQY9 259 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 TOMM22Q9NS69 142 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 TAOK2Q9UL54 1235 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 LIMCH1Q9UPQ0 1083 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 RAD50Q92878 1312 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 WDR33Q9C0J8 1336 aaKnown RBP4.65□□□□□ -1.67
HDAC2-215ENST00000523334 IRS4O14654 1257 aaPredicted RBP4.65□□□□□ -1.67
HDAC2-215ENST00000523334 NMIQ13287 307 aaPredicted RBP4.65□□□□□ -1.67
HDAC2-215ENST00000523334 ZSCAN25Q6NSZ9 544 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 UNC5CLQ8IV45 518 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 SNRKQ9NRH2 765 aa4.65□□□□□ -1.67
HDAC2-215ENST00000523334 RBM8AQ9Y5S9 174 aaKnown RBP4.65□□□□□ -1.67
HDAC2-215ENST00000523334 NBPF26B4DH59 902 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 H3BQV1 296 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 TIMM10P62072 90 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 PDIA6Q15084 440 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 NKX1-1Q15270 411 aaPredicted RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 ATP2B3Q16720 1220 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 IFFO2Q5TF58 517 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 NBPF14Q5TI25 921 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 NBPF10Q6P3W6 841 aaKnown RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 NBPF15Q8N660 670 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 CTNNA3Q9UI47 895 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 U3KPZ7 1027 aaPredicted RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 KDM6AO15550 1401 aaPredicted RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 GIGYF2Q6Y7W6 1299 aaKnown RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 BICDL1Q6ZP65 573 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 SH2B1Q9NRF2 756 aaPredicted RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 HMG20BQ9P0W2 317 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 NWD1Q149M9 1564 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 CCDC171Q6TFL3 1326 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 IDH1O75874 414 aaKnown RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 SASH1O94885 1247 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 PCCAP05165 728 aaPredicted RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 ATP5JP18859 108 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 FAM98CQ17RN3 349 aaKnown RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 EPHA10Q5JZY3 1008 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 CPLX2Q6PUV4 134 aaKnown RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 ZNF594Q96JF6 807 aaPredicted RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 CCDC87Q9NVE4 849 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 GNL3LQ9NVN8 582 aaKnown RBP4.64□□□□□ -1.67
HDAC2-215ENST00000523334 LTN1O94822 1766 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 PLEKHG2Q9H7P9 1386 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 MAP3K15Q6ZN16 1313 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 SH3TC1Q8TE82 1336 aa4.64□□□□□ -1.67
HDAC2-215ENST00000523334 A0A1B0GUL7 405 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 H7C1W4 665 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 ZPR1O75312 459 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 PRPF40AO75400 957 aaKnown RBP4.63□□□□□ -1.67
HDAC2-215ENST00000523334 MBD3O95983 291 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 PI4K2BQ8TCG2 481 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 NIP7Q9Y221 180 aaKnown RBP eCLIP4.63□□□□□ -1.67
HDAC2-215ENST00000523334 ZBTB1Q9Y2K1 713 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 CPLX1O14810 134 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 PHF14O94880 888 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 HSPA4P34932 840 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 PTPN12Q05209 780 aaKnown RBP4.63□□□□□ -1.67
HDAC2-215ENST00000523334 MCMDC2Q4G0Z9 681 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 UTP14AQ9BVJ6 771 aaKnown RBP4.63□□□□□ -1.67
HDAC2-215ENST00000523334 ATG3Q9NT62 314 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 PAG1Q9NWQ8 432 aa4.63□□□□□ -1.67
HDAC2-215ENST00000523334 ZFYP08048 801 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms