RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 SGSM2O43147 1006 aa31.47■■■□□ 2.63
COL13A1-214ENST00000522165 TCIRG1Q13488 830 aa31.47■■■□□ 2.63
COL13A1-214ENST00000522165 SYTL4Q96C24 671 aaPredicted RBP31.47■■■□□ 2.63
COL13A1-214ENST00000522165 TLR7Q9NYK1 1049 aaKnown RBP31.47■■■□□ 2.63
COL13A1-214ENST00000522165 ZNF330Q9Y3S2 320 aaPredicted RBP31.47■■■□□ 2.63
COL13A1-214ENST00000522165 KAT6BQ8WYB5 2073 aa31.47■■■□□ 2.63
COL13A1-214ENST00000522165 PRIM1P49642 420 aaKnown RBP31.46■■■□□ 2.63
COL13A1-214ENST00000522165 DDB1Q16531 1140 aa31.46■■■□□ 2.63
COL13A1-214ENST00000522165 KIF6Q6ZMV9 814 aa31.46■■■□□ 2.63
COL13A1-214ENST00000522165 DOT1LQ8TEK3 1739 aa31.46■■■□□ 2.63
COL13A1-214ENST00000522165 SPATA31A5Q5VU36 1347 aa31.46■■■□□ 2.63
COL13A1-214ENST00000522165 SPATA31A7Q8IWB4 1347 aa31.46■■■□□ 2.63
COL13A1-214ENST00000522165 ST18O60284 1047 aa31.45■■■□□ 2.63
COL13A1-214ENST00000522165 ANAPC15P60006 121 aa31.45■■■□□ 2.63
COL13A1-214ENST00000522165 HSP90AA1P07900 732 aaKnown RBP31.45■■■□□ 2.62
COL13A1-214ENST00000522165 CYP19A1P11511 503 aaPredicted RBP31.45■■■□□ 2.62
COL13A1-214ENST00000522165 EVI5LQ96CN4 794 aa31.45■■■□□ 2.62
COL13A1-214ENST00000522165 CIZ1Q9ULV3 898 aaPredicted RBP31.45■■■□□ 2.62
COL13A1-214ENST00000522165 NWD2Q9ULI1 1742 aa31.45■■■□□ 2.62
COL13A1-214ENST00000522165 TRIM28Q13263 835 aaKnown RBP31.44■■■□□ 2.62
COL13A1-214ENST00000522165 IL17RAQ96F46 866 aa31.44■■■□□ 2.62
COL13A1-214ENST00000522165 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.44■■■□□ 2.62
COL13A1-214ENST00000522165 SLIT2O94813 1529 aa31.44■■■□□ 2.62
COL13A1-214ENST00000522165 DEKP35659 375 aaKnown RBP31.44■■■□□ 2.62
COL13A1-214ENST00000522165 TFCP2Q12800 502 aa31.43■■■□□ 2.62
COL13A1-214ENST00000522165 PALD1Q9ULE6 856 aa31.43■■■□□ 2.62
COL13A1-214ENST00000522165 CHMP3Q9Y3E7 222 aa31.42■■■□□ 2.62
COL13A1-214ENST00000522165 MAP3K15Q6ZN16 1313 aa31.41■■■□□ 2.62
COL13A1-214ENST00000522165 TNNI3KQ59H18 835 aa31.41■■■□□ 2.62
COL13A1-214ENST00000522165 DIAPH3Q9NSV4 1193 aa31.41■■■□□ 2.62
COL13A1-214ENST00000522165 FPGT-TNNI3KV9GXZ4 949 aa31.41■■■□□ 2.62
COL13A1-214ENST00000522165 CWC27Q6UX04 472 aaKnown RBP31.4■■■□□ 2.62
COL13A1-214ENST00000522165 RAD50Q92878 1312 aa31.4■■■□□ 2.62
COL13A1-214ENST00000522165 BARGINQ6ZT62 677 aa31.39■■■□□ 2.62
COL13A1-214ENST00000522165 HSPA4P34932 840 aa31.39■■■□□ 2.62
COL13A1-214ENST00000522165 RUFY2Q8WXA3 655 aa31.39■■■□□ 2.62
COL13A1-214ENST00000522165 LSG1Q9H089 658 aaKnown RBP31.39■■■□□ 2.62
COL13A1-214ENST00000522165 FOXD4L1Q9NU39 408 aa31.39■■■□□ 2.62
COL13A1-214ENST00000522165 GIGYF2Q6Y7W6 1299 aaKnown RBP31.38■■■□□ 2.61
COL13A1-214ENST00000522165 MARCH10Q8NA82 808 aaPredicted RBP31.38■■■□□ 2.61
COL13A1-214ENST00000522165 DBNLQ9UJU6 430 aaKnown RBP31.38■■■□□ 2.61
COL13A1-214ENST00000522165 BOLA2Q9H3K6 86 aa31.37■■■□□ 2.61
COL13A1-214ENST00000522165 ZBTB1Q9Y2K1 713 aa31.37■■■□□ 2.61
COL13A1-214ENST00000522165 NEK4P51957 841 aa31.36■■■□□ 2.61
COL13A1-214ENST00000522165 PCCAP05165 728 aaPredicted RBP31.36■■■□□ 2.61
COL13A1-214ENST00000522165 ATG9AQ7Z3C6 839 aa31.36■■■□□ 2.61
COL13A1-214ENST00000522165 CCDC9Q9Y3X0 531 aaKnown RBP31.36■■■□□ 2.61
COL13A1-214ENST00000522165 KIAA1211Q6ZU35 1233 aa31.35■■■□□ 2.61
COL13A1-214ENST00000522165 ARXQ96QS3 562 aa31.35■■■□□ 2.61
COL13A1-214ENST00000522165 HIP1O00291 1037 aa31.34■■■□□ 2.61
COL13A1-214ENST00000522165 ATP5JP18859 108 aa31.34■■■□□ 2.61
COL13A1-214ENST00000522165 HLFQ16534 295 aa31.34■■■□□ 2.61
COL13A1-214ENST00000522165 UBAP1LF5GYI3 381 aa31.33■■■□□ 2.61
COL13A1-214ENST00000522165 HSP90AB3PQ58FF7 597 aa31.33■■■□□ 2.61
COL13A1-214ENST00000522165 ZBTB38Q8NAP3 1195 aaPredicted RBP31.33■■■□□ 2.61
COL13A1-214ENST00000522165 PLA2G12BQ9BX93 195 aa31.33■■■□□ 2.61
COL13A1-214ENST00000522165 MCM4P33991 863 aa31.32■■■□□ 2.6
COL13A1-214ENST00000522165 IL15P40933 162 aaPredicted RBP31.32■■■□□ 2.6
COL13A1-214ENST00000522165 RAB3GAP1Q15042 981 aa31.32■■■□□ 2.6
COL13A1-214ENST00000522165 ACSBG1Q96GR2 724 aa31.32■■■□□ 2.6
COL13A1-214ENST00000522165 IL6STP40189 918 aaPredicted RBP31.31■■■□□ 2.6
COL13A1-214ENST00000522165 EYA2O00167 538 aa31.31■■■□□ 2.6
COL13A1-214ENST00000522165 MCM2P49736 904 aa31.31■■■□□ 2.6
COL13A1-214ENST00000522165 FAM89AQ96GI7 184 aa31.31■■■□□ 2.6
COL13A1-214ENST00000522165 DBNDD2Q9BQY9 259 aa31.31■■■□□ 2.6
COL13A1-214ENST00000522165 GPR108Q9NPR9 543 aa31.31■■■□□ 2.6
COL13A1-214ENST00000522165 CIAO1O76071 339 aa31.29■■■□□ 2.6
COL13A1-214ENST00000522165 NLRP10Q86W26 655 aa31.29■■■□□ 2.6
COL13A1-214ENST00000522165 ZNF594Q96JF6 807 aaPredicted RBP31.29■■■□□ 2.6
COL13A1-214ENST00000522165 FSD1Q9BTV5 496 aa31.29■■■□□ 2.6
COL13A1-214ENST00000522165 ANKRD36CQ5JPF3 1778 aa31.28■■■□□ 2.6
COL13A1-214ENST00000522165 IL27Q8NEV9 243 aa31.28■■■□□ 2.6
COL13A1-214ENST00000522165 A0A0G2JS52 829 aa31.28■■■□□ 2.6
COL13A1-214ENST00000522165 ERVV-1B6SEH8 477 aa31.28■■■□□ 2.6
COL13A1-214ENST00000522165 LRRC24Q50LG9 513 aa31.28■■■□□ 2.6
COL13A1-214ENST00000522165 TNPO1Q92973 898 aaKnown RBP31.28■■■□□ 2.6
COL13A1-214ENST00000522165 CDHR2Q9BYE9 1310 aa31.27■■■□□ 2.6
COL13A1-214ENST00000522165 NMIQ13287 307 aaPredicted RBP31.27■■■□□ 2.6
COL13A1-214ENST00000522165 SNRKQ9NRH2 765 aa31.27■■■□□ 2.6
COL13A1-214ENST00000522165 SNX14Q9Y5W7 946 aa31.27■■■□□ 2.6
COL13A1-214ENST00000522165 CSF1RP07333 972 aa31.26■■■□□ 2.6
COL13A1-214ENST00000522165 GPTP24298 496 aa31.26■■■□□ 2.6
COL13A1-214ENST00000522165 FAM227BQ96M60 508 aa31.26■■■□□ 2.6
COL13A1-214ENST00000522165 PTH1RQ03431 593 aa31.26■■■□□ 2.59
COL13A1-214ENST00000522165 GSE1Q14687 1217 aa31.26■■■□□ 2.59
COL13A1-214ENST00000522165 CCDC57Q2TAC2 916 aa31.26■■■□□ 2.59
COL13A1-214ENST00000522165 DZIP3Q86Y13 1208 aaKnown RBP31.26■■■□□ 2.59
COL13A1-214ENST00000522165 NUP98P52948 1817 aa31.25■■■□□ 2.59
COL13A1-214ENST00000522165 JCADQ9P266 1359 aa31.25■■■□□ 2.59
COL13A1-214ENST00000522165 CWC22Q9HCG8 908 aaKnown RBP31.25■■■□□ 2.59
COL13A1-214ENST00000522165 INTS5Q6P9B9 1019 aaKnown RBP31.24■■■□□ 2.59
COL13A1-214ENST00000522165 TMX3Q96JJ7 454 aa31.24■■■□□ 2.59
COL13A1-214ENST00000522165 HAUS7Q99871 368 aa31.24■■■□□ 2.59
COL13A1-214ENST00000522165 PUS3Q9BZE2 481 aaKnown RBP31.24■■■□□ 2.59
COL13A1-214ENST00000522165 UPF3BQ9BZI7 483 aaKnown RBP31.24■■■□□ 2.59
COL13A1-214ENST00000522165 FBXO3Q9UK99 471 aa31.24■■■□□ 2.59
COL13A1-214ENST00000522165 TBC1D2BQ9UPU7 963 aa31.24■■■□□ 2.59
COL13A1-214ENST00000522165 LOC102724428A0A0B4J2F2 783 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 ATP6V1AP38606 617 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 EIF5P55010 431 aaKnown RBP31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms