RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 PNPLA7Q6ZV29 1317 aa17.16■□□□□ 0.34
SPIDR-214ENST00000521550 SALL3Q9BXA9 1300 aa17.16■□□□□ 0.34
SPIDR-214ENST00000521550 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
SPIDR-214ENST00000521550 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
SPIDR-214ENST00000521550 MTX1Q13505 466 aa17.15■□□□□ 0.34
SPIDR-214ENST00000521550 SGIP1Q9BQI5 828 aa17.15■□□□□ 0.34
SPIDR-214ENST00000521550 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
SPIDR-214ENST00000521550 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.34
SPIDR-214ENST00000521550 GPATCH3Q96I76 525 aa17.14■□□□□ 0.34
SPIDR-214ENST00000521550 GBP4Q96PP9 640 aa17.14■□□□□ 0.34
SPIDR-214ENST00000521550 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.33
SPIDR-214ENST00000521550 NBPF7P0C2Y1 421 aaPredicted RBP17.14■□□□□ 0.33
SPIDR-214ENST00000521550 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
SPIDR-214ENST00000521550 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
SPIDR-214ENST00000521550 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
SPIDR-214ENST00000521550 MCM4P33991 863 aa17.13■□□□□ 0.33
SPIDR-214ENST00000521550 RIC3Q7Z5B4 369 aa17.13■□□□□ 0.33
SPIDR-214ENST00000521550 UTRNP46939 3433 aa17.13■□□□□ 0.33
SPIDR-214ENST00000521550 ANXA1P04083 346 aa17.12■□□□□ 0.33
SPIDR-214ENST00000521550 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
SPIDR-214ENST00000521550 FMNL2Q96PY5 1086 aa17.12■□□□□ 0.33
SPIDR-214ENST00000521550 MCM2P49736 904 aa17.12■□□□□ 0.33
SPIDR-214ENST00000521550 CABP4P57796 275 aa17.12■□□□□ 0.33
SPIDR-214ENST00000521550 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
SPIDR-214ENST00000521550 ARXQ96QS3 562 aa17.12■□□□□ 0.33
SPIDR-214ENST00000521550 ESYT1Q9BSJ8 1104 aa17.12■□□□□ 0.33
SPIDR-214ENST00000521550 FHDC1Q9C0D6 1143 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-214ENST00000521550 GRM8O00222 908 aa17.11■□□□□ 0.33
SPIDR-214ENST00000521550 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
SPIDR-214ENST00000521550 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
SPIDR-214ENST00000521550 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
SPIDR-214ENST00000521550 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 MRC1P22897 1456 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 POLD1P28340 1107 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 DDIT3P35638 169 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 ANAPC15P60006 121 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 SYT17Q9BSW7 474 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 UTYO14607 1347 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 CHMLP26374 656 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 SIK1P57059 783 aa17.1■□□□□ 0.33
SPIDR-214ENST00000521550 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
SPIDR-214ENST00000521550 GOLGA6L22H0YM25 854 aa17.09■□□□□ 0.33
SPIDR-214ENST00000521550 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
SPIDR-214ENST00000521550 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
SPIDR-214ENST00000521550 COL23A1Q86Y22 540 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-214ENST00000521550 GLRX3O76003 335 aaKnown RBP17.08■□□□□ 0.33
SPIDR-214ENST00000521550 SLC39A6Q13433 755 aa17.08■□□□□ 0.33
SPIDR-214ENST00000521550 FLAD1Q8NFF5 587 aa17.08■□□□□ 0.33
SPIDR-214ENST00000521550 AK7Q96M32 723 aa17.08■□□□□ 0.33
SPIDR-214ENST00000521550 NUCB2P80303 420 aa17.07■□□□□ 0.32
SPIDR-214ENST00000521550 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPIDR-214ENST00000521550 RAB3GAP1Q15042 981 aa17.07■□□□□ 0.32
SPIDR-214ENST00000521550 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
SPIDR-214ENST00000521550 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
SPIDR-214ENST00000521550 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
SPIDR-214ENST00000521550 ERBB4Q15303 1308 aa17.07■□□□□ 0.32
SPIDR-214ENST00000521550 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
SPIDR-214ENST00000521550 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
SPIDR-214ENST00000521550 SKOR2Q2VWA4 1001 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-214ENST00000521550 ANO2Q9NQ90 1003 aa17.07■□□□□ 0.32
SPIDR-214ENST00000521550 ATG3Q9NT62 314 aa17.07■□□□□ 0.32
SPIDR-214ENST00000521550 ATP6V1AP38606 617 aa17.06■□□□□ 0.32
SPIDR-214ENST00000521550 PDIA6Q15084 440 aa17.06■□□□□ 0.32
SPIDR-214ENST00000521550 L1TD1Q5T7N2 865 aaKnown RBP17.06■□□□□ 0.32
SPIDR-214ENST00000521550 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
SPIDR-214ENST00000521550 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
SPIDR-214ENST00000521550 METTL22Q9BUU2 404 aaPredicted RBP17.06■□□□□ 0.32
SPIDR-214ENST00000521550 GOLGB1Q14789 3259 aaKnown RBP17.06■□□□□ 0.32
SPIDR-214ENST00000521550 PRAMEF22A3QJZ6 481 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 MYL6BP14649 208 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 CWF19L2Q2TBE0 894 aaKnown RBP17.05■□□□□ 0.32
SPIDR-214ENST00000521550 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 COPS6Q7L5N1 327 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 LINC00116Q8NCU8 138 aa17.05■□□□□ 0.32
SPIDR-214ENST00000521550 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
SPIDR-214ENST00000521550 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
SPIDR-214ENST00000521550 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
SPIDR-214ENST00000521550 ITPK1Q13572 414 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 PI4K2BQ8TCG2 481 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 TNPO1Q92973 898 aaKnown RBP17.03■□□□□ 0.32
SPIDR-214ENST00000521550 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 NEURL1BA8MQ27 555 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 HIP1O00291 1037 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 TRAK2O60296 914 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 PHF14O94880 888 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 MSL1Q68DK7 614 aa17.03■□□□□ 0.32
SPIDR-214ENST00000521550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.31
SPIDR-214ENST00000521550 GCKRQ14397 625 aa17.02■□□□□ 0.31
SPIDR-214ENST00000521550 SUCLG2Q96I99 432 aa17.02■□□□□ 0.31
SPIDR-214ENST00000521550 MYD88Q99836 296 aa17.02■□□□□ 0.31
SPIDR-214ENST00000521550 SSFA2P28290 1259 aa17.01■□□□□ 0.31
SPIDR-214ENST00000521550 NEK4P51957 841 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms