RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TEP1Q99973 2627 aaKnown RBP5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 SUPT5HO00267 1087 aaKnown RBP5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 FARP2O94887 1054 aaPredicted RBP5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 SCNN1DP51172 638 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 DDR1Q08345 913 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 FAM117BQ6P1L5 589 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 POTEEQ6S8J3 1075 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 DLK2Q6UY11 383 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 LINC00116Q8NCU8 138 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 SH3TC2Q8TF17 1288 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 ERO1AQ96HE7 468 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 FAM86C1Q9NVL1 165 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 PTCH2Q9Y6C5 1203 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 ASPMQ8IZT6 3477 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 ADGRB1O14514 1584 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 NCOR2Q9Y618 2525 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 SOWAHBA6NEL2 793 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 KCNQ1P51787 676 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 CDC37L1Q7L3B6 337 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 TMEFF1Q8IYR6 380 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 ABTB2Q8N961 1025 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 NKX2-3Q8TAU0 364 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 SPATA18Q8TC71 538 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 TRPM4Q8TD43 1214 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 GJA3Q9Y6H8 435 aa5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 MAP1BP46821 2468 aaKnown RBP5.19□□□□□ -1.58
SCARNA13-201ENST00000516672 GJA8P48165 433 aa5.18□□□□□ -1.58
SCARNA13-201ENST00000516672 TM4SF4P48230 202 aa5.18□□□□□ -1.58
SCARNA13-201ENST00000516672 MTFR1Q15390 333 aa5.18□□□□□ -1.58
SCARNA13-201ENST00000516672 TRAPPC3LQ5T215 181 aa5.18□□□□□ -1.58
SCARNA13-201ENST00000516672 C2CD5Q86YS7 1000 aa5.18□□□□□ -1.58
SCARNA13-201ENST00000516672 CHAMP1Q96JM3 812 aa5.18□□□□□ -1.58
SCARNA13-201ENST00000516672 MRC1P22897 1456 aa5.18□□□□□ -1.58
SCARNA13-201ENST00000516672 TJP1Q07157 1748 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 MYO15AQ9UKN7 3530 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 DNAH12Q6ZR08 3092 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 FZD9O00144 591 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 CAMTA2O94983 1202 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 CAP1Q01518 475 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 PRKG1Q13976 671 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 GRIN2CQ14957 1233 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 CCDC85BQ15834 202 aaPredicted RBP5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 PRR23BQ6ZRT6 265 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 ASCL5Q7RTU5 278 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 USP48Q86UV5 1035 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 RMDN1Q96DB5 314 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 SRPK3Q9UPE1 567 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 ZFHX2Q9C0A1 2572 aaPredicted RBP5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 COL4A3Q01955 1670 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 COL4A6Q14031 1691 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 ALPK3Q96L96 1907 aa5.17□□□□□ -1.58
SCARNA13-201ENST00000516672 TFF2Q03403 129 aa5.16□□□□□ -1.58
SCARNA13-201ENST00000516672 ARHGEF1Q92888 912 aaKnown RBP5.16□□□□□ -1.58
SCARNA13-201ENST00000516672 CXXC1Q9P0U4 656 aaPredicted RBP5.16□□□□□ -1.58
SCARNA13-201ENST00000516672 PGAP2Q9UHJ9 254 aa5.16□□□□□ -1.58
SCARNA13-201ENST00000516672 TRPC6Q9Y210 931 aa5.16□□□□□ -1.58
SCARNA13-201ENST00000516672 BCORQ6W2J9 1755 aa5.16□□□□□ -1.58
SCARNA13-201ENST00000516672 ABCC11Q96J66 1382 aa5.16□□□□□ -1.58
SCARNA13-201ENST00000516672 RGPD5Q99666 1765 aa5.15□□□□□ -1.58
SCARNA13-201ENST00000516672 H0YIN7 160 aa5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 POLRMTO00411 1230 aaKnown RBP5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 VGFO15240 615 aaPredicted RBP5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 RFC4P35249 363 aa5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 NLRP13Q86W25 1043 aa5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 ZKSCAN4Q969J2 545 aaPredicted RBP5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 ZNF277Q9NRM2 450 aaPredicted RBP5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 ADARB2Q9NS39 739 aaKnown RBP5.15□□□□□ -1.59
SCARNA13-201ENST00000516672 MDM2Q00987 491 aaPredicted RBP5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 TCF15Q12870 199 aa5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 SAFB2Q14151 953 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 FKBP8Q14318 412 aa5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 AAK1Q2M2I8 961 aa5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 AKNAD1Q5T1N1 836 aa5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 ZNF622Q969S3 477 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 RTCBQ9Y3I0 505 aaKnown RBP5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 BPTFQ12830 3046 aa5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 KDM3BQ7LBC6 1761 aa5.14□□□□□ -1.59
SCARNA13-201ENST00000516672 GJB1P08034 283 aa5.13□□□□□ -1.59
SCARNA13-201ENST00000516672 SREBF2Q12772 1141 aa5.13□□□□□ -1.59
SCARNA13-201ENST00000516672 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCARNA13-201ENST00000516672 CD320Q9NPF0 282 aa5.13□□□□□ -1.59
SCARNA13-201ENST00000516672 POLR3AO14802 1390 aaPredicted RBP5.13□□□□□ -1.59
SCARNA13-201ENST00000516672 USP31Q70CQ4 1352 aa5.13□□□□□ -1.59
SCARNA13-201ENST00000516672 CPSF1Q10570 1443 aaKnown RBP5.13□□□□□ -1.59
SCARNA13-201ENST00000516672 SSC5DA1L4H1 1573 aa5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 ZNF646O15015 1829 aaPredicted RBP5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 DMDP11532 3685 aa5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 PRR23AA6NEV1 266 aa5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 EIF6P56537 245 aaKnown RBP5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 MKRN3Q13064 507 aaKnown RBP5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 PDE3AQ14432 1141 aa5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 IER5LQ5T953 404 aa5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 HFE2Q6ZVN8 426 aa5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 U2AF1L4Q8WU68 220 aaKnown RBP5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 ZC3H15Q8WU90 426 aaKnown RBP5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 TSPYL2Q9H2G4 693 aaPredicted RBP5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 NLRP2Q9NX02 1062 aa5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 ZBTB12Q9Y330 459 aaPredicted RBP5.12□□□□□ -1.59
SCARNA13-201ENST00000516672 ANKRD26Q9UPS8 1709 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 PTPN13Q12923 2485 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms